RNA–Protein interactions for RNA: ENST00000540091.1

SPPL3-205, Transcript of signal peptide peptidase like 3, humanhuman

TSL 4

Gene SPPL3, Length 531 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-205ENST00000540091 MRPL50Q8N5N7 158 aaKnown RBP9□□□□□ -0.97
SPPL3-205ENST00000540091 TTC13Q8NBP0 860 aa8.99□□□□□ -0.97
SPPL3-205ENST00000540091 TSKSQ9UJT2 592 aa8.99□□□□□ -0.97
SPPL3-205ENST00000540091 GOLGA8CPA6NN73 597 aa8.98□□□□□ -0.97
SPPL3-205ENST00000540091 BHMG1C9JSJ3 638 aaPredicted RBP8.98□□□□□ -0.97
SPPL3-205ENST00000540091 GPR37O15354 613 aa8.98□□□□□ -0.97
SPPL3-205ENST00000540091 RBM46Q8TBY0 533 aaKnown RBP8.97□□□□□ -0.97
SPPL3-205ENST00000540091 SOGA1O94964 1423 aa8.97□□□□□ -0.97
SPPL3-205ENST00000540091 FGD5Q6ZNL6 1462 aa8.96□□□□□ -0.97
SPPL3-205ENST00000540091 CUX1P39880 1505 aa8.96□□□□□ -0.97
SPPL3-205ENST00000540091 OATP04181 439 aa8.96□□□□□ -0.98
SPPL3-205ENST00000540091 FAM98CQ17RN3 349 aaKnown RBP8.96□□□□□ -0.98
SPPL3-205ENST00000540091 SPNS2Q8IVW8 549 aa8.96□□□□□ -0.98
SPPL3-205ENST00000540091 ZC3H15Q8WU90 426 aaKnown RBP8.96□□□□□ -0.98
SPPL3-205ENST00000540091 TATDN2Q93075 761 aa8.96□□□□□ -0.98
SPPL3-205ENST00000540091 PNMA3Q9UL41 463 aa8.96□□□□□ -0.98
SPPL3-205ENST00000540091 AQRO60306 1485 aaKnown RBP eCLIP8.96□□□□□ -0.98
SPPL3-205ENST00000540091 MAP2K5Q13163 448 aa8.95□□□□□ -0.98
SPPL3-205ENST00000540091 MYT1LQ9UL68 1186 aa8.95□□□□□ -0.98
SPPL3-205ENST00000540091 MAGI1Q96QZ7 1491 aaPredicted RBP8.95□□□□□ -0.98
SPPL3-205ENST00000540091 RIMBP3CA6NJZ7 1639 aa8.94□□□□□ -0.98
SPPL3-205ENST00000540091 RIMBP3BA6NNM3 1639 aa8.94□□□□□ -0.98
SPPL3-205ENST00000540091 RIMBP3Q9UFD9 1639 aa8.94□□□□□ -0.98
SPPL3-205ENST00000540091 CHD1O14646 1710 aa8.94□□□□□ -0.98
SPPL3-205ENST00000540091 HDGFP51858 240 aaKnown RBP8.94□□□□□ -0.98
SPPL3-205ENST00000540091 NUDT18Q6ZVK8 323 aa8.94□□□□□ -0.98
SPPL3-205ENST00000540091 MINK1Q8N4C8 1332 aaPredicted RBP8.94□□□□□ -0.98
SPPL3-205ENST00000540091 RAD54L2Q9Y4B4 1467 aa8.94□□□□□ -0.98
SPPL3-205ENST00000540091 ARHGEF11O15085 1522 aa8.94□□□□□ -0.98
SPPL3-205ENST00000540091 ZMYND10O75800 440 aa8.93□□□□□ -0.98
SPPL3-205ENST00000540091 KRI1Q8N9T8 703 aaKnown RBP8.93□□□□□ -0.98
SPPL3-205ENST00000540091 FAM198AQ9UFP1 575 aa8.93□□□□□ -0.98
SPPL3-205ENST00000540091 GRIN2BQ13224 1484 aa8.93□□□□□ -0.98
SPPL3-205ENST00000540091 SLC4A3P48751 1232 aa8.92□□□□□ -0.98
SPPL3-205ENST00000540091 BARGINQ6ZT62 677 aa8.92□□□□□ -0.98
SPPL3-205ENST00000540091 ANKK1Q8NFD2 765 aa8.92□□□□□ -0.98
SPPL3-205ENST00000540091 SEPT9Q9UHD8 586 aaPredicted RBP8.92□□□□□ -0.98
SPPL3-205ENST00000540091 ADGRG1Q9Y653 693 aa8.92□□□□□ -0.98
SPPL3-205ENST00000540091 ABCA10Q8WWZ4 1543 aa8.91□□□□□ -0.98
SPPL3-205ENST00000540091 SNAPC4Q5SXM2 1469 aa8.9□□□□□ -0.98
SPPL3-205ENST00000540091 TDRD9Q8NDG6 1382 aaKnown RBP8.9□□□□□ -0.98
SPPL3-205ENST00000540091 FECHP22830 423 aa8.9□□□□□ -0.98
SPPL3-205ENST00000540091 ZFRQ96KR1 1074 aaKnown RBP8.9□□□□□ -0.98
SPPL3-205ENST00000540091 EYA1Q99502 592 aa8.9□□□□□ -0.98
SPPL3-205ENST00000540091 SYNJ1O43426 1573 aa8.9□□□□□ -0.99
SPPL3-205ENST00000540091 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.89□□□□□ -0.99
SPPL3-205ENST00000540091 SUPT5HO00267 1087 aaKnown RBP8.89□□□□□ -0.99
SPPL3-205ENST00000540091 IRF6O14896 467 aa8.89□□□□□ -0.99
SPPL3-205ENST00000540091 DNAJB2P25686 324 aa8.89□□□□□ -0.99
SPPL3-205ENST00000540091 WNT2BQ93097 391 aa8.89□□□□□ -0.99
SPPL3-205ENST00000540091 RNF166Q96A37 237 aaPredicted RBP8.89□□□□□ -0.99
SPPL3-205ENST00000540091 SYNJ2O15056 1496 aa8.89□□□□□ -0.99
SPPL3-205ENST00000540091 GAPVD1Q14C86 1478 aa8.89□□□□□ -0.99
SPPL3-205ENST00000540091 PBRM1Q86U86 1689 aa8.88□□□□□ -0.99
SPPL3-205ENST00000540091 ABCA5Q8WWZ7 1642 aa8.88□□□□□ -0.99
SPPL3-205ENST00000540091 BIVM-ERCC5R4GMW8 1640 aa8.88□□□□□ -0.99
SPPL3-205ENST00000540091 SMAPO00193 183 aa8.88□□□□□ -0.99
SPPL3-205ENST00000540091 METTL3Q86U44 580 aaKnown RBP8.88□□□□□ -0.99
SPPL3-205ENST00000540091 PXYLP1Q8TE99 480 aa8.88□□□□□ -0.99
SPPL3-205ENST00000540091 NECTIN2Q92692 538 aa8.88□□□□□ -0.99
SPPL3-205ENST00000540091 WRNQ14191 1432 aaPredicted RBP eCLIP8.88□□□□□ -0.99
SPPL3-205ENST00000540091 TOP2BQ02880 1626 aa8.87□□□□□ -0.99
SPPL3-205ENST00000540091 CLASP1Q7Z460 1538 aa8.87□□□□□ -0.99
SPPL3-205ENST00000540091 MMRN1Q13201 1228 aa8.87□□□□□ -0.99
SPPL3-205ENST00000540091 LRCH3Q96II8 777 aa8.87□□□□□ -0.99
SPPL3-205ENST00000540091 CHMP7Q8WUX9 453 aaPredicted RBP8.86□□□□□ -0.99
SPPL3-205ENST00000540091 KCTD12Q96CX2 325 aaKnown RBP8.86□□□□□ -0.99
SPPL3-205ENST00000540091 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.86□□□□□ -0.99
SPPL3-205ENST00000540091 RCCD1A6NED2 376 aa8.85□□□□□ -0.99
SPPL3-205ENST00000540091 CCDC102AQ96A19 550 aa8.85□□□□□ -0.99
SPPL3-205ENST00000540091 SOWAHBA6NEL2 793 aa8.84□□□□□ -0.99
SPPL3-205ENST00000540091 FAM161AQ3B820 660 aa8.84□□□□□ -0.99
SPPL3-205ENST00000540091 SLF2Q8IX21 1173 aa8.84□□□□□ -0.99
SPPL3-205ENST00000540091 AK7Q96M32 723 aa8.84□□□□□ -0.99
SPPL3-205ENST00000540091 ARAP1Q96P48 1450 aa8.83□□□□□ -1
SPPL3-205ENST00000540091 C3orf80F5H4A9 247 aa8.83□□□□□ -1
SPPL3-205ENST00000540091 RSPH4AQ5TD94 716 aa8.83□□□□□ -1
SPPL3-205ENST00000540091 THSD4Q6ZMP0 1018 aa8.83□□□□□ -1
SPPL3-205ENST00000540091 SAMD7Q7Z3H4 446 aa8.83□□□□□ -1
SPPL3-205ENST00000540091 TMEM134Q9H6X4 195 aa8.83□□□□□ -1
SPPL3-205ENST00000540091 HCSTQ9UBK5 93 aa8.82□□□□□ -1
SPPL3-205ENST00000540091 ERICH3Q5RHP9 1530 aa8.81□□□□□ -1
SPPL3-205ENST00000540091 NYAP1Q6ZVC0 841 aa8.81□□□□□ -1
SPPL3-205ENST00000540091 ADAMTS12P58397 1594 aa8.81□□□□□ -1
SPPL3-205ENST00000540091 SWT1Q5T5J6 900 aaKnown RBP8.8□□□□□ -1
SPPL3-205ENST00000540091 CYB5RLQ6IPT4 315 aa8.8□□□□□ -1
SPPL3-205ENST00000540091 SULF1Q8IWU6 871 aa8.8□□□□□ -1
SPPL3-205ENST00000540091 DAXXQ9UER7 740 aaPredicted RBP8.8□□□□□ -1
SPPL3-205ENST00000540091 TSR3Q9UJK0 312 aaKnown RBP8.8□□□□□ -1
SPPL3-205ENST00000540091 GRIN2AQ12879 1464 aa8.8□□□□□ -1
SPPL3-205ENST00000540091 RNF40O75150 1001 aa8.79□□□□□ -1
SPPL3-205ENST00000540091 CLCN1P35523 988 aa8.79□□□□□ -1
SPPL3-205ENST00000540091 PPP4CP60510 307 aa8.79□□□□□ -1
SPPL3-205ENST00000540091 FHAD1B1AJZ9 1412 aa8.79□□□□□ -1
SPPL3-205ENST00000540091 NUP160Q12769 1436 aa8.79□□□□□ -1
SPPL3-205ENST00000540091 BCAMP50895 628 aa8.78□□□□□ -1
SPPL3-205ENST00000540091 TPRNQ4KMQ1 711 aa8.78□□□□□ -1
SPPL3-205ENST00000540091 PRR14Q9BWN1 585 aa8.78□□□□□ -1
SPPL3-205ENST00000540091 SLC24A3Q9HC58 644 aa8.78□□□□□ -1
SPPL3-205ENST00000540091 HPS5Q9UPZ3 1129 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms