RNA–Protein interactions for RNA: ENST00000543854.5

SPPL3-208, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-208ENST00000543854 HDGFP51858 240 aaKnown RBP28.61■■■□□ 2.17
SPPL3-208ENST00000543854 PLEKHG1Q9ULL1 1385 aa28.61■■■□□ 2.17
SPPL3-208ENST00000543854 SLC4A1APQ9BWU0 796 aaKnown RBP28.6■■■□□ 2.17
SPPL3-208ENST00000543854 LRRC7Q96NW7 1537 aa28.59■■■□□ 2.17
SPPL3-208ENST00000543854 UBAP1LF5GYI3 381 aa28.58■■■□□ 2.17
SPPL3-208ENST00000543854 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.58■■■□□ 2.17
SPPL3-208ENST00000543854 BCANQ96GW7 911 aa28.58■■■□□ 2.17
SPPL3-208ENST00000543854 SLC26A8Q96RN1 970 aa28.55■■■□□ 2.16
SPPL3-208ENST00000543854 KIF1BO60333 1816 aa28.54■■■□□ 2.16
SPPL3-208ENST00000543854 NWD1Q149M9 1564 aa28.53■■■□□ 2.16
SPPL3-208ENST00000543854 SETD5Q9C0A6 1442 aa28.52■■■□□ 2.16
SPPL3-208ENST00000543854 DIP2AQ14689 1571 aa28.51■■■□□ 2.15
SPPL3-208ENST00000543854 ACIN1Q9UKV3 1341 aaKnown RBP28.5■■■□□ 2.15
SPPL3-208ENST00000543854 SENP3Q9H4L4 574 aaPredicted RBP28.5■■■□□ 2.15
SPPL3-208ENST00000543854 NUTM2DQ5VT03 806 aaPredicted RBP28.49■■■□□ 2.15
SPPL3-208ENST00000543854 NKTRP30414 1462 aaKnown RBP28.48■■■□□ 2.15
SPPL3-208ENST00000543854 ZNF326Q5BKZ1 582 aaKnown RBP28.48■■■□□ 2.15
SPPL3-208ENST00000543854 TOM1O60784 492 aa28.47■■■□□ 2.15
SPPL3-208ENST00000543854 KCNA6P17658 529 aa28.47■■■□□ 2.15
SPPL3-208ENST00000543854 XIRP1Q702N8 1843 aaKnown RBP28.46■■■□□ 2.15
SPPL3-208ENST00000543854 NEXMIFQ5QGS0 1516 aa28.45■■■□□ 2.15
SPPL3-208ENST00000543854 ADAMTS13Q76LX8 1427 aa28.44■■■□□ 2.14
SPPL3-208ENST00000543854 MPHOSPH9Q99550 1183 aa28.44■■■□□ 2.14
SPPL3-208ENST00000543854 RAB3GAP2Q9H2M9 1393 aa28.44■■■□□ 2.14
SPPL3-208ENST00000543854 CHD2O14647 1828 aaKnown RBP28.43■■■□□ 2.14
SPPL3-208ENST00000543854 SETBP1Q9Y6X0 1596 aa28.42■■■□□ 2.14
SPPL3-208ENST00000543854 FOXD1Q16676 465 aa28.42■■■□□ 2.14
SPPL3-208ENST00000543854 ALKQ9UM73 1620 aa28.42■■■□□ 2.14
SPPL3-208ENST00000543854 SCAF1Q9H7N4 1312 aaKnown RBP28.42■■■□□ 2.14
SPPL3-208ENST00000543854 TBX22Q9Y458 520 aa28.41■■■□□ 2.14
SPPL3-208ENST00000543854 NRXN3Q9Y4C0 1643 aa28.4■■■□□ 2.14
SPPL3-208ENST00000543854 CCDC144AA2RUR9 1427 aa28.4■■■□□ 2.14
SPPL3-208ENST00000543854 TMEM94Q12767 1356 aa28.39■■■□□ 2.14
SPPL3-208ENST00000543854 PIP4K2BP78356 416 aa28.39■■■□□ 2.14
SPPL3-208ENST00000543854 PIK3R4Q99570 1358 aa28.37■■■□□ 2.13
SPPL3-208ENST00000543854 PROSER2Q86WR7 435 aaPredicted RBP28.35■■■□□ 2.13
SPPL3-208ENST00000543854 PPLO60437 1756 aa28.32■■■□□ 2.12
SPPL3-208ENST00000543854 RPGRIP1LQ68CZ1 1315 aa28.29■■■□□ 2.12
SPPL3-208ENST00000543854 RBM33Q96EV2 1170 aaKnown RBP28.28■■■□□ 2.12
SPPL3-208ENST00000543854 XRN1Q8IZH2 1706 aaKnown RBP28.28■■■□□ 2.12
SPPL3-208ENST00000543854 MSH6P52701 1360 aa28.27■■■□□ 2.12
SPPL3-208ENST00000543854 VGFO15240 615 aaPredicted RBP28.27■■■□□ 2.12
SPPL3-208ENST00000543854 SPATA31E1Q6ZUB1 1445 aa28.26■■■□□ 2.11
SPPL3-208ENST00000543854 PTPRUQ92729 1446 aa28.26■■■□□ 2.11
SPPL3-208ENST00000543854 HSPA1LP34931 641 aa28.23■■■□□ 2.11
SPPL3-208ENST00000543854 NCOA3Q9Y6Q9 1424 aa28.23■■■□□ 2.11
SPPL3-208ENST00000543854 IFT172Q9UG01 1749 aa28.23■■■□□ 2.11
SPPL3-208ENST00000543854 METP08581 1390 aa28.23■■■□□ 2.11
SPPL3-208ENST00000543854 SETD1AO15047 1707 aaKnown RBP28.22■■■□□ 2.11
SPPL3-208ENST00000543854 AMOTL2Q9Y2J4 779 aa28.22■■■□□ 2.11
SPPL3-208ENST00000543854 HRCP23327 699 aa28.21■■■□□ 2.11
SPPL3-208ENST00000543854 C14orf37Q86TY3 774 aa28.19■■■□□ 2.1
SPPL3-208ENST00000543854 ANKRD30BQ9BXX2 1392 aa28.17■■■□□ 2.1
SPPL3-208ENST00000543854 RGL3Q3MIN7 710 aa28.17■■■□□ 2.1
SPPL3-208ENST00000543854 ROBO1Q9Y6N7 1651 aa28.15■■■□□ 2.1
SPPL3-208ENST00000543854 FAM135BQ49AJ0 1406 aa28.15■■■□□ 2.1
SPPL3-208ENST00000543854 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.14■■■□□ 2.1
SPPL3-208ENST00000543854 PTCH1Q13635 1447 aa28.1■■■□□ 2.09
SPPL3-208ENST00000543854 ADGRF5Q8IZF2 1346 aa28.1■■■□□ 2.09
SPPL3-208ENST00000543854 C19orf44Q9H6X5 657 aa28.09■■■□□ 2.09
SPPL3-208ENST00000543854 DCCP43146 1447 aa28.09■■■□□ 2.09
SPPL3-208ENST00000543854 PRAG1Q86YV5 1406 aa28.09■■■□□ 2.09
SPPL3-208ENST00000543854 DISP3Q9P2K9 1392 aa28.08■■■□□ 2.09
SPPL3-208ENST00000543854 PIK3C2GO75747 1445 aa28.08■■■□□ 2.09
SPPL3-208ENST00000543854 CADPS2Q86UW7 1296 aa28.07■■■□□ 2.08
SPPL3-208ENST00000543854 SLAIN2Q9P270 581 aa28.07■■■□□ 2.08
SPPL3-208ENST00000543854 MYOM2P54296 1465 aa28.07■■■□□ 2.08
SPPL3-208ENST00000543854 ATF3P18847 181 aa28.06■■■□□ 2.08
SPPL3-208ENST00000543854 NALCNQ8IZF0 1738 aa28.06■■■□□ 2.08
SPPL3-208ENST00000543854 ADGRL3Q9HAR2 1447 aa28.05■■■□□ 2.08
SPPL3-208ENST00000543854 LAMC1P11047 1609 aa28.03■■■□□ 2.08
SPPL3-208ENST00000543854 MED1Q15648 1581 aaPredicted RBP28.02■■■□□ 2.08
SPPL3-208ENST00000543854 NRXN1Q9ULB1 1477 aa28.02■■■□□ 2.08
SPPL3-208ENST00000543854 ROBO2Q9HCK4 1378 aa28.01■■■□□ 2.07
SPPL3-208ENST00000543854 ASXL1Q8IXJ9 1541 aa28■■■□□ 2.07
SPPL3-208ENST00000543854 PHLPP1O60346 1717 aa27.98■■■□□ 2.07
SPPL3-208ENST00000543854 KNDC1Q76NI1 1749 aa27.98■■■□□ 2.07
SPPL3-208ENST00000543854 TECPR2O15040 1411 aa27.95■■■□□ 2.07
SPPL3-208ENST00000543854 MST1RQ04912 1400 aa27.94■■■□□ 2.06
SPPL3-208ENST00000543854 LRPPRCP42704 1394 aaKnown RBP27.94■■■□□ 2.06
SPPL3-208ENST00000543854 AHDC1Q5TGY3 1603 aaPredicted RBP27.92■■■□□ 2.06
SPPL3-208ENST00000543854 COL16A1Q07092 1604 aaPredicted RBP27.9■■■□□ 2.06
SPPL3-208ENST00000543854 STK26Q9P289 416 aa27.9■■■□□ 2.06
SPPL3-208ENST00000543854 YTHDC2Q9H6S0 1430 aaKnown RBP27.9■■■□□ 2.06
SPPL3-208ENST00000543854 TMEM132EQ6IEE7 984 aa27.89■■■□□ 2.06
SPPL3-208ENST00000543854 C14orf93Q9H972 538 aaKnown RBP27.89■■■□□ 2.06
SPPL3-208ENST00000543854 ABCC11Q96J66 1382 aa27.88■■■□□ 2.05
SPPL3-208ENST00000543854 CDC42BPGQ6DT37 1551 aa27.88■■■□□ 2.05
SPPL3-208ENST00000543854 BRINP3Q76B58 766 aa27.87■■■□□ 2.05
SPPL3-208ENST00000543854 CFAP70Q5T0N1 1121 aa27.86■■■□□ 2.05
SPPL3-208ENST00000543854 DCAF11Q8TEB1 546 aa27.85■■■□□ 2.05
SPPL3-208ENST00000543854 STAC3Q96MF2 364 aa27.84■■■□□ 2.05
SPPL3-208ENST00000543854 NHSL1Q5SYE7 1610 aa27.84■■■□□ 2.05
SPPL3-208ENST00000543854 DHX57Q6P158 1386 aaKnown RBP27.84■■■□□ 2.05
SPPL3-208ENST00000543854 KDM2AQ9Y2K7 1162 aa27.82■■■□□ 2.04
SPPL3-208ENST00000543854 JCADQ9P266 1359 aa27.82■■■□□ 2.04
SPPL3-208ENST00000543854 C1orf167Q5SNV9 1468 aa27.82■■■□□ 2.04
SPPL3-208ENST00000543854 ADGRB1O14514 1584 aa27.81■■■□□ 2.04
SPPL3-208ENST00000543854 PHF23Q9BUL5 403 aaPredicted RBP27.8■■■□□ 2.04
SPPL3-208ENST00000543854 PLEKHH1Q9ULM0 1364 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms