RNA–Protein interactions for RNA: ENST00000539885.1

NCAPD2-209, Transcript of non-SMC condensin I complex subunit D2, humanhuman

TSL 3

Gene NCAPD2, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD2-209ENST00000539885 SETD5Q9C0A6 1442 aa16.81■□□□□ 0.28
NCAPD2-209ENST00000539885 RIMS2Q9UQ26 1411 aa16.8■□□□□ 0.28
NCAPD2-209ENST00000539885 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.8■□□□□ 0.28
NCAPD2-209ENST00000539885 SLC4A1APQ9BWU0 796 aaKnown RBP16.8■□□□□ 0.28
NCAPD2-209ENST00000539885 PLEKHG1Q9ULL1 1385 aa16.78■□□□□ 0.28
NCAPD2-209ENST00000539885 UBAP1LF5GYI3 381 aa16.76■□□□□ 0.27
NCAPD2-209ENST00000539885 CHGAP10645 457 aaKnown RBP16.76■□□□□ 0.27
NCAPD2-209ENST00000539885 CLTCL1P53675 1640 aa16.75■□□□□ 0.27
NCAPD2-209ENST00000539885 PPP1R15AO75807 674 aaPredicted RBP16.75■□□□□ 0.27
NCAPD2-209ENST00000539885 RAB3GAP2Q9H2M9 1393 aa16.74■□□□□ 0.27
NCAPD2-209ENST00000539885 DIP2AQ14689 1571 aa16.72■□□□□ 0.27
NCAPD2-209ENST00000539885 HRCP23327 699 aa16.72■□□□□ 0.27
NCAPD2-209ENST00000539885 MPHOSPH9Q99550 1183 aa16.72■□□□□ 0.27
NCAPD2-209ENST00000539885 MYO5BQ9ULV0 1848 aa16.72■□□□□ 0.27
NCAPD2-209ENST00000539885 PHF23Q9BUL5 403 aaPredicted RBP16.71■□□□□ 0.27
NCAPD2-209ENST00000539885 NKTRP30414 1462 aaKnown RBP16.7■□□□□ 0.26
NCAPD2-209ENST00000539885 LRRC7Q96NW7 1537 aa16.7■□□□□ 0.26
NCAPD2-209ENST00000539885 NWD1Q149M9 1564 aa16.69■□□□□ 0.26
NCAPD2-209ENST00000539885 CCDC144AA2RUR9 1427 aa16.69■□□□□ 0.26
NCAPD2-209ENST00000539885 PIK3R4Q99570 1358 aa16.68■□□□□ 0.26
NCAPD2-209ENST00000539885 KCNA6P17658 529 aa16.68■□□□□ 0.26
NCAPD2-209ENST00000539885 ZNF326Q5BKZ1 582 aaKnown RBP16.68■□□□□ 0.26
NCAPD2-209ENST00000539885 BCANQ96GW7 911 aa16.68■□□□□ 0.26
NCAPD2-209ENST00000539885 SLC26A8Q96RN1 970 aa16.68■□□□□ 0.26
NCAPD2-209ENST00000539885 TBX22Q9Y458 520 aa16.68■□□□□ 0.26
NCAPD2-209ENST00000539885 STRCP1A6NGW2 1772 aa16.67■□□□□ 0.26
NCAPD2-209ENST00000539885 NEXMIFQ5QGS0 1516 aa16.67■□□□□ 0.26
NCAPD2-209ENST00000539885 ADAMTS13Q76LX8 1427 aa16.67■□□□□ 0.26
NCAPD2-209ENST00000539885 SETBP1Q9Y6X0 1596 aa16.67■□□□□ 0.26
NCAPD2-209ENST00000539885 RPGRIP1LQ68CZ1 1315 aa16.67■□□□□ 0.26
NCAPD2-209ENST00000539885 KIF1BO60333 1816 aa16.66■□□□□ 0.26
NCAPD2-209ENST00000539885 TOM1O60784 492 aa16.63■□□□□ 0.25
NCAPD2-209ENST00000539885 HSPA1LP34931 641 aa16.63■□□□□ 0.25
NCAPD2-209ENST00000539885 FOXD1Q16676 465 aa16.63■□□□□ 0.25
NCAPD2-209ENST00000539885 SPATA31E1Q6ZUB1 1445 aa16.62■□□□□ 0.25
NCAPD2-209ENST00000539885 VGFO15240 615 aaPredicted RBP16.62■□□□□ 0.25
NCAPD2-209ENST00000539885 NUTM2DQ5VT03 806 aaPredicted RBP16.62■□□□□ 0.25
NCAPD2-209ENST00000539885 TMEM94Q12767 1356 aa16.61■□□□□ 0.25
NCAPD2-209ENST00000539885 NRXN3Q9Y4C0 1643 aa16.6■□□□□ 0.25
NCAPD2-209ENST00000539885 NCOA3Q9Y6Q9 1424 aa16.6■□□□□ 0.25
NCAPD2-209ENST00000539885 ANKRD30BQ9BXX2 1392 aa16.59■□□□□ 0.25
NCAPD2-209ENST00000539885 PROSER2Q86WR7 435 aaPredicted RBP16.58■□□□□ 0.24
NCAPD2-209ENST00000539885 CHD2O14647 1828 aaKnown RBP16.58■□□□□ 0.24
NCAPD2-209ENST00000539885 ALKQ9UM73 1620 aa16.56■□□□□ 0.24
NCAPD2-209ENST00000539885 PPLO60437 1756 aa16.56■□□□□ 0.24
NCAPD2-209ENST00000539885 SCAF1Q9H7N4 1312 aaKnown RBP16.55■□□□□ 0.24
NCAPD2-209ENST00000539885 SENP3Q9H4L4 574 aaPredicted RBP16.55■□□□□ 0.24
NCAPD2-209ENST00000539885 XRN1Q8IZH2 1706 aaKnown RBP16.55■□□□□ 0.24
NCAPD2-209ENST00000539885 XIRP1Q702N8 1843 aaKnown RBP16.54■□□□□ 0.24
NCAPD2-209ENST00000539885 PRAG1Q86YV5 1406 aa16.53■□□□□ 0.24
NCAPD2-209ENST00000539885 PTPRUQ92729 1446 aa16.53■□□□□ 0.24
NCAPD2-209ENST00000539885 METP08581 1390 aa16.53■□□□□ 0.24
NCAPD2-209ENST00000539885 MSH6P52701 1360 aa16.53■□□□□ 0.24
NCAPD2-209ENST00000539885 AMOTL2Q9Y2J4 779 aa16.53■□□□□ 0.24
NCAPD2-209ENST00000539885 IFT172Q9UG01 1749 aa16.51■□□□□ 0.23
NCAPD2-209ENST00000539885 MYOM2P54296 1465 aa16.51■□□□□ 0.23
NCAPD2-209ENST00000539885 PIP4K2BP78356 416 aa16.51■□□□□ 0.23
NCAPD2-209ENST00000539885 RGL3Q3MIN7 710 aa16.51■□□□□ 0.23
NCAPD2-209ENST00000539885 PIK3C2GO75747 1445 aa16.5■□□□□ 0.23
NCAPD2-209ENST00000539885 PTCH1Q13635 1447 aa16.5■□□□□ 0.23
NCAPD2-209ENST00000539885 SETD1AO15047 1707 aaKnown RBP16.49■□□□□ 0.23
NCAPD2-209ENST00000539885 DCCP43146 1447 aa16.49■□□□□ 0.23
NCAPD2-209ENST00000539885 NRXN1Q9ULB1 1477 aa16.48■□□□□ 0.23
NCAPD2-209ENST00000539885 FAM135BQ49AJ0 1406 aa16.48■□□□□ 0.23
NCAPD2-209ENST00000539885 ADGRF5Q8IZF2 1346 aa16.47■□□□□ 0.23
NCAPD2-209ENST00000539885 STAC3Q96MF2 364 aa16.47■□□□□ 0.23
NCAPD2-209ENST00000539885 C19orf44Q9H6X5 657 aa16.47■□□□□ 0.23
NCAPD2-209ENST00000539885 C14orf37Q86TY3 774 aa16.46■□□□□ 0.23
NCAPD2-209ENST00000539885 CADPS2Q86UW7 1296 aa16.45■□□□□ 0.22
NCAPD2-209ENST00000539885 RBM33Q96EV2 1170 aaKnown RBP16.45■□□□□ 0.22
NCAPD2-209ENST00000539885 LAMC1P11047 1609 aa16.45■□□□□ 0.22
NCAPD2-209ENST00000539885 ADGRL3Q9HAR2 1447 aa16.45■□□□□ 0.22
NCAPD2-209ENST00000539885 TECPR2O15040 1411 aa16.44■□□□□ 0.22
NCAPD2-209ENST00000539885 TRIM26Q12899 539 aaPredicted RBP16.43■□□□□ 0.22
NCAPD2-209ENST00000539885 ATF3P18847 181 aa16.42■□□□□ 0.22
NCAPD2-209ENST00000539885 SLAIN2Q9P270 581 aa16.42■□□□□ 0.22
NCAPD2-209ENST00000539885 LRPPRCP42704 1394 aaKnown RBP16.41■□□□□ 0.22
NCAPD2-209ENST00000539885 ASXL1Q8IXJ9 1541 aa16.4■□□□□ 0.22
NCAPD2-209ENST00000539885 ABCC11Q96J66 1382 aa16.4■□□□□ 0.22
NCAPD2-209ENST00000539885 ROBO2Q9HCK4 1378 aa16.4■□□□□ 0.22
NCAPD2-209ENST00000539885 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.4■□□□□ 0.22
NCAPD2-209ENST00000539885 C14orf93Q9H972 538 aaKnown RBP16.4■□□□□ 0.22
NCAPD2-209ENST00000539885 ROBO1Q9Y6N7 1651 aa16.39■□□□□ 0.21
NCAPD2-209ENST00000539885 RGS17Q9UGC6 210 aaPredicted RBP16.38■□□□□ 0.21
NCAPD2-209ENST00000539885 YTHDC2Q9H6S0 1430 aaKnown RBP16.37■□□□□ 0.21
NCAPD2-209ENST00000539885 KNDC1Q76NI1 1749 aa16.37■□□□□ 0.21
NCAPD2-209ENST00000539885 DHX57Q6P158 1386 aaKnown RBP16.37■□□□□ 0.21
NCAPD2-209ENST00000539885 DCAF11Q8TEB1 546 aa16.36■□□□□ 0.21
NCAPD2-209ENST00000539885 NALCNQ8IZF0 1738 aa16.36■□□□□ 0.21
NCAPD2-209ENST00000539885 MST1RQ04912 1400 aa16.36■□□□□ 0.21
NCAPD2-209ENST00000539885 SIRT1Q96EB6 747 aa16.35■□□□□ 0.21
NCAPD2-209ENST00000539885 CDC42BPGQ6DT37 1551 aa16.34■□□□□ 0.21
NCAPD2-209ENST00000539885 CFAP70Q5T0N1 1121 aa16.33■□□□□ 0.2
NCAPD2-209ENST00000539885 TMEM132EQ6IEE7 984 aa16.33■□□□□ 0.2
NCAPD2-209ENST00000539885 DLC1Q96QB1 1528 aa16.33■□□□□ 0.2
NCAPD2-209ENST00000539885 ADGRB1O14514 1584 aa16.33■□□□□ 0.2
NCAPD2-209ENST00000539885 AHDC1Q5TGY3 1603 aaPredicted RBP16.33■□□□□ 0.2
NCAPD2-209ENST00000539885 STK26Q9P289 416 aa16.31■□□□□ 0.2
NCAPD2-209ENST00000539885 BRINP3Q76B58 766 aa16.3■□□□□ 0.2
NCAPD2-209ENST00000539885 KDM2AQ9Y2K7 1162 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms