RNA–Protein interactions for RNA: ENST00000546843.2

R3HDM2-209, Transcript of R3H domain containing 2, humanhuman

TSL 5

Gene R3HDM2, Length 823 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-209ENST00000546843 FBXO41Q8TF61 875 aa24.97■■□□□ 1.59
R3HDM2-209ENST00000546843 NUTM2DQ5VT03 806 aaPredicted RBP24.95■■□□□ 1.58
R3HDM2-209ENST00000546843 PPP1R15AO75807 674 aaPredicted RBP24.93■■□□□ 1.58
R3HDM2-209ENST00000546843 MPHOSPH9Q99550 1183 aa24.93■■□□□ 1.58
R3HDM2-209ENST00000546843 BCANQ96GW7 911 aa24.91■■□□□ 1.58
R3HDM2-209ENST00000546843 SLC26A8Q96RN1 970 aa24.9■■□□□ 1.58
R3HDM2-209ENST00000546843 CPS1P31327 1500 aa24.89■■□□□ 1.57
R3HDM2-209ENST00000546843 ZNF326Q5BKZ1 582 aaKnown RBP24.88■■□□□ 1.57
R3HDM2-209ENST00000546843 PLEKHG1Q9ULL1 1385 aa24.88■■□□□ 1.57
R3HDM2-209ENST00000546843 STRCP1A6NGW2 1772 aa24.86■■□□□ 1.57
R3HDM2-209ENST00000546843 IQSEC2Q5JU85 1478 aa24.86■■□□□ 1.57
R3HDM2-209ENST00000546843 HDGFP51858 240 aaKnown RBP24.86■■□□□ 1.57
R3HDM2-209ENST00000546843 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.86■■□□□ 1.57
R3HDM2-209ENST00000546843 ACIN1Q9UKV3 1341 aaKnown RBP24.81■■□□□ 1.56
R3HDM2-209ENST00000546843 CCDC144AA2RUR9 1427 aa24.8■■□□□ 1.56
R3HDM2-209ENST00000546843 KIF1BO60333 1816 aa24.8■■□□□ 1.56
R3HDM2-209ENST00000546843 NEXMIFQ5QGS0 1516 aa24.8■■□□□ 1.56
R3HDM2-209ENST00000546843 LRRC7Q96NW7 1537 aa24.79■■□□□ 1.56
R3HDM2-209ENST00000546843 ADAMTS13Q76LX8 1427 aa24.78■■□□□ 1.56
R3HDM2-209ENST00000546843 UBAP1LF5GYI3 381 aa24.75■■□□□ 1.55
R3HDM2-209ENST00000546843 KCNA6P17658 529 aa24.74■■□□□ 1.55
R3HDM2-209ENST00000546843 NWD1Q149M9 1564 aa24.74■■□□□ 1.55
R3HDM2-209ENST00000546843 NRXN3Q9Y4C0 1643 aa24.72■■□□□ 1.55
R3HDM2-209ENST00000546843 DIP2AQ14689 1571 aa24.72■■□□□ 1.55
R3HDM2-209ENST00000546843 HRCP23327 699 aa24.72■■□□□ 1.55
R3HDM2-209ENST00000546843 TBX22Q9Y458 520 aa24.72■■□□□ 1.55
R3HDM2-209ENST00000546843 SETBP1Q9Y6X0 1596 aa24.71■■□□□ 1.55
R3HDM2-209ENST00000546843 RGL3Q3MIN7 710 aa24.71■■□□□ 1.55
R3HDM2-209ENST00000546843 RBM33Q96EV2 1170 aaKnown RBP24.71■■□□□ 1.55
R3HDM2-209ENST00000546843 SPATA31E1Q6ZUB1 1445 aa24.7■■□□□ 1.55
R3HDM2-209ENST00000546843 NKTRP30414 1462 aaKnown RBP24.69■■□□□ 1.54
R3HDM2-209ENST00000546843 TMEM94Q12767 1356 aa24.67■■□□□ 1.54
R3HDM2-209ENST00000546843 PROSER2Q86WR7 435 aaPredicted RBP24.67■■□□□ 1.54
R3HDM2-209ENST00000546843 RPGRIP1LQ68CZ1 1315 aa24.66■■□□□ 1.54
R3HDM2-209ENST00000546843 ANKRD30BQ9BXX2 1392 aa24.66■■□□□ 1.54
R3HDM2-209ENST00000546843 SCAF1Q9H7N4 1312 aaKnown RBP24.65■■□□□ 1.54
R3HDM2-209ENST00000546843 PTPRUQ92729 1446 aa24.65■■□□□ 1.54
R3HDM2-209ENST00000546843 PPLO60437 1756 aa24.65■■□□□ 1.54
R3HDM2-209ENST00000546843 ALKQ9UM73 1620 aa24.64■■□□□ 1.54
R3HDM2-209ENST00000546843 XIRP1Q702N8 1843 aaKnown RBP24.64■■□□□ 1.54
R3HDM2-209ENST00000546843 VGFO15240 615 aaPredicted RBP24.64■■□□□ 1.54
R3HDM2-209ENST00000546843 PIP4K2BP78356 416 aa24.64■■□□□ 1.54
R3HDM2-209ENST00000546843 METP08581 1390 aa24.64■■□□□ 1.53
R3HDM2-209ENST00000546843 CHD2O14647 1828 aaKnown RBP24.63■■□□□ 1.53
R3HDM2-209ENST00000546843 PIK3R4Q99570 1358 aa24.63■■□□□ 1.53
R3HDM2-209ENST00000546843 TOM1O60784 492 aa24.62■■□□□ 1.53
R3HDM2-209ENST00000546843 ADGRF5Q8IZF2 1346 aa24.61■■□□□ 1.53
R3HDM2-209ENST00000546843 AMOTL2Q9Y2J4 779 aa24.6■■□□□ 1.53
R3HDM2-209ENST00000546843 IFT172Q9UG01 1749 aa24.58■■□□□ 1.52
R3HDM2-209ENST00000546843 XRN1Q8IZH2 1706 aaKnown RBP24.56■■□□□ 1.52
R3HDM2-209ENST00000546843 TRIM26Q12899 539 aaPredicted RBP24.56■■□□□ 1.52
R3HDM2-209ENST00000546843 SETD1AO15047 1707 aaKnown RBP24.55■■□□□ 1.52
R3HDM2-209ENST00000546843 MSH6P52701 1360 aa24.53■■□□□ 1.52
R3HDM2-209ENST00000546843 C14orf37Q86TY3 774 aa24.52■■□□□ 1.52
R3HDM2-209ENST00000546843 PIK3C2GO75747 1445 aa24.51■■□□□ 1.51
R3HDM2-209ENST00000546843 MYOM2P54296 1465 aa24.49■■□□□ 1.51
R3HDM2-209ENST00000546843 ASXL1Q8IXJ9 1541 aa24.46■■□□□ 1.51
R3HDM2-209ENST00000546843 NCOA3Q9Y6Q9 1424 aa24.46■■□□□ 1.51
R3HDM2-209ENST00000546843 HSPA1LP34931 641 aa24.46■■□□□ 1.51
R3HDM2-209ENST00000546843 NRXN1Q9ULB1 1477 aa24.45■■□□□ 1.5
R3HDM2-209ENST00000546843 ROBO2Q9HCK4 1378 aa24.44■■□□□ 1.5
R3HDM2-209ENST00000546843 TMEM132EQ6IEE7 984 aa24.43■■□□□ 1.5
R3HDM2-209ENST00000546843 KDM2AQ9Y2K7 1162 aa24.43■■□□□ 1.5
R3HDM2-209ENST00000546843 PTCH1Q13635 1447 aa24.43■■□□□ 1.5
R3HDM2-209ENST00000546843 DCAF11Q8TEB1 546 aa24.42■■□□□ 1.5
R3HDM2-209ENST00000546843 DHX57Q6P158 1386 aaKnown RBP24.42■■□□□ 1.5
R3HDM2-209ENST00000546843 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.41■■□□□ 1.5
R3HDM2-209ENST00000546843 STK26Q9P289 416 aa24.41■■□□□ 1.5
R3HDM2-209ENST00000546843 CFAP70Q5T0N1 1121 aa24.4■■□□□ 1.5
R3HDM2-209ENST00000546843 C19orf44Q9H6X5 657 aa24.4■■□□□ 1.5
R3HDM2-209ENST00000546843 PRAG1Q86YV5 1406 aa24.38■■□□□ 1.49
R3HDM2-209ENST00000546843 ADGRL3Q9HAR2 1447 aa24.38■■□□□ 1.49
R3HDM2-209ENST00000546843 ATF3P18847 181 aa24.38■■□□□ 1.49
R3HDM2-209ENST00000546843 C14orf93Q9H972 538 aaKnown RBP24.38■■□□□ 1.49
R3HDM2-209ENST00000546843 NALCNQ8IZF0 1738 aa24.38■■□□□ 1.49
R3HDM2-209ENST00000546843 ROBO1Q9Y6N7 1651 aa24.37■■□□□ 1.49
R3HDM2-209ENST00000546843 FAM135BQ49AJ0 1406 aa24.37■■□□□ 1.49
R3HDM2-209ENST00000546843 SLAIN2Q9P270 581 aa24.37■■□□□ 1.49
R3HDM2-209ENST00000546843 LRPPRCP42704 1394 aaKnown RBP24.37■■□□□ 1.49
R3HDM2-209ENST00000546843 CADPS2Q86UW7 1296 aa24.36■■□□□ 1.49
R3HDM2-209ENST00000546843 SIN3AQ96ST3 1273 aa24.35■■□□□ 1.49
R3HDM2-209ENST00000546843 LAMC1P11047 1609 aa24.35■■□□□ 1.49
R3HDM2-209ENST00000546843 YTHDC2Q9H6S0 1430 aaKnown RBP24.35■■□□□ 1.49
R3HDM2-209ENST00000546843 DCCP43146 1447 aa24.34■■□□□ 1.49
R3HDM2-209ENST00000546843 TECPR2O15040 1411 aa24.33■■□□□ 1.49
R3HDM2-209ENST00000546843 ABCC11Q96J66 1382 aa24.31■■□□□ 1.48
R3HDM2-209ENST00000546843 PLEKHH1Q9ULM0 1364 aa24.31■■□□□ 1.48
R3HDM2-209ENST00000546843 WAPLQ7Z5K2 1190 aa24.31■■□□□ 1.48
R3HDM2-209ENST00000546843 KNDC1Q76NI1 1749 aa24.3■■□□□ 1.48
R3HDM2-209ENST00000546843 MST1RQ04912 1400 aa24.3■■□□□ 1.48
R3HDM2-209ENST00000546843 NEUROD1Q13562 356 aa24.3■■□□□ 1.48
R3HDM2-209ENST00000546843 ADGRB1O14514 1584 aa24.29■■□□□ 1.48
R3HDM2-209ENST00000546843 STAC3Q96MF2 364 aa24.26■■□□□ 1.47
R3HDM2-209ENST00000546843 BRINP3Q76B58 766 aa24.24■■□□□ 1.47
R3HDM2-209ENST00000546843 L3MBTL2Q969R5 705 aa24.23■■□□□ 1.47
R3HDM2-209ENST00000546843 SAFB2Q14151 953 aaKnown RBP eCLIP24.22■■□□□ 1.47
R3HDM2-209ENST00000546843 PCGF6Q9BYE7 350 aa24.22■■□□□ 1.47
R3HDM2-209ENST00000546843 TRAK1Q9UPV9 953 aa24.22■■□□□ 1.47
R3HDM2-209ENST00000546843 PRAM1Q96QH2 718 aa24.21■■□□□ 1.47
R3HDM2-209ENST00000546843 CDC42BPGQ6DT37 1551 aa24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms