RNA–Protein interactions for RNA: ENST00000542602.1

PSMD9-208, Transcript of proteasome 26S subunit, non-ATPase 9, human

TSL 3 BASIC

Gene PSMD9, Length 516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD9-208	ENST00000542602	ZFYVE9	O95405	1425 aa		28.25	■■■□□ 2.11
PSMD9-208	ENST00000542602	TMEM131L	A2VDJ0	1609 aa		28.25	■■■□□ 2.11
PSMD9-208	ENST00000542602	SLC26A8	Q96RN1	970 aa		28.24	■■■□□ 2.11
PSMD9-208	ENST00000542602	PLEKHG1	Q9ULL1	1385 aa		28.23	■■■□□ 2.11
PSMD9-208	ENST00000542602	UBAP1L	F5GYI3	381 aa		28.22	■■■□□ 2.11
PSMD9-208	ENST00000542602	KCNA6	P17658	529 aa		28.21	■■■□□ 2.11
PSMD9-208	ENST00000542602	ZNF326	Q5BKZ1	582 aa	Known RBP	28.21	■■■□□ 2.11
PSMD9-208	ENST00000542602	TBX22	Q9Y458	520 aa		28.2	■■■□□ 2.1
PSMD9-208	ENST00000542602	TOM1	O60784	492 aa		28.18	■■■□□ 2.1
PSMD9-208	ENST00000542602	HRC	P23327	699 aa		28.17	■■■□□ 2.1
PSMD9-208	ENST00000542602	NUTM2D	Q5VT03	806 aa	Predicted RBP	28.17	■■■□□ 2.1
PSMD9-208	ENST00000542602	TRPM2	O94759	1503 aa		28.16	■■■□□ 2.1
PSMD9-208	ENST00000542602	SPHKAP	Q2M3C7	1700 aa		28.15	■■■□□ 2.1
PSMD9-208	ENST00000542602	FOXD1	Q16676	465 aa		28.13	■■■□□ 2.09
PSMD9-208	ENST00000542602	RAB3GAP2	Q9H2M9	1393 aa		28.12	■■■□□ 2.09
PSMD9-208	ENST00000542602	LRRC7	Q96NW7	1537 aa		28.11	■■■□□ 2.09
PSMD9-208	ENST00000542602	SENP3	Q9H4L4	574 aa	Predicted RBP	28.1	■■■□□ 2.09
PSMD9-208	ENST00000542602	RPGRIP1L	Q68CZ1	1315 aa		28.1	■■■□□ 2.09
PSMD9-208	ENST00000542602	PROSER2	Q86WR7	435 aa	Predicted RBP	28.09	■■■□□ 2.09
PSMD9-208	ENST00000542602	VGF	O15240	615 aa	Predicted RBP	28.08	■■■□□ 2.09
PSMD9-208	ENST00000542602	MYO5B	Q9ULV0	1848 aa		28.07	■■■□□ 2.08
PSMD9-208	ENST00000542602	PIK3R4	Q99570	1358 aa		28.05	■■■□□ 2.08
PSMD9-208	ENST00000542602	CLTCL1	P53675	1640 aa		28.04	■■■□□ 2.08
PSMD9-208	ENST00000542602	CCDC144A	A2RUR9	1427 aa		28.04	■■■□□ 2.08
PSMD9-208	ENST00000542602	ADAMTS13	Q76LX8	1427 aa		28.03	■■■□□ 2.08
PSMD9-208	ENST00000542602	PIP4K2B	P78356	416 aa		28.01	■■■□□ 2.07
PSMD9-208	ENST00000542602	STRCP1	A6NGW2	1772 aa		28.01	■■■□□ 2.07
PSMD9-208	ENST00000542602	TMEM94	Q12767	1356 aa		28	■■■□□ 2.07
PSMD9-208	ENST00000542602	SCAF1	Q9H7N4	1312 aa	Known RBP	27.98	■■■□□ 2.07
PSMD9-208	ENST00000542602	NKTR	P30414	1462 aa	Known RBP	27.97	■■■□□ 2.07
PSMD9-208	ENST00000542602	DIP2A	Q14689	1571 aa		27.96	■■■□□ 2.07
PSMD9-208	ENST00000542602	AMOTL2	Q9Y2J4	779 aa		27.96	■■■□□ 2.07
PSMD9-208	ENST00000542602	KIF1B	O60333	1816 aa		27.95	■■■□□ 2.07
PSMD9-208	ENST00000542602	RGL3	Q3MIN7	710 aa		27.95	■■■□□ 2.06
PSMD9-208	ENST00000542602	NEXMIF	Q5QGS0	1516 aa		27.93	■■■□□ 2.06
PSMD9-208	ENST00000542602	NCOA3	Q9Y6Q9	1424 aa		27.92	■■■□□ 2.06
PSMD9-208	ENST00000542602	RBM33	Q96EV2	1170 aa	Known RBP	27.92	■■■□□ 2.06
PSMD9-208	ENST00000542602	NWD1	Q149M9	1564 aa		27.91	■■■□□ 2.06
PSMD9-208	ENST00000542602	SETBP1	Q9Y6X0	1596 aa		27.9	■■■□□ 2.06
PSMD9-208	ENST00000542602	SPATA31E1	Q6ZUB1	1445 aa		27.89	■■■□□ 2.06
PSMD9-208	ENST00000542602	MSH6	P52701	1360 aa		27.88	■■■□□ 2.05
PSMD9-208	ENST00000542602	ANKRD30B	Q9BXX2	1392 aa		27.88	■■■□□ 2.05
PSMD9-208	ENST00000542602	C14orf37	Q86TY3	774 aa		27.87	■■■□□ 2.05
PSMD9-208	ENST00000542602	CHD2	O14647	1828 aa	Known RBP	27.87	■■■□□ 2.05
PSMD9-208	ENST00000542602	MET	P08581	1390 aa		27.86	■■■□□ 2.05
PSMD9-208	ENST00000542602	C19orf44	Q9H6X5	657 aa		27.86	■■■□□ 2.05
PSMD9-208	ENST00000542602	HSPA1L	P34931	641 aa		27.85	■■■□□ 2.05
PSMD9-208	ENST00000542602	PTPRU	Q92729	1446 aa		27.84	■■■□□ 2.05
PSMD9-208	ENST00000542602	SLAIN2	Q9P270	581 aa		27.81	■■■□□ 2.04
PSMD9-208	ENST00000542602	ADGRF5	Q8IZF2	1346 aa		27.81	■■■□□ 2.04
PSMD9-208	ENST00000542602	NRXN3	Q9Y4C0	1643 aa		27.81	■■■□□ 2.04
PSMD9-208	ENST00000542602	CADPS2	Q86UW7	1296 aa		27.8	■■■□□ 2.04
PSMD9-208	ENST00000542602	FAM135B	Q49AJ0	1406 aa		27.8	■■■□□ 2.04
PSMD9-208	ENST00000542602	ALK	Q9UM73	1620 aa		27.8	■■■□□ 2.04
PSMD9-208	ENST00000542602	ATF3	P18847	181 aa		27.79	■■■□□ 2.04
PSMD9-208	ENST00000542602	XIRP1	Q702N8	1843 aa	Known RBP	27.76	■■■□□ 2.04
PSMD9-208	ENST00000542602	STAC3	Q96MF2	364 aa		27.76	■■■□□ 2.03
PSMD9-208	ENST00000542602	PPL	O60437	1756 aa		27.72	■■■□□ 2.03
PSMD9-208	ENST00000542602	C14orf93	Q9H972	538 aa	Known RBP	27.7	■■■□□ 2.02
PSMD9-208	ENST00000542602	TRIM26	Q12899	539 aa	Predicted RBP	27.68	■■■□□ 2.02
PSMD9-208	ENST00000542602	XRN1	Q8IZH2	1706 aa	Known RBP	27.67	■■■□□ 2.02
PSMD9-208	ENST00000542602	PIK3C2G	O75747	1445 aa		27.66	■■■□□ 2.02
PSMD9-208	ENST00000542602	DCAF11	Q8TEB1	546 aa		27.65	■■■□□ 2.02
PSMD9-208	ENST00000542602	DCC	P43146	1447 aa		27.65	■■■□□ 2.02
PSMD9-208	ENST00000542602	PTCH1	Q13635	1447 aa		27.65	■■■□□ 2.02
PSMD9-208	ENST00000542602	PRAG1	Q86YV5	1406 aa		27.65	■■■□□ 2.02
PSMD9-208	ENST00000542602	ROBO2	Q9HCK4	1378 aa		27.63	■■■□□ 2.01
PSMD9-208	ENST00000542602	TMEM132E	Q6IEE7	984 aa		27.63	■■■□□ 2.01
PSMD9-208	ENST00000542602	STK26	Q9P289	416 aa		27.63	■■■□□ 2.01
PSMD9-208	ENST00000542602	KDM2A	Q9Y2K7	1162 aa		27.63	■■■□□ 2.01
PSMD9-208	ENST00000542602	MYOM2	P54296	1465 aa		27.63	■■■□□ 2.01
PSMD9-208	ENST00000542602	ABCC11	Q96J66	1382 aa		27.62	■■■□□ 2.01
PSMD9-208	ENST00000542602	CFAP70	Q5T0N1	1121 aa		27.62	■■■□□ 2.01
PSMD9-208	ENST00000542602	LRPPRC	P42704	1394 aa	Known RBP	27.61	■■■□□ 2.01
PSMD9-208	ENST00000542602	SIRT1	Q96EB6	747 aa		27.61	■■■□□ 2.01
PSMD9-208	ENST00000542602	NRXN1	Q9ULB1	1477 aa		27.61	■■■□□ 2.01
PSMD9-208	ENST00000542602	DISP3	Q9P2K9	1392 aa		27.6	■■■□□ 2.01
PSMD9-208	ENST00000542602	ADGRL3	Q9HAR2	1447 aa		27.59	■■■□□ 2.01
PSMD9-208	ENST00000542602	DHX57	Q6P158	1386 aa	Known RBP	27.59	■■■□□ 2.01
PSMD9-208	ENST00000542602	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	27.58	■■■□□ 2.01
PSMD9-208	ENST00000542602	IFT172	Q9UG01	1749 aa		27.58	■■■□□ 2.01
PSMD9-208	ENST00000542602	SETD1A	O15047	1707 aa	Known RBP	27.57	■■■□□ 2
PSMD9-208	ENST00000542602	TECPR2	O15040	1411 aa		27.55	■■■□□ 2
PSMD9-208	ENST00000542602	BRINP3	Q76B58	766 aa		27.54	■■■□□ 2
PSMD9-208	ENST00000542602	YTHDC2	Q9H6S0	1430 aa	Known RBP	27.54	■■■□□ 2
PSMD9-208	ENST00000542602	ROBO1	Q9Y6N7	1651 aa		27.53	■■■□□ 2
PSMD9-208	ENST00000542602	WAPL	Q7Z5K2	1190 aa		27.53	■■■□□ 2
PSMD9-208	ENST00000542602	MST1R	Q04912	1400 aa		27.5	■■□□□ 1.99
PSMD9-208	ENST00000542602	POGK	Q9P215	609 aa		27.44	■■□□□ 1.98
PSMD9-208	ENST00000542602	ASXL1	Q8IXJ9	1541 aa		27.44	■■□□□ 1.98
PSMD9-208	ENST00000542602	LAMC1	P11047	1609 aa		27.44	■■□□□ 1.98
PSMD9-208	ENST00000542602	JCAD	Q9P266	1359 aa		27.44	■■□□□ 1.98
PSMD9-208	ENST00000542602	C1orf167	Q5SNV9	1468 aa		27.43	■■□□□ 1.98
PSMD9-208	ENST00000542602	PRAM1	Q96QH2	718 aa		27.42	■■□□□ 1.98
PSMD9-208	ENST00000542602	SIN3A	Q96ST3	1273 aa		27.42	■■□□□ 1.98
PSMD9-208	ENST00000542602	PLEKHH1	Q9ULM0	1364 aa		27.41	■■□□□ 1.98
PSMD9-208	ENST00000542602	LRRC59	Q96AG4	307 aa	Known RBP	27.4	■■□□□ 1.98
PSMD9-208	ENST00000542602	ORAI2	Q96SN7	254 aa		27.4	■■□□□ 1.98
PSMD9-208	ENST00000542602	PHF23	Q9BUL5	403 aa	Predicted RBP	27.4	■■□□□ 1.98
PSMD9-208	ENST00000542602	TRAK1	Q9UPV9	953 aa		27.4	■■□□□ 1.98

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms