RNA–Protein interactions for RNA: ENST00000534390.2

PAX6-230, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-230ENST00000534390 CPS1P31327 1500 aa23.67■■□□□ 1.38
PAX6-230ENST00000534390 CLTCL1P53675 1640 aa23.66■■□□□ 1.38
PAX6-230ENST00000534390 HDGFP51858 240 aaKnown RBP23.66■■□□□ 1.38
PAX6-230ENST00000534390 ZNF326Q5BKZ1 582 aaKnown RBP23.66■■□□□ 1.38
PAX6-230ENST00000534390 ZFYVE9O95405 1425 aa23.66■■□□□ 1.38
PAX6-230ENST00000534390 FOXD1Q16676 465 aa23.65■■□□□ 1.38
PAX6-230ENST00000534390 IQSEC2Q5JU85 1478 aa23.64■■□□□ 1.38
PAX6-230ENST00000534390 SLC26A8Q96RN1 970 aa23.64■■□□□ 1.37
PAX6-230ENST00000534390 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.63■■□□□ 1.37
PAX6-230ENST00000534390 RAB3GAP2Q9H2M9 1393 aa23.63■■□□□ 1.37
PAX6-230ENST00000534390 STRCP1A6NGW2 1772 aa23.62■■□□□ 1.37
PAX6-230ENST00000534390 MPHOSPH9Q99550 1183 aa23.61■■□□□ 1.37
PAX6-230ENST00000534390 KIF1BO60333 1816 aa23.61■■□□□ 1.37
PAX6-230ENST00000534390 PLEKHG1Q9ULL1 1385 aa23.6■■□□□ 1.37
PAX6-230ENST00000534390 UBAP1LF5GYI3 381 aa23.59■■□□□ 1.37
PAX6-230ENST00000534390 ACIN1Q9UKV3 1341 aaKnown RBP23.56■■□□□ 1.36
PAX6-230ENST00000534390 SCAF1Q9H7N4 1312 aaKnown RBP23.54■■□□□ 1.36
PAX6-230ENST00000534390 LRRC7Q96NW7 1537 aa23.54■■□□□ 1.36
PAX6-230ENST00000534390 CCDC144AA2RUR9 1427 aa23.52■■□□□ 1.36
PAX6-230ENST00000534390 NEXMIFQ5QGS0 1516 aa23.49■■□□□ 1.35
PAX6-230ENST00000534390 KCNA6P17658 529 aa23.49■■□□□ 1.35
PAX6-230ENST00000534390 PIP4K2BP78356 416 aa23.48■■□□□ 1.35
PAX6-230ENST00000534390 DIP2AQ14689 1571 aa23.48■■□□□ 1.35
PAX6-230ENST00000534390 TOM1O60784 492 aa23.47■■□□□ 1.35
PAX6-230ENST00000534390 PROSER2Q86WR7 435 aaPredicted RBP23.47■■□□□ 1.35
PAX6-230ENST00000534390 ADAMTS13Q76LX8 1427 aa23.47■■□□□ 1.35
PAX6-230ENST00000534390 NWD1Q149M9 1564 aa23.46■■□□□ 1.35
PAX6-230ENST00000534390 TBX22Q9Y458 520 aa23.46■■□□□ 1.35
PAX6-230ENST00000534390 RBM33Q96EV2 1170 aaKnown RBP23.45■■□□□ 1.34
PAX6-230ENST00000534390 RGL3Q3MIN7 710 aa23.44■■□□□ 1.34
PAX6-230ENST00000534390 CHD2O14647 1828 aaKnown RBP23.44■■□□□ 1.34
PAX6-230ENST00000534390 NKTRP30414 1462 aaKnown RBP23.43■■□□□ 1.34
PAX6-230ENST00000534390 TMEM94Q12767 1356 aa23.43■■□□□ 1.34
PAX6-230ENST00000534390 SETBP1Q9Y6X0 1596 aa23.43■■□□□ 1.34
PAX6-230ENST00000534390 XIRP1Q702N8 1843 aaKnown RBP23.43■■□□□ 1.34
PAX6-230ENST00000534390 NRXN3Q9Y4C0 1643 aa23.42■■□□□ 1.34
PAX6-230ENST00000534390 PPLO60437 1756 aa23.4■■□□□ 1.34
PAX6-230ENST00000534390 VGFO15240 615 aaPredicted RBP23.4■■□□□ 1.34
PAX6-230ENST00000534390 RPGRIP1LQ68CZ1 1315 aa23.39■■□□□ 1.34
PAX6-230ENST00000534390 C14orf37Q86TY3 774 aa23.38■■□□□ 1.33
PAX6-230ENST00000534390 HRCP23327 699 aa23.37■■□□□ 1.33
PAX6-230ENST00000534390 PIK3R4Q99570 1358 aa23.37■■□□□ 1.33
PAX6-230ENST00000534390 SPATA31E1Q6ZUB1 1445 aa23.35■■□□□ 1.33
PAX6-230ENST00000534390 AMOTL2Q9Y2J4 779 aa23.35■■□□□ 1.33
PAX6-230ENST00000534390 ALKQ9UM73 1620 aa23.34■■□□□ 1.33
PAX6-230ENST00000534390 METP08581 1390 aa23.34■■□□□ 1.33
PAX6-230ENST00000534390 PTPRUQ92729 1446 aa23.33■■□□□ 1.33
PAX6-230ENST00000534390 MSH6P52701 1360 aa23.33■■□□□ 1.33
PAX6-230ENST00000534390 IFT172Q9UG01 1749 aa23.3■■□□□ 1.32
PAX6-230ENST00000534390 XRN1Q8IZH2 1706 aaKnown RBP23.3■■□□□ 1.32
PAX6-230ENST00000534390 ANKRD30BQ9BXX2 1392 aa23.29■■□□□ 1.32
PAX6-230ENST00000534390 ADGRF5Q8IZF2 1346 aa23.29■■□□□ 1.32
PAX6-230ENST00000534390 HSPA1LP34931 641 aa23.28■■□□□ 1.32
PAX6-230ENST00000534390 SETD1AO15047 1707 aaKnown RBP23.26■■□□□ 1.31
PAX6-230ENST00000534390 NCOA3Q9Y6Q9 1424 aa23.22■■□□□ 1.31
PAX6-230ENST00000534390 ATF3P18847 181 aa23.21■■□□□ 1.31
PAX6-230ENST00000534390 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.21■■□□□ 1.31
PAX6-230ENST00000534390 ROBO1Q9Y6N7 1651 aa23.19■■□□□ 1.3
PAX6-230ENST00000534390 PIK3C2GO75747 1445 aa23.19■■□□□ 1.3
PAX6-230ENST00000534390 TRIM26Q12899 539 aaPredicted RBP23.19■■□□□ 1.3
PAX6-230ENST00000534390 C19orf44Q9H6X5 657 aa23.19■■□□□ 1.3
PAX6-230ENST00000534390 MYOM2P54296 1465 aa23.18■■□□□ 1.3
PAX6-230ENST00000534390 SLAIN2Q9P270 581 aa23.18■■□□□ 1.3
PAX6-230ENST00000534390 STK26Q9P289 416 aa23.18■■□□□ 1.3
PAX6-230ENST00000534390 KDM2AQ9Y2K7 1162 aa23.18■■□□□ 1.3
PAX6-230ENST00000534390 CADPS2Q86UW7 1296 aa23.17■■□□□ 1.3
PAX6-230ENST00000534390 ROBO2Q9HCK4 1378 aa23.16■■□□□ 1.3
PAX6-230ENST00000534390 DCAF11Q8TEB1 546 aa23.16■■□□□ 1.3
PAX6-230ENST00000534390 PTCH1Q13635 1447 aa23.16■■□□□ 1.3
PAX6-230ENST00000534390 TMEM132EQ6IEE7 984 aa23.15■■□□□ 1.3
PAX6-230ENST00000534390 FAM135BQ49AJ0 1406 aa23.15■■□□□ 1.3
PAX6-230ENST00000534390 NALCNQ8IZF0 1738 aa23.14■■□□□ 1.3
PAX6-230ENST00000534390 ADGRL3Q9HAR2 1447 aa23.13■■□□□ 1.29
PAX6-230ENST00000534390 ASXL1Q8IXJ9 1541 aa23.13■■□□□ 1.29
PAX6-230ENST00000534390 NRXN1Q9ULB1 1477 aa23.12■■□□□ 1.29
PAX6-230ENST00000534390 LAMC1P11047 1609 aa23.12■■□□□ 1.29
PAX6-230ENST00000534390 CFAP70Q5T0N1 1121 aa23.12■■□□□ 1.29
PAX6-230ENST00000534390 DCCP43146 1447 aa23.1■■□□□ 1.29
PAX6-230ENST00000534390 DISP3Q9P2K9 1392 aa23.1■■□□□ 1.29
PAX6-230ENST00000534390 C14orf93Q9H972 538 aaKnown RBP23.09■■□□□ 1.29
PAX6-230ENST00000534390 LRPPRCP42704 1394 aaKnown RBP23.09■■□□□ 1.29
PAX6-230ENST00000534390 YTHDC2Q9H6S0 1430 aaKnown RBP23.08■■□□□ 1.28
PAX6-230ENST00000534390 PHLPP1O60346 1717 aa23.07■■□□□ 1.28
PAX6-230ENST00000534390 PRAG1Q86YV5 1406 aa23.07■■□□□ 1.28
PAX6-230ENST00000534390 DHX57Q6P158 1386 aaKnown RBP23.06■■□□□ 1.28
PAX6-230ENST00000534390 KNDC1Q76NI1 1749 aa23.06■■□□□ 1.28
PAX6-230ENST00000534390 WAPLQ7Z5K2 1190 aa23.05■■□□□ 1.28
PAX6-230ENST00000534390 TECPR2O15040 1411 aa23.04■■□□□ 1.28
PAX6-230ENST00000534390 MST1RQ04912 1400 aa23.04■■□□□ 1.28
PAX6-230ENST00000534390 ABCC11Q96J66 1382 aa23.03■■□□□ 1.28
PAX6-230ENST00000534390 NEUROD1Q13562 356 aa23.03■■□□□ 1.28
PAX6-230ENST00000534390 PLEKHH1Q9ULM0 1364 aa23.01■■□□□ 1.27
PAX6-230ENST00000534390 BRINP3Q76B58 766 aa23.01■■□□□ 1.27
PAX6-230ENST00000534390 STAC3Q96MF2 364 aa23.01■■□□□ 1.27
PAX6-230ENST00000534390 SIN3AQ96ST3 1273 aa23.01■■□□□ 1.27
PAX6-230ENST00000534390 MED1Q15648 1581 aaPredicted RBP23.01■■□□□ 1.27
PAX6-230ENST00000534390 SAFB2Q14151 953 aaKnown RBP eCLIP22.99■■□□□ 1.27
PAX6-230ENST00000534390 POGKQ9P215 609 aa22.97■■□□□ 1.27
PAX6-230ENST00000534390 TRAK1Q9UPV9 953 aa22.97■■□□□ 1.27
PAX6-230ENST00000534390 ADGRB1O14514 1584 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms