RNA–Protein interactions for RNA: ENST00000544382.5

CLPB-213, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, human

TSL 5

Gene CLPB, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLPB-213	ENST00000544382	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	18.88	■□□□□ 0.61
CLPB-213	ENST00000544382	BCAN	Q96GW7	911 aa		18.87	■□□□□ 0.61
CLPB-213	ENST00000544382	SLC4A1AP	Q9BWU0	796 aa	Known RBP	18.87	■□□□□ 0.61
CLPB-213	ENST00000544382	RIMS2	Q9UQ26	1411 aa		18.87	■□□□□ 0.61
CLPB-213	ENST00000544382	TRPM2	O94759	1503 aa		18.85	■□□□□ 0.61
CLPB-213	ENST00000544382	ZFYVE9	O95405	1425 aa		18.85	■□□□□ 0.61
CLPB-213	ENST00000544382	KIF1B	O60333	1816 aa		18.83	■□□□□ 0.6
CLPB-213	ENST00000544382	SETD5	Q9C0A6	1442 aa		18.83	■□□□□ 0.6
CLPB-213	ENST00000544382	PLEKHG1	Q9ULL1	1385 aa		18.82	■□□□□ 0.6
CLPB-213	ENST00000544382	UBAP1L	F5GYI3	381 aa		18.82	■□□□□ 0.6
CLPB-213	ENST00000544382	STRCP1	A6NGW2	1772 aa		18.82	■□□□□ 0.6
CLPB-213	ENST00000544382	CLTCL1	P53675	1640 aa		18.81	■□□□□ 0.6
CLPB-213	ENST00000544382	ZNF326	Q5BKZ1	582 aa	Known RBP	18.8	■□□□□ 0.6
CLPB-213	ENST00000544382	SLC26A8	Q96RN1	970 aa		18.8	■□□□□ 0.6
CLPB-213	ENST00000544382	TOM1	O60784	492 aa		18.78	■□□□□ 0.6
CLPB-213	ENST00000544382	LRRC7	Q96NW7	1537 aa		18.78	■□□□□ 0.6
CLPB-213	ENST00000544382	DIP2A	Q14689	1571 aa		18.76	■□□□□ 0.59
CLPB-213	ENST00000544382	KCNA6	P17658	529 aa		18.76	■□□□□ 0.59
CLPB-213	ENST00000544382	MPHOSPH9	Q99550	1183 aa		18.76	■□□□□ 0.59
CLPB-213	ENST00000544382	NUTM2D	Q5VT03	806 aa	Predicted RBP	18.75	■□□□□ 0.59
CLPB-213	ENST00000544382	TBX22	Q9Y458	520 aa		18.74	■□□□□ 0.59
CLPB-213	ENST00000544382	NWD1	Q149M9	1564 aa		18.73	■□□□□ 0.59
CLPB-213	ENST00000544382	NKTR	P30414	1462 aa	Known RBP	18.73	■□□□□ 0.59
CLPB-213	ENST00000544382	RAB3GAP2	Q9H2M9	1393 aa		18.73	■□□□□ 0.59
CLPB-213	ENST00000544382	SENP3	Q9H4L4	574 aa	Predicted RBP	18.73	■□□□□ 0.59
CLPB-213	ENST00000544382	CCDC144A	A2RUR9	1427 aa		18.72	■□□□□ 0.59
CLPB-213	ENST00000544382	CHD2	O14647	1828 aa	Known RBP	18.72	■□□□□ 0.59
CLPB-213	ENST00000544382	SCAF1	Q9H7N4	1312 aa	Known RBP	18.72	■□□□□ 0.59
CLPB-213	ENST00000544382	PIK3R4	Q99570	1358 aa		18.7	■□□□□ 0.58
CLPB-213	ENST00000544382	NEXMIF	Q5QGS0	1516 aa		18.7	■□□□□ 0.58
CLPB-213	ENST00000544382	FOXD1	Q16676	465 aa		18.7	■□□□□ 0.58
CLPB-213	ENST00000544382	PROSER2	Q86WR7	435 aa	Predicted RBP	18.7	■□□□□ 0.58
CLPB-213	ENST00000544382	SETBP1	Q9Y6X0	1596 aa		18.69	■□□□□ 0.58
CLPB-213	ENST00000544382	ADAMTS13	Q76LX8	1427 aa		18.69	■□□□□ 0.58
CLPB-213	ENST00000544382	PIP4K2B	P78356	416 aa		18.69	■□□□□ 0.58
CLPB-213	ENST00000544382	RPGRIP1L	Q68CZ1	1315 aa		18.69	■□□□□ 0.58
CLPB-213	ENST00000544382	XIRP1	Q702N8	1843 aa	Known RBP	18.68	■□□□□ 0.58
CLPB-213	ENST00000544382	TMEM94	Q12767	1356 aa		18.68	■□□□□ 0.58
CLPB-213	ENST00000544382	VGF	O15240	615 aa	Predicted RBP	18.67	■□□□□ 0.58
CLPB-213	ENST00000544382	HRC	P23327	699 aa		18.66	■□□□□ 0.58
CLPB-213	ENST00000544382	NRXN3	Q9Y4C0	1643 aa		18.64	■□□□□ 0.57
CLPB-213	ENST00000544382	PPL	O60437	1756 aa		18.64	■□□□□ 0.57
CLPB-213	ENST00000544382	MSH6	P52701	1360 aa		18.63	■□□□□ 0.57
CLPB-213	ENST00000544382	ALK	Q9UM73	1620 aa		18.61	■□□□□ 0.57
CLPB-213	ENST00000544382	NCOA3	Q9Y6Q9	1424 aa		18.61	■□□□□ 0.57
CLPB-213	ENST00000544382	C14orf37	Q86TY3	774 aa		18.6	■□□□□ 0.57
CLPB-213	ENST00000544382	AMOTL2	Q9Y2J4	779 aa		18.6	■□□□□ 0.57
CLPB-213	ENST00000544382	ANKRD30B	Q9BXX2	1392 aa		18.59	■□□□□ 0.57
CLPB-213	ENST00000544382	SPATA31E1	Q6ZUB1	1445 aa		18.58	■□□□□ 0.57
CLPB-213	ENST00000544382	RGL3	Q3MIN7	710 aa		18.58	■□□□□ 0.56
CLPB-213	ENST00000544382	RBM33	Q96EV2	1170 aa	Known RBP	18.58	■□□□□ 0.56
CLPB-213	ENST00000544382	XRN1	Q8IZH2	1706 aa	Known RBP	18.57	■□□□□ 0.56
CLPB-213	ENST00000544382	MET	P08581	1390 aa		18.56	■□□□□ 0.56
CLPB-213	ENST00000544382	HSPA1L	P34931	641 aa		18.56	■□□□□ 0.56
CLPB-213	ENST00000544382	IFT172	Q9UG01	1749 aa		18.56	■□□□□ 0.56
CLPB-213	ENST00000544382	PTPRU	Q92729	1446 aa		18.56	■□□□□ 0.56
CLPB-213	ENST00000544382	SETD1A	O15047	1707 aa	Known RBP	18.53	■□□□□ 0.56
CLPB-213	ENST00000544382	C19orf44	Q9H6X5	657 aa		18.53	■□□□□ 0.56
CLPB-213	ENST00000544382	FAM135B	Q49AJ0	1406 aa		18.52	■□□□□ 0.56
CLPB-213	ENST00000544382	ATF3	P18847	181 aa		18.52	■□□□□ 0.56
CLPB-213	ENST00000544382	CADPS2	Q86UW7	1296 aa		18.52	■□□□□ 0.56
CLPB-213	ENST00000544382	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	18.51	■□□□□ 0.55
CLPB-213	ENST00000544382	SLAIN2	Q9P270	581 aa		18.5	■□□□□ 0.55
CLPB-213	ENST00000544382	ROBO1	Q9Y6N7	1651 aa		18.5	■□□□□ 0.55
CLPB-213	ENST00000544382	ADGRF5	Q8IZF2	1346 aa		18.49	■□□□□ 0.55
CLPB-213	ENST00000544382	DCC	P43146	1447 aa		18.49	■□□□□ 0.55
CLPB-213	ENST00000544382	PTCH1	Q13635	1447 aa		18.49	■□□□□ 0.55
CLPB-213	ENST00000544382	MYOM2	P54296	1465 aa		18.47	■□□□□ 0.55
CLPB-213	ENST00000544382	PIK3C2G	O75747	1445 aa		18.47	■□□□□ 0.55
CLPB-213	ENST00000544382	PRAG1	Q86YV5	1406 aa		18.46	■□□□□ 0.55
CLPB-213	ENST00000544382	LAMC1	P11047	1609 aa		18.45	■□□□□ 0.54
CLPB-213	ENST00000544382	ADGRL3	Q9HAR2	1447 aa		18.44	■□□□□ 0.54
CLPB-213	ENST00000544382	NRXN1	Q9ULB1	1477 aa		18.42	■□□□□ 0.54
CLPB-213	ENST00000544382	STAC3	Q96MF2	364 aa		18.42	■□□□□ 0.54
CLPB-213	ENST00000544382	NALCN	Q8IZF0	1738 aa		18.42	■□□□□ 0.54
CLPB-213	ENST00000544382	ROBO2	Q9HCK4	1378 aa		18.42	■□□□□ 0.54
CLPB-213	ENST00000544382	PHLPP1	O60346	1717 aa		18.41	■□□□□ 0.54
CLPB-213	ENST00000544382	LRPPRC	P42704	1394 aa	Known RBP	18.41	■□□□□ 0.54
CLPB-213	ENST00000544382	KNDC1	Q76NI1	1749 aa		18.4	■□□□□ 0.54
CLPB-213	ENST00000544382	C14orf93	Q9H972	538 aa	Known RBP	18.39	■□□□□ 0.53
CLPB-213	ENST00000544382	STK26	Q9P289	416 aa		18.39	■□□□□ 0.53
CLPB-213	ENST00000544382	TECPR2	O15040	1411 aa		18.39	■□□□□ 0.53
CLPB-213	ENST00000544382	DCAF11	Q8TEB1	546 aa		18.38	■□□□□ 0.53
CLPB-213	ENST00000544382	DHX57	Q6P158	1386 aa	Known RBP	18.38	■□□□□ 0.53
CLPB-213	ENST00000544382	ABCC11	Q96J66	1382 aa		18.38	■□□□□ 0.53
CLPB-213	ENST00000544382	MED1	Q15648	1581 aa	Predicted RBP	18.38	■□□□□ 0.53
CLPB-213	ENST00000544382	TMEM132E	Q6IEE7	984 aa		18.37	■□□□□ 0.53
CLPB-213	ENST00000544382	MST1R	Q04912	1400 aa		18.37	■□□□□ 0.53
CLPB-213	ENST00000544382	YTHDC2	Q9H6S0	1430 aa	Known RBP	18.37	■□□□□ 0.53
CLPB-213	ENST00000544382	ASXL1	Q8IXJ9	1541 aa		18.37	■□□□□ 0.53
CLPB-213	ENST00000544382	TRIM26	Q12899	539 aa	Predicted RBP	18.36	■□□□□ 0.53
CLPB-213	ENST00000544382	CFAP70	Q5T0N1	1121 aa		18.36	■□□□□ 0.53
CLPB-213	ENST00000544382	KDM2A	Q9Y2K7	1162 aa		18.36	■□□□□ 0.53
CLPB-213	ENST00000544382	AHDC1	Q5TGY3	1603 aa	Predicted RBP	18.34	■□□□□ 0.53
CLPB-213	ENST00000544382	BRINP3	Q76B58	766 aa		18.34	■□□□□ 0.53
CLPB-213	ENST00000544382	CDC42BPG	Q6DT37	1551 aa		18.33	■□□□□ 0.52
CLPB-213	ENST00000544382	SIRT1	Q96EB6	747 aa		18.32	■□□□□ 0.52
CLPB-213	ENST00000544382	PHF23	Q9BUL5	403 aa	Predicted RBP	18.32	■□□□□ 0.52
CLPB-213	ENST00000544382	JCAD	Q9P266	1359 aa		18.31	■□□□□ 0.52
CLPB-213	ENST00000544382	COL16A1	Q07092	1604 aa	Predicted RBP	18.31	■□□□□ 0.52

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