RNA–Protein interactions for RNA: ENST00000546480.1

VENTXP3-201, Transcript of VENT homeobox pseudogene 3, humanhuman

BASIC

Gene VENTXP3, Length 773 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VENTXP3-201ENST00000546480 CERKQ8TCT0 537 aa20.41■□□□□ 0.86
VENTXP3-201ENST00000546480 RIMS2Q9UQ26 1411 aa20.41■□□□□ 0.86
VENTXP3-201ENST00000546480 KIF1BO60333 1816 aa20.41■□□□□ 0.86
VENTXP3-201ENST00000546480 HDGFP51858 240 aaKnown RBP20.39■□□□□ 0.85
VENTXP3-201ENST00000546480 NUTM2DQ5VT03 806 aaPredicted RBP20.39■□□□□ 0.85
VENTXP3-201ENST00000546480 LTBP4Q8N2S1 1624 aa20.38■□□□□ 0.85
VENTXP3-201ENST00000546480 ILDR1Q86SU0 546 aaPredicted RBP20.36■□□□□ 0.85
VENTXP3-201ENST00000546480 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.35■□□□□ 0.85
VENTXP3-201ENST00000546480 ZFYVE9O95405 1425 aa20.35■□□□□ 0.85
VENTXP3-201ENST00000546480 SLC26A8Q96RN1 970 aa20.33■□□□□ 0.85
VENTXP3-201ENST00000546480 CCDC144AA2RUR9 1427 aa20.33■□□□□ 0.84
VENTXP3-201ENST00000546480 CPS1P31327 1500 aa20.31■□□□□ 0.84
VENTXP3-201ENST00000546480 PLEKHG1Q9ULL1 1385 aa20.3■□□□□ 0.84
VENTXP3-201ENST00000546480 FBXO41Q8TF61 875 aa20.29■□□□□ 0.84
VENTXP3-201ENST00000546480 STRCP1A6NGW2 1772 aa20.28■□□□□ 0.84
VENTXP3-201ENST00000546480 NEXMIFQ5QGS0 1516 aa20.27■□□□□ 0.83
VENTXP3-201ENST00000546480 HRCP23327 699 aa20.25■□□□□ 0.83
VENTXP3-201ENST00000546480 IQSEC2Q5JU85 1478 aa20.24■□□□□ 0.83
VENTXP3-201ENST00000546480 RGL3Q3MIN7 710 aa20.24■□□□□ 0.83
VENTXP3-201ENST00000546480 TRIM26Q12899 539 aaPredicted RBP20.23■□□□□ 0.83
VENTXP3-201ENST00000546480 DIP2AQ14689 1571 aa20.22■□□□□ 0.83
VENTXP3-201ENST00000546480 PPLO60437 1756 aa20.21■□□□□ 0.83
VENTXP3-201ENST00000546480 LRRC7Q96NW7 1537 aa20.19■□□□□ 0.82
VENTXP3-201ENST00000546480 UBAP1LF5GYI3 381 aa20.19■□□□□ 0.82
VENTXP3-201ENST00000546480 ADAMTS13Q76LX8 1427 aa20.19■□□□□ 0.82
VENTXP3-201ENST00000546480 VGFO15240 615 aaPredicted RBP20.18■□□□□ 0.82
VENTXP3-201ENST00000546480 KCNA6P17658 529 aa20.18■□□□□ 0.82
VENTXP3-201ENST00000546480 TBX22Q9Y458 520 aa20.18■□□□□ 0.82
VENTXP3-201ENST00000546480 RPGRIP1LQ68CZ1 1315 aa20.18■□□□□ 0.82
VENTXP3-201ENST00000546480 SCAF1Q9H7N4 1312 aaKnown RBP20.18■□□□□ 0.82
VENTXP3-201ENST00000546480 SETBP1Q9Y6X0 1596 aa20.17■□□□□ 0.82
VENTXP3-201ENST00000546480 NRXN3Q9Y4C0 1643 aa20.17■□□□□ 0.82
VENTXP3-201ENST00000546480 CHD2O14647 1828 aaKnown RBP20.17■□□□□ 0.82
VENTXP3-201ENST00000546480 NWD1Q149M9 1564 aa20.17■□□□□ 0.82
VENTXP3-201ENST00000546480 PROSER2Q86WR7 435 aaPredicted RBP20.16■□□□□ 0.82
VENTXP3-201ENST00000546480 RBM33Q96EV2 1170 aaKnown RBP20.15■□□□□ 0.82
VENTXP3-201ENST00000546480 SPATA31E1Q6ZUB1 1445 aa20.15■□□□□ 0.82
VENTXP3-201ENST00000546480 IFT172Q9UG01 1749 aa20.15■□□□□ 0.82
VENTXP3-201ENST00000546480 NKTRP30414 1462 aaKnown RBP20.14■□□□□ 0.81
VENTXP3-201ENST00000546480 ANKRD30BQ9BXX2 1392 aa20.14■□□□□ 0.81
VENTXP3-201ENST00000546480 XIRP1Q702N8 1843 aaKnown RBP20.12■□□□□ 0.81
VENTXP3-201ENST00000546480 TOM1O60784 492 aa20.12■□□□□ 0.81
VENTXP3-201ENST00000546480 PIP4K2BP78356 416 aa20.12■□□□□ 0.81
VENTXP3-201ENST00000546480 TMEM94Q12767 1356 aa20.11■□□□□ 0.81
VENTXP3-201ENST00000546480 C14orf37Q86TY3 774 aa20.11■□□□□ 0.81
VENTXP3-201ENST00000546480 PIK3R4Q99570 1358 aa20.1■□□□□ 0.81
VENTXP3-201ENST00000546480 AMOTL2Q9Y2J4 779 aa20.1■□□□□ 0.81
VENTXP3-201ENST00000546480 ALKQ9UM73 1620 aa20.09■□□□□ 0.81
VENTXP3-201ENST00000546480 METP08581 1390 aa20.08■□□□□ 0.81
VENTXP3-201ENST00000546480 ADGRF5Q8IZF2 1346 aa20.08■□□□□ 0.81
VENTXP3-201ENST00000546480 PTPRUQ92729 1446 aa20.07■□□□□ 0.8
VENTXP3-201ENST00000546480 SETD1AO15047 1707 aaKnown RBP20.06■□□□□ 0.8
VENTXP3-201ENST00000546480 MSH6P52701 1360 aa20.05■□□□□ 0.8
VENTXP3-201ENST00000546480 XRN1Q8IZH2 1706 aaKnown RBP20.05■□□□□ 0.8
VENTXP3-201ENST00000546480 KDM2AQ9Y2K7 1162 aa20.04■□□□□ 0.8
VENTXP3-201ENST00000546480 DCAF11Q8TEB1 546 aa20.03■□□□□ 0.8
VENTXP3-201ENST00000546480 MYOM2P54296 1465 aa20.02■□□□□ 0.8
VENTXP3-201ENST00000546480 PIK3C2GO75747 1445 aa20.01■□□□□ 0.79
VENTXP3-201ENST00000546480 LAMC1P11047 1609 aa19.98■□□□□ 0.79
VENTXP3-201ENST00000546480 DHX57Q6P158 1386 aaKnown RBP19.98■□□□□ 0.79
VENTXP3-201ENST00000546480 NEUROD1Q13562 356 aa19.98■□□□□ 0.79
VENTXP3-201ENST00000546480 STK26Q9P289 416 aa19.98■□□□□ 0.79
VENTXP3-201ENST00000546480 TMEM132EQ6IEE7 984 aa19.97■□□□□ 0.79
VENTXP3-201ENST00000546480 PCGF6Q9BYE7 350 aa19.97■□□□□ 0.79
VENTXP3-201ENST00000546480 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.96■□□□□ 0.79
VENTXP3-201ENST00000546480 NCOA3Q9Y6Q9 1424 aa19.95■□□□□ 0.78
VENTXP3-201ENST00000546480 ATF3P18847 181 aa19.95■□□□□ 0.78
VENTXP3-201ENST00000546480 CFAP70Q5T0N1 1121 aa19.95■□□□□ 0.78
VENTXP3-201ENST00000546480 SIN3AQ96ST3 1273 aa19.95■□□□□ 0.78
VENTXP3-201ENST00000546480 NRXN1Q9ULB1 1477 aa19.94■□□□□ 0.78
VENTXP3-201ENST00000546480 PTCH1Q13635 1447 aa19.93■□□□□ 0.78
VENTXP3-201ENST00000546480 ASXL1Q8IXJ9 1541 aa19.93■□□□□ 0.78
VENTXP3-201ENST00000546480 NALCNQ8IZF0 1738 aa19.93■□□□□ 0.78
VENTXP3-201ENST00000546480 ROBO1Q9Y6N7 1651 aa19.92■□□□□ 0.78
VENTXP3-201ENST00000546480 C19orf44Q9H6X5 657 aa19.92■□□□□ 0.78
VENTXP3-201ENST00000546480 ROBO2Q9HCK4 1378 aa19.92■□□□□ 0.78
VENTXP3-201ENST00000546480 KNDC1Q76NI1 1749 aa19.91■□□□□ 0.78
VENTXP3-201ENST00000546480 CADPS2Q86UW7 1296 aa19.91■□□□□ 0.78
VENTXP3-201ENST00000546480 C14orf93Q9H972 538 aaKnown RBP19.91■□□□□ 0.78
VENTXP3-201ENST00000546480 HSPA1LP34931 641 aa19.9■□□□□ 0.78
VENTXP3-201ENST00000546480 YTHDC2Q9H6S0 1430 aaKnown RBP19.9■□□□□ 0.78
VENTXP3-201ENST00000546480 LRPPRCP42704 1394 aaKnown RBP19.89■□□□□ 0.77
VENTXP3-201ENST00000546480 STAC3Q96MF2 364 aa19.89■□□□□ 0.77
VENTXP3-201ENST00000546480 ADGRL3Q9HAR2 1447 aa19.89■□□□□ 0.77
VENTXP3-201ENST00000546480 SLAIN2Q9P270 581 aa19.89■□□□□ 0.77
VENTXP3-201ENST00000546480 WAPLQ7Z5K2 1190 aa19.86■□□□□ 0.77
VENTXP3-201ENST00000546480 DCCP43146 1447 aa19.85■□□□□ 0.77
VENTXP3-201ENST00000546480 FAM135BQ49AJ0 1406 aa19.85■□□□□ 0.77
VENTXP3-201ENST00000546480 PRAG1Q86YV5 1406 aa19.85■□□□□ 0.77
VENTXP3-201ENST00000546480 TECPR2O15040 1411 aa19.84■□□□□ 0.77
VENTXP3-201ENST00000546480 ABCC11Q96J66 1382 aa19.83■□□□□ 0.77
VENTXP3-201ENST00000546480 SAFB2Q14151 953 aaKnown RBP eCLIP19.83■□□□□ 0.77
VENTXP3-201ENST00000546480 L3MBTL2Q969R5 705 aa19.83■□□□□ 0.77
VENTXP3-201ENST00000546480 TRAK1Q9UPV9 953 aa19.83■□□□□ 0.77
VENTXP3-201ENST00000546480 PLEKHH1Q9ULM0 1364 aa19.83■□□□□ 0.76
VENTXP3-201ENST00000546480 POGKQ9P215 609 aa19.82■□□□□ 0.76
VENTXP3-201ENST00000546480 ADGRB1O14514 1584 aa19.82■□□□□ 0.76
VENTXP3-201ENST00000546480 PHLPP1O60346 1717 aa19.82■□□□□ 0.76
VENTXP3-201ENST00000546480 TONSLQ96HA7 1378 aa19.82■□□□□ 0.76
VENTXP3-201ENST00000546480 MST1RQ04912 1400 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms