RNA–Protein interactions for RNA: ENST00000536872.5

COPS7A-205, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-205ENST00000536872 RIMS2Q9UQ26 1411 aa28.35■■■□□ 2.13
COPS7A-205ENST00000536872 CLTCL1P53675 1640 aa28.34■■■□□ 2.13
COPS7A-205ENST00000536872 ZNF335Q9H4Z2 1342 aaPredicted RBP28.31■■■□□ 2.12
COPS7A-205ENST00000536872 MED14O60244 1454 aa28.3■■■□□ 2.12
COPS7A-205ENST00000536872 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.3■■■□□ 2.12
COPS7A-205ENST00000536872 CCDC144AA2RUR9 1427 aa28.29■■■□□ 2.12
COPS7A-205ENST00000536872 RGL3Q3MIN7 710 aa28.27■■■□□ 2.12
COPS7A-205ENST00000536872 SLC26A8Q96RN1 970 aa28.27■■■□□ 2.12
COPS7A-205ENST00000536872 ZFYVE9O95405 1425 aa28.26■■■□□ 2.12
COPS7A-205ENST00000536872 IQGAP1P46940 1657 aa28.26■■■□□ 2.12
COPS7A-205ENST00000536872 KIF1BO60333 1816 aa28.26■■■□□ 2.11
COPS7A-205ENST00000536872 CERKQ8TCT0 537 aa28.22■■■□□ 2.11
COPS7A-205ENST00000536872 PCGF6Q9BYE7 350 aa28.2■■■□□ 2.1
COPS7A-205ENST00000536872 ANKRD30BQ9BXX2 1392 aa28.2■■■□□ 2.1
COPS7A-205ENST00000536872 PLEKHG1Q9ULL1 1385 aa28.18■■■□□ 2.1
COPS7A-205ENST00000536872 RPGRIP1LQ68CZ1 1315 aa28.15■■■□□ 2.1
COPS7A-205ENST00000536872 LTBP4Q8N2S1 1624 aa28.14■■■□□ 2.09
COPS7A-205ENST00000536872 VGFO15240 615 aaPredicted RBP28.13■■■□□ 2.09
COPS7A-205ENST00000536872 SPATA31E1Q6ZUB1 1445 aa28.1■■■□□ 2.09
COPS7A-205ENST00000536872 NEXMIFQ5QGS0 1516 aa28.1■■■□□ 2.09
COPS7A-205ENST00000536872 TBX22Q9Y458 520 aa28.1■■■□□ 2.09
COPS7A-205ENST00000536872 KCNA6P17658 529 aa28.06■■■□□ 2.08
COPS7A-205ENST00000536872 ADAMTS13Q76LX8 1427 aa28.05■■■□□ 2.08
COPS7A-205ENST00000536872 ADGRF5Q8IZF2 1346 aa28.04■■■□□ 2.08
COPS7A-205ENST00000536872 DHX57Q6P158 1386 aaKnown RBP28.02■■■□□ 2.08
COPS7A-205ENST00000536872 STRCP1A6NGW2 1772 aa28.02■■■□□ 2.08
COPS7A-205ENST00000536872 KDM2AQ9Y2K7 1162 aa28.02■■■□□ 2.08
COPS7A-205ENST00000536872 PROSER2Q86WR7 435 aaPredicted RBP28.01■■■□□ 2.07
COPS7A-205ENST00000536872 CPS1P31327 1500 aa28.01■■■□□ 2.07
COPS7A-205ENST00000536872 PPLO60437 1756 aa28.01■■■□□ 2.07
COPS7A-205ENST00000536872 NEUROD1Q13562 356 aa28■■■□□ 2.07
COPS7A-205ENST00000536872 RBM33Q96EV2 1170 aaKnown RBP28■■■□□ 2.07
COPS7A-205ENST00000536872 SIN3AQ96ST3 1273 aa28■■■□□ 2.07
COPS7A-205ENST00000536872 DCAF11Q8TEB1 546 aa27.98■■■□□ 2.07
COPS7A-205ENST00000536872 FBXO41Q8TF61 875 aa27.97■■■□□ 2.07
COPS7A-205ENST00000536872 AMOTL2Q9Y2J4 779 aa27.97■■■□□ 2.07
COPS7A-205ENST00000536872 SETBP1Q9Y6X0 1596 aa27.95■■■□□ 2.07
COPS7A-205ENST00000536872 METP08581 1390 aa27.95■■■□□ 2.06
COPS7A-205ENST00000536872 NRXN3Q9Y4C0 1643 aa27.95■■■□□ 2.06
COPS7A-205ENST00000536872 LRRC7Q96NW7 1537 aa27.94■■■□□ 2.06
COPS7A-205ENST00000536872 ILDR1Q86SU0 546 aaPredicted RBP27.94■■■□□ 2.06
COPS7A-205ENST00000536872 UBAP1LF5GYI3 381 aa27.93■■■□□ 2.06
COPS7A-205ENST00000536872 DIP2AQ14689 1571 aa27.93■■■□□ 2.06
COPS7A-205ENST00000536872 PIK3R4Q99570 1358 aa27.91■■■□□ 2.06
COPS7A-205ENST00000536872 CHD2O14647 1828 aaKnown RBP27.91■■■□□ 2.06
COPS7A-205ENST00000536872 PTPRUQ92729 1446 aa27.91■■■□□ 2.06
COPS7A-205ENST00000536872 TMEM94Q12767 1356 aa27.9■■■□□ 2.06
COPS7A-205ENST00000536872 IFT172Q9UG01 1749 aa27.89■■■□□ 2.06
COPS7A-205ENST00000536872 ALKQ9UM73 1620 aa27.89■■■□□ 2.05
COPS7A-205ENST00000536872 TMEM132EQ6IEE7 984 aa27.87■■■□□ 2.05
COPS7A-205ENST00000536872 C14orf37Q86TY3 774 aa27.87■■■□□ 2.05
COPS7A-205ENST00000536872 IQSEC2Q5JU85 1478 aa27.87■■■□□ 2.05
COPS7A-205ENST00000536872 CFAP70Q5T0N1 1121 aa27.86■■■□□ 2.05
COPS7A-205ENST00000536872 STK26Q9P289 416 aa27.85■■■□□ 2.05
COPS7A-205ENST00000536872 NWD1Q149M9 1564 aa27.85■■■□□ 2.05
COPS7A-205ENST00000536872 SCAF1Q9H7N4 1312 aaKnown RBP27.84■■■□□ 2.05
COPS7A-205ENST00000536872 NKTRP30414 1462 aaKnown RBP27.83■■■□□ 2.05
COPS7A-205ENST00000536872 TOM1O60784 492 aa27.83■■■□□ 2.05
COPS7A-205ENST00000536872 C14orf93Q9H972 538 aaKnown RBP27.83■■■□□ 2.05
COPS7A-205ENST00000536872 PIK3C2GO75747 1445 aa27.83■■■□□ 2.05
COPS7A-205ENST00000536872 PIP4K2BP78356 416 aa27.82■■■□□ 2.04
COPS7A-205ENST00000536872 MYOM2P54296 1465 aa27.82■■■□□ 2.04
COPS7A-205ENST00000536872 L3MBTL2Q969R5 705 aa27.81■■■□□ 2.04
COPS7A-205ENST00000536872 STAC3Q96MF2 364 aa27.8■■■□□ 2.04
COPS7A-205ENST00000536872 NRXN1Q9ULB1 1477 aa27.78■■■□□ 2.04
COPS7A-205ENST00000536872 XIRP1Q702N8 1843 aaKnown RBP27.78■■■□□ 2.04
COPS7A-205ENST00000536872 SETD1AO15047 1707 aaKnown RBP27.77■■■□□ 2.04
COPS7A-205ENST00000536872 MSH6P52701 1360 aa27.74■■■□□ 2.03
COPS7A-205ENST00000536872 XRN1Q8IZH2 1706 aaKnown RBP27.73■■■□□ 2.03
COPS7A-205ENST00000536872 ROBO2Q9HCK4 1378 aa27.73■■■□□ 2.03
COPS7A-205ENST00000536872 C19orf44Q9H6X5 657 aa27.71■■■□□ 2.03
COPS7A-205ENST00000536872 LRPPRCP42704 1394 aaKnown RBP27.71■■■□□ 2.03
COPS7A-205ENST00000536872 WAPLQ7Z5K2 1190 aa27.7■■■□□ 2.02
COPS7A-205ENST00000536872 CCER1Q8TC90 406 aaPredicted RBP27.7■■■□□ 2.02
COPS7A-205ENST00000536872 ATF3P18847 181 aa27.69■■■□□ 2.02
COPS7A-205ENST00000536872 YTHDC2Q9H6S0 1430 aaKnown RBP27.68■■■□□ 2.02
COPS7A-205ENST00000536872 ASXL1Q8IXJ9 1541 aa27.68■■■□□ 2.02
COPS7A-205ENST00000536872 TONSLQ96HA7 1378 aa27.68■■■□□ 2.02
COPS7A-205ENST00000536872 NCOA3Q9Y6Q9 1424 aa27.67■■■□□ 2.02
COPS7A-205ENST00000536872 ABCC11Q96J66 1382 aa27.66■■■□□ 2.02
COPS7A-205ENST00000536872 TRAK1Q9UPV9 953 aa27.65■■■□□ 2.02
COPS7A-205ENST00000536872 SLAIN2Q9P270 581 aa27.64■■■□□ 2.02
COPS7A-205ENST00000536872 PTCH1Q13635 1447 aa27.64■■■□□ 2.02
COPS7A-205ENST00000536872 PRAG1Q86YV5 1406 aa27.64■■■□□ 2.02
COPS7A-205ENST00000536872 LAMC1P11047 1609 aa27.63■■■□□ 2.01
COPS7A-205ENST00000536872 SAFB2Q14151 953 aaKnown RBP eCLIP27.63■■■□□ 2.01
COPS7A-205ENST00000536872 NBPF1Q3BBV0 1214 aa27.63■■■□□ 2.01
COPS7A-205ENST00000536872 CADPS2Q86UW7 1296 aa27.62■■■□□ 2.01
COPS7A-205ENST00000536872 POGKQ9P215 609 aa27.61■■■□□ 2.01
COPS7A-205ENST00000536872 PLEKHH1Q9ULM0 1364 aa27.6■■■□□ 2.01
COPS7A-205ENST00000536872 PRAM1Q96QH2 718 aa27.6■■■□□ 2.01
COPS7A-205ENST00000536872 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.59■■■□□ 2.01
COPS7A-205ENST00000536872 TECPR2O15040 1411 aa27.58■■■□□ 2
COPS7A-205ENST00000536872 ADGRL3Q9HAR2 1447 aa27.58■■■□□ 2
COPS7A-205ENST00000536872 ADGRB1O14514 1584 aa27.57■■■□□ 2
COPS7A-205ENST00000536872 NBPF8Q3BBV2 869 aa27.56■■■□□ 2
COPS7A-205ENST00000536872 SIRT1Q96EB6 747 aa27.56■■■□□ 2
COPS7A-205ENST00000536872 HSPA1LP34931 641 aa27.55■■■□□ 2
COPS7A-205ENST00000536872 CLSPNQ9HAW4 1339 aa27.53■■■□□ 2
COPS7A-205ENST00000536872 KNDC1Q76NI1 1749 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms