RNA–Protein interactions for RNA: ENST00000547148.5

PFKM-208, Transcript of phosphofructokinase, muscle, humanhuman

TSL 3

Gene PFKM, Length 775 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-208ENST00000547148 NEXMIFQ5QGS0 1516 aa17.25■□□□□ 0.35
PFKM-208ENST00000547148 ZFYVE9O95405 1425 aa17.24■□□□□ 0.35
PFKM-208ENST00000547148 L3MBTL2Q969R5 705 aa17.24■□□□□ 0.35
PFKM-208ENST00000547148 STAG3Q9UJ98 1225 aa17.24■□□□□ 0.35
PFKM-208ENST00000547148 TIMELESSQ9UNS1 1208 aa17.24■□□□□ 0.35
PFKM-208ENST00000547148 ARHGAP23Q9P227 1491 aa17.24■□□□□ 0.35
PFKM-208ENST00000547148 MYO5BQ9ULV0 1848 aa17.24■□□□□ 0.35
PFKM-208ENST00000547148 SLIT1O75093 1534 aa17.23■□□□□ 0.35
PFKM-208ENST00000547148 IFT172Q9UG01 1749 aa17.23■□□□□ 0.35
PFKM-208ENST00000547148 TMEM2Q9UHN6 1383 aa17.23■□□□□ 0.35
PFKM-208ENST00000547148 ZNF326Q5BKZ1 582 aaKnown RBP17.22■□□□□ 0.35
PFKM-208ENST00000547148 MYOM2P54296 1465 aa17.22■□□□□ 0.35
PFKM-208ENST00000547148 RPGRIP1LQ68CZ1 1315 aa17.21■□□□□ 0.35
PFKM-208ENST00000547148 LTBP4Q8N2S1 1624 aa17.21■□□□□ 0.35
PFKM-208ENST00000547148 RIMS2Q9UQ26 1411 aa17.21■□□□□ 0.34
PFKM-208ENST00000547148 PPLO60437 1756 aa17.2■□□□□ 0.34
PFKM-208ENST00000547148 THEMISQ8N1K5 641 aaPredicted RBP17.2■□□□□ 0.34
PFKM-208ENST00000547148 NRXN1Q9ULB1 1477 aa17.19■□□□□ 0.34
PFKM-208ENST00000547148 DCAF11Q8TEB1 546 aa17.18■□□□□ 0.34
PFKM-208ENST00000547148 UBAP1LF5GYI3 381 aa17.17■□□□□ 0.34
PFKM-208ENST00000547148 PRAG1Q86YV5 1406 aa17.16■□□□□ 0.34
PFKM-208ENST00000547148 PIK3C2GO75747 1445 aa17.15■□□□□ 0.34
PFKM-208ENST00000547148 STAC3Q96MF2 364 aa17.15■□□□□ 0.34
PFKM-208ENST00000547148 SCAF11Q99590 1463 aaKnown RBP17.15■□□□□ 0.34
PFKM-208ENST00000547148 ADGRF5Q8IZF2 1346 aa17.15■□□□□ 0.34
PFKM-208ENST00000547148 PPP1R15AO75807 674 aaPredicted RBP17.14■□□□□ 0.33
PFKM-208ENST00000547148 LTKP29376 864 aa17.14■□□□□ 0.33
PFKM-208ENST00000547148 NUTM2DQ5VT03 806 aaPredicted RBP17.14■□□□□ 0.33
PFKM-208ENST00000547148 ZEB1P37275 1124 aaPredicted RBP17.13■□□□□ 0.33
PFKM-208ENST00000547148 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.13■□□□□ 0.33
PFKM-208ENST00000547148 KDM2AQ9Y2K7 1162 aa17.13■□□□□ 0.33
PFKM-208ENST00000547148 VGFO15240 615 aaPredicted RBP17.12■□□□□ 0.33
PFKM-208ENST00000547148 SETBP1Q9Y6X0 1596 aa17.11■□□□□ 0.33
PFKM-208ENST00000547148 NBPF8Q3BBV2 869 aa17.11■□□□□ 0.33
PFKM-208ENST00000547148 TXNDC2Q86VQ3 553 aa17.11■□□□□ 0.33
PFKM-208ENST00000547148 PLEKHG1Q9ULL1 1385 aa17.11■□□□□ 0.33
PFKM-208ENST00000547148 HDGFP51858 240 aaKnown RBP17.1■□□□□ 0.33
PFKM-208ENST00000547148 EID1Q9Y6B2 187 aa17.1■□□□□ 0.33
PFKM-208ENST00000547148 NRXN3Q9Y4C0 1643 aa17.1■□□□□ 0.33
PFKM-208ENST00000547148 MED14O60244 1454 aa17.09■□□□□ 0.33
PFKM-208ENST00000547148 POLR1AO95602 1720 aaPredicted RBP17.08■□□□□ 0.32
PFKM-208ENST00000547148 ANKLE2Q86XL3 938 aa17.08■□□□□ 0.32
PFKM-208ENST00000547148 RALGAPBQ86X10 1494 aa17.07■□□□□ 0.32
PFKM-208ENST00000547148 ADAMTS13Q76LX8 1427 aa17.07■□□□□ 0.32
PFKM-208ENST00000547148 IQGAP1P46940 1657 aa17.07■□□□□ 0.32
PFKM-208ENST00000547148 TRPM1Q7Z4N2 1603 aa17.07■□□□□ 0.32
PFKM-208ENST00000547148 NPHP4O75161 1426 aaPredicted RBP17.05■□□□□ 0.32
PFKM-208ENST00000547148 KIAA1210Q9ULL0 1709 aa17.05■□□□□ 0.32
PFKM-208ENST00000547148 NCKAP5LQ9HCH0 1330 aa17.05■□□□□ 0.32
PFKM-208ENST00000547148 LAMC1P11047 1609 aa17.05■□□□□ 0.32
PFKM-208ENST00000547148 ALKQ9UM73 1620 aa17.05■□□□□ 0.32
PFKM-208ENST00000547148 MED1Q15648 1581 aaPredicted RBP17.05■□□□□ 0.32
PFKM-208ENST00000547148 ASXL1Q8IXJ9 1541 aa17.05■□□□□ 0.32
PFKM-208ENST00000547148 SETD1AO15047 1707 aaKnown RBP17.04■□□□□ 0.32
PFKM-208ENST00000547148 PHF23Q9BUL5 403 aaPredicted RBP17.04■□□□□ 0.32
PFKM-208ENST00000547148 C14orf93Q9H972 538 aaKnown RBP17.04■□□□□ 0.32
PFKM-208ENST00000547148 ADGRB1O14514 1584 aa17.03■□□□□ 0.32
PFKM-208ENST00000547148 DIP2AQ14689 1571 aa17.03■□□□□ 0.32
PFKM-208ENST00000547148 CFAP70Q5T0N1 1121 aa17.03■□□□□ 0.32
PFKM-208ENST00000547148 GPRASP1Q5JY77 1395 aa17.02■□□□□ 0.32
PFKM-208ENST00000547148 ZNF335Q9H4Z2 1342 aaPredicted RBP17.02■□□□□ 0.32
PFKM-208ENST00000547148 SENP3Q9H4L4 574 aaPredicted RBP17.02■□□□□ 0.32
PFKM-208ENST00000547148 SCAF1Q9H7N4 1312 aaKnown RBP17.01■□□□□ 0.31
PFKM-208ENST00000547148 HSPA1LP34931 641 aa17■□□□□ 0.31
PFKM-208ENST00000547148 NBPF1Q3BBV0 1214 aa17■□□□□ 0.31
PFKM-208ENST00000547148 ROCK2O75116 1388 aaKnown RBP17■□□□□ 0.31
PFKM-208ENST00000547148 METP08581 1390 aa16.99■□□□□ 0.31
PFKM-208ENST00000547148 BCANQ96GW7 911 aa16.98■□□□□ 0.31
PFKM-208ENST00000547148 SLC26A8Q96RN1 970 aa16.98■□□□□ 0.31
PFKM-208ENST00000547148 TBX22Q9Y458 520 aa16.97■□□□□ 0.31
PFKM-208ENST00000547148 PIK3R4Q99570 1358 aa16.95■□□□□ 0.3
PFKM-208ENST00000547148 PIP4K2BP78356 416 aa16.95■□□□□ 0.3
PFKM-208ENST00000547148 TMEM132EQ6IEE7 984 aa16.95■□□□□ 0.3
PFKM-208ENST00000547148 YTHDC2Q9H6S0 1430 aaKnown RBP16.95■□□□□ 0.3
PFKM-208ENST00000547148 TOM1O60784 492 aa16.94■□□□□ 0.3
PFKM-208ENST00000547148 PTPRUQ92729 1446 aa16.94■□□□□ 0.3
PFKM-208ENST00000547148 LRPPRCP42704 1394 aaKnown RBP16.93■□□□□ 0.3
PFKM-208ENST00000547148 CARD11Q9BXL7 1154 aa16.93■□□□□ 0.3
PFKM-208ENST00000547148 TECPR2O15040 1411 aa16.93■□□□□ 0.3
PFKM-208ENST00000547148 NWD1Q149M9 1564 aa16.92■□□□□ 0.3
PFKM-208ENST00000547148 XRN1Q8IZH2 1706 aaKnown RBP16.92■□□□□ 0.3
PFKM-208ENST00000547148 ABCC11Q96J66 1382 aa16.9■□□□□ 0.3
PFKM-208ENST00000547148 USP47Q96K76 1375 aa16.9■□□□□ 0.3
PFKM-208ENST00000547148 CPS1P31327 1500 aa16.9■□□□□ 0.3
PFKM-208ENST00000547148 DLC1Q96QB1 1528 aa16.9■□□□□ 0.3
PFKM-208ENST00000547148 KNDC1Q76NI1 1749 aa16.9■□□□□ 0.3
PFKM-208ENST00000547148 PTCH1Q13635 1447 aa16.88■□□□□ 0.29
PFKM-208ENST00000547148 ARHGEF28Q8N1W1 1705 aaKnown RBP16.87■□□□□ 0.29
PFKM-208ENST00000547148 STK26Q9P289 416 aa16.87■□□□□ 0.29
PFKM-208ENST00000547148 ROBO2Q9HCK4 1378 aa16.87■□□□□ 0.29
PFKM-208ENST00000547148 TRAK1Q9UPV9 953 aa16.86■□□□□ 0.29
PFKM-208ENST00000547148 AMOTL2Q9Y2J4 779 aa16.86■□□□□ 0.29
PFKM-208ENST00000547148 CHD2O14647 1828 aaKnown RBP16.86■□□□□ 0.29
PFKM-208ENST00000547148 EIF3AQ14152 1382 aaKnown RBP16.86■□□□□ 0.29
PFKM-208ENST00000547148 KCNA6P17658 529 aa16.85■□□□□ 0.29
PFKM-208ENST00000547148 FAM135BQ49AJ0 1406 aa16.85■□□□□ 0.29
PFKM-208ENST00000547148 NKTRP30414 1462 aaKnown RBP16.85■□□□□ 0.29
PFKM-208ENST00000547148 EIF4G2P78344 907 aaKnown RBP eCLIP16.83■□□□□ 0.28
PFKM-208ENST00000547148 SIRT1Q96EB6 747 aa16.83■□□□□ 0.28
PFKM-208ENST00000547148 PLEKHH1Q9ULM0 1364 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms