RNA–Protein interactions for RNA: ENST00000540009.1

ZNF664-208, Transcript of zinc finger protein 664, human

TSL 3

Gene ZNF664, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF664-208	ENST00000540009	FOXD1	Q16676	465 aa		33.81	■■■■□ 3
ZNF664-208	ENST00000540009	HDGF	P51858	240 aa	Known RBP	33.8	■■■■□ 3
ZNF664-208	ENST00000540009	ACIN1	Q9UKV3	1341 aa	Known RBP	33.79	■■■■□ 3
ZNF664-208	ENST00000540009	PPP1R15A	O75807	674 aa	Predicted RBP	33.78	■■■■□ 3
ZNF664-208	ENST00000540009	CPS1	P31327	1500 aa		33.78	■■■■□ 3
ZNF664-208	ENST00000540009	IQSEC2	Q5JU85	1478 aa		33.77	■■■■□ 3
ZNF664-208	ENST00000540009	NUTM2D	Q5VT03	806 aa	Predicted RBP	33.77	■■■■□ 3
ZNF664-208	ENST00000540009	SENP3	Q9H4L4	574 aa	Predicted RBP	33.77	■■■■□ 3
ZNF664-208	ENST00000540009	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	33.76	■■■□□ 2.99
ZNF664-208	ENST00000540009	BCAN	Q96GW7	911 aa		33.76	■■■□□ 2.99
ZNF664-208	ENST00000540009	SLC26A8	Q96RN1	970 aa		33.75	■■■□□ 2.99
ZNF664-208	ENST00000540009	PLEKHG1	Q9ULL1	1385 aa		33.73	■■■□□ 2.99
ZNF664-208	ENST00000540009	STRCP1	A6NGW2	1772 aa		33.73	■■■□□ 2.99
ZNF664-208	ENST00000540009	ZNF326	Q5BKZ1	582 aa	Known RBP	33.72	■■■□□ 2.99
ZNF664-208	ENST00000540009	KIF1B	O60333	1816 aa		33.69	■■■□□ 2.98
ZNF664-208	ENST00000540009	HRC	P23327	699 aa		33.62	■■■□□ 2.97
ZNF664-208	ENST00000540009	LRRC7	Q96NW7	1537 aa		33.62	■■■□□ 2.97
ZNF664-208	ENST00000540009	CCDC144A	A2RUR9	1427 aa		33.61	■■■□□ 2.97
ZNF664-208	ENST00000540009	NEXMIF	Q5QGS0	1516 aa		33.59	■■■□□ 2.97
ZNF664-208	ENST00000540009	KCNA6	P17658	529 aa		33.59	■■■□□ 2.97
ZNF664-208	ENST00000540009	ADAMTS13	Q76LX8	1427 aa		33.59	■■■□□ 2.97
ZNF664-208	ENST00000540009	TBX22	Q9Y458	520 aa		33.58	■■■□□ 2.97
ZNF664-208	ENST00000540009	UBAP1L	F5GYI3	381 aa		33.57	■■■□□ 2.96
ZNF664-208	ENST00000540009	DIP2A	Q14689	1571 aa		33.52	■■■□□ 2.96
ZNF664-208	ENST00000540009	NWD1	Q149M9	1564 aa		33.51	■■■□□ 2.96
ZNF664-208	ENST00000540009	SETBP1	Q9Y6X0	1596 aa		33.5	■■■□□ 2.95
ZNF664-208	ENST00000540009	RPGRIP1L	Q68CZ1	1315 aa		33.5	■■■□□ 2.95
ZNF664-208	ENST00000540009	NRXN3	Q9Y4C0	1643 aa		33.5	■■■□□ 2.95
ZNF664-208	ENST00000540009	CHD2	O14647	1828 aa	Known RBP	33.49	■■■□□ 2.95
ZNF664-208	ENST00000540009	SPATA31E1	Q6ZUB1	1445 aa		33.47	■■■□□ 2.95
ZNF664-208	ENST00000540009	RGL3	Q3MIN7	710 aa		33.47	■■■□□ 2.95
ZNF664-208	ENST00000540009	NKTR	P30414	1462 aa	Known RBP	33.46	■■■□□ 2.95
ZNF664-208	ENST00000540009	VGF	O15240	615 aa	Predicted RBP	33.46	■■■□□ 2.95
ZNF664-208	ENST00000540009	TOM1	O60784	492 aa		33.46	■■■□□ 2.95
ZNF664-208	ENST00000540009	PROSER2	Q86WR7	435 aa	Predicted RBP	33.46	■■■□□ 2.95
ZNF664-208	ENST00000540009	XIRP1	Q702N8	1843 aa	Known RBP	33.46	■■■□□ 2.95
ZNF664-208	ENST00000540009	RBM33	Q96EV2	1170 aa	Known RBP	33.45	■■■□□ 2.95
ZNF664-208	ENST00000540009	TMEM94	Q12767	1356 aa		33.45	■■■□□ 2.94
ZNF664-208	ENST00000540009	PIK3R4	Q99570	1358 aa		33.45	■■■□□ 2.94
ZNF664-208	ENST00000540009	PPL	O60437	1756 aa		33.44	■■■□□ 2.94
ZNF664-208	ENST00000540009	ANKRD30B	Q9BXX2	1392 aa		33.41	■■■□□ 2.94
ZNF664-208	ENST00000540009	PTPRU	Q92729	1446 aa		33.39	■■■□□ 2.94
ZNF664-208	ENST00000540009	SCAF1	Q9H7N4	1312 aa	Known RBP	33.39	■■■□□ 2.94
ZNF664-208	ENST00000540009	PIP4K2B	P78356	416 aa		33.39	■■■□□ 2.94
ZNF664-208	ENST00000540009	ALK	Q9UM73	1620 aa		33.39	■■■□□ 2.93
ZNF664-208	ENST00000540009	AMOTL2	Q9Y2J4	779 aa		33.38	■■■□□ 2.93
ZNF664-208	ENST00000540009	MET	P08581	1390 aa		33.37	■■■□□ 2.93
ZNF664-208	ENST00000540009	IFT172	Q9UG01	1749 aa		33.33	■■■□□ 2.93
ZNF664-208	ENST00000540009	ADGRF5	Q8IZF2	1346 aa		33.32	■■■□□ 2.93
ZNF664-208	ENST00000540009	XRN1	Q8IZH2	1706 aa	Known RBP	33.29	■■■□□ 2.92
ZNF664-208	ENST00000540009	SETD1A	O15047	1707 aa	Known RBP	33.28	■■■□□ 2.92
ZNF664-208	ENST00000540009	TRIM26	Q12899	539 aa	Predicted RBP	33.28	■■■□□ 2.92
ZNF664-208	ENST00000540009	MSH6	P52701	1360 aa		33.26	■■■□□ 2.92
ZNF664-208	ENST00000540009	NCOA3	Q9Y6Q9	1424 aa		33.24	■■■□□ 2.91
ZNF664-208	ENST00000540009	C14orf37	Q86TY3	774 aa		33.23	■■■□□ 2.91
ZNF664-208	ENST00000540009	PIK3C2G	O75747	1445 aa		33.19	■■■□□ 2.9
ZNF664-208	ENST00000540009	HSPA1L	P34931	641 aa		33.18	■■■□□ 2.9
ZNF664-208	ENST00000540009	MYOM2	P54296	1465 aa		33.18	■■■□□ 2.9
ZNF664-208	ENST00000540009	C19orf44	Q9H6X5	657 aa		33.15	■■■□□ 2.9
ZNF664-208	ENST00000540009	NRXN1	Q9ULB1	1477 aa		33.14	■■■□□ 2.9
ZNF664-208	ENST00000540009	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	33.13	■■■□□ 2.89
ZNF664-208	ENST00000540009	PTCH1	Q13635	1447 aa		33.11	■■■□□ 2.89
ZNF664-208	ENST00000540009	ROBO2	Q9HCK4	1378 aa		33.1	■■■□□ 2.89
ZNF664-208	ENST00000540009	DCAF11	Q8TEB1	546 aa		33.1	■■■□□ 2.89
ZNF664-208	ENST00000540009	SLAIN2	Q9P270	581 aa		33.1	■■■□□ 2.89
ZNF664-208	ENST00000540009	FAM135B	Q49AJ0	1406 aa		33.1	■■■□□ 2.89
ZNF664-208	ENST00000540009	ATF3	P18847	181 aa		33.09	■■■□□ 2.89
ZNF664-208	ENST00000540009	TMEM132E	Q6IEE7	984 aa		33.09	■■■□□ 2.89
ZNF664-208	ENST00000540009	KDM2A	Q9Y2K7	1162 aa		33.09	■■■□□ 2.89
ZNF664-208	ENST00000540009	ASXL1	Q8IXJ9	1541 aa		33.08	■■■□□ 2.89
ZNF664-208	ENST00000540009	CADPS2	Q86UW7	1296 aa		33.08	■■■□□ 2.89
ZNF664-208	ENST00000540009	C14orf93	Q9H972	538 aa	Known RBP	33.08	■■■□□ 2.89
ZNF664-208	ENST00000540009	PRAG1	Q86YV5	1406 aa		33.08	■■■□□ 2.89
ZNF664-208	ENST00000540009	DHX57	Q6P158	1386 aa	Known RBP	33.08	■■■□□ 2.89
ZNF664-208	ENST00000540009	CFAP70	Q5T0N1	1121 aa		33.07	■■■□□ 2.88
ZNF664-208	ENST00000540009	STK26	Q9P289	416 aa		33.06	■■■□□ 2.88
ZNF664-208	ENST00000540009	ROBO1	Q9Y6N7	1651 aa		33.05	■■■□□ 2.88
ZNF664-208	ENST00000540009	ADGRL3	Q9HAR2	1447 aa		33.03	■■■□□ 2.88
ZNF664-208	ENST00000540009	LRPPRC	P42704	1394 aa	Known RBP	33.03	■■■□□ 2.88
ZNF664-208	ENST00000540009	DCC	P43146	1447 aa		33.02	■■■□□ 2.88
ZNF664-208	ENST00000540009	NALCN	Q8IZF0	1738 aa		33.02	■■■□□ 2.88
ZNF664-208	ENST00000540009	LAMC1	P11047	1609 aa		33.02	■■■□□ 2.88
ZNF664-208	ENST00000540009	STAC3	Q96MF2	364 aa		33.01	■■■□□ 2.87
ZNF664-208	ENST00000540009	YTHDC2	Q9H6S0	1430 aa	Known RBP	33	■■■□□ 2.87
ZNF664-208	ENST00000540009	TECPR2	O15040	1411 aa		32.99	■■■□□ 2.87
ZNF664-208	ENST00000540009	ABCC11	Q96J66	1382 aa		32.98	■■■□□ 2.87
ZNF664-208	ENST00000540009	SIN3A	Q96ST3	1273 aa		32.97	■■■□□ 2.87
ZNF664-208	ENST00000540009	KNDC1	Q76NI1	1749 aa		32.96	■■■□□ 2.87
ZNF664-208	ENST00000540009	WAPL	Q7Z5K2	1190 aa		32.94	■■■□□ 2.86
ZNF664-208	ENST00000540009	MST1R	Q04912	1400 aa		32.93	■■■□□ 2.86
ZNF664-208	ENST00000540009	PLEKHH1	Q9ULM0	1364 aa		32.91	■■■□□ 2.86
ZNF664-208	ENST00000540009	NEUROD1	Q13562	356 aa		32.9	■■■□□ 2.86
ZNF664-208	ENST00000540009	ADGRB1	O14514	1584 aa		32.89	■■■□□ 2.86
ZNF664-208	ENST00000540009	BRINP3	Q76B58	766 aa		32.87	■■■□□ 2.85
ZNF664-208	ENST00000540009	SIRT1	Q96EB6	747 aa		32.86	■■■□□ 2.85
ZNF664-208	ENST00000540009	PHLPP1	O60346	1717 aa		32.84	■■■□□ 2.85
ZNF664-208	ENST00000540009	L3MBTL2	Q969R5	705 aa		32.83	■■■□□ 2.85
ZNF664-208	ENST00000540009	C1orf167	Q5SNV9	1468 aa		32.81	■■■□□ 2.84
ZNF664-208	ENST00000540009	TRAK1	Q9UPV9	953 aa		32.81	■■■□□ 2.84
ZNF664-208	ENST00000540009	CDC42BPG	Q6DT37	1551 aa		32.8	■■■□□ 2.84

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