RNA–Protein interactions for RNA: ENST00000533395.5

FOXRED1-215, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 5

Gene FOXRED1, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-215ENST00000533395 HDGFP51858 240 aaKnown RBP27.68■■■□□ 2.02
FOXRED1-215ENST00000533395 ZNF326Q5BKZ1 582 aaKnown RBP27.68■■■□□ 2.02
FOXRED1-215ENST00000533395 SLC26A8Q96RN1 970 aa27.68■■■□□ 2.02
FOXRED1-215ENST00000533395 CLTCL1P53675 1640 aa27.67■■■□□ 2.02
FOXRED1-215ENST00000533395 TRPM2O94759 1503 aa27.67■■■□□ 2.02
FOXRED1-215ENST00000533395 RAB3GAP2Q9H2M9 1393 aa27.66■■■□□ 2.02
FOXRED1-215ENST00000533395 MPHOSPH9Q99550 1183 aa27.66■■■□□ 2.02
FOXRED1-215ENST00000533395 ZFYVE9O95405 1425 aa27.66■■■□□ 2.02
FOXRED1-215ENST00000533395 CPS1P31327 1500 aa27.64■■■□□ 2.02
FOXRED1-215ENST00000533395 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.63■■■□□ 2.01
FOXRED1-215ENST00000533395 STRCP1A6NGW2 1772 aa27.63■■■□□ 2.01
FOXRED1-215ENST00000533395 KIF1BO60333 1816 aa27.61■■■□□ 2.01
FOXRED1-215ENST00000533395 IQSEC2Q5JU85 1478 aa27.6■■■□□ 2.01
FOXRED1-215ENST00000533395 PLEKHG1Q9ULL1 1385 aa27.59■■■□□ 2.01
FOXRED1-215ENST00000533395 UBAP1LF5GYI3 381 aa27.58■■■□□ 2.01
FOXRED1-215ENST00000533395 ACIN1Q9UKV3 1341 aaKnown RBP27.56■■■□□ 2
FOXRED1-215ENST00000533395 LRRC7Q96NW7 1537 aa27.51■■■□□ 2
FOXRED1-215ENST00000533395 CCDC144AA2RUR9 1427 aa27.5■■□□□ 1.99
FOXRED1-215ENST00000533395 SCAF1Q9H7N4 1312 aaKnown RBP27.5■■□□□ 1.99
FOXRED1-215ENST00000533395 KCNA6P17658 529 aa27.49■■□□□ 1.99
FOXRED1-215ENST00000533395 RBM33Q96EV2 1170 aaKnown RBP27.47■■□□□ 1.99
FOXRED1-215ENST00000533395 NEXMIFQ5QGS0 1516 aa27.46■■□□□ 1.99
FOXRED1-215ENST00000533395 PIP4K2BP78356 416 aa27.46■■□□□ 1.99
FOXRED1-215ENST00000533395 PROSER2Q86WR7 435 aaPredicted RBP27.46■■□□□ 1.99
FOXRED1-215ENST00000533395 TBX22Q9Y458 520 aa27.46■■□□□ 1.99
FOXRED1-215ENST00000533395 ADAMTS13Q76LX8 1427 aa27.45■■□□□ 1.98
FOXRED1-215ENST00000533395 RGL3Q3MIN7 710 aa27.45■■□□□ 1.98
FOXRED1-215ENST00000533395 TOM1O60784 492 aa27.44■■□□□ 1.98
FOXRED1-215ENST00000533395 DIP2AQ14689 1571 aa27.42■■□□□ 1.98
FOXRED1-215ENST00000533395 CHD2O14647 1828 aaKnown RBP27.41■■□□□ 1.98
FOXRED1-215ENST00000533395 XIRP1Q702N8 1843 aaKnown RBP27.41■■□□□ 1.98
FOXRED1-215ENST00000533395 NWD1Q149M9 1564 aa27.39■■□□□ 1.98
FOXRED1-215ENST00000533395 TMEM94Q12767 1356 aa27.39■■□□□ 1.98
FOXRED1-215ENST00000533395 VGFO15240 615 aaPredicted RBP27.39■■□□□ 1.98
FOXRED1-215ENST00000533395 NRXN3Q9Y4C0 1643 aa27.38■■□□□ 1.97
FOXRED1-215ENST00000533395 HRCP23327 699 aa27.38■■□□□ 1.97
FOXRED1-215ENST00000533395 RPGRIP1LQ68CZ1 1315 aa27.38■■□□□ 1.97
FOXRED1-215ENST00000533395 SETBP1Q9Y6X0 1596 aa27.37■■□□□ 1.97
FOXRED1-215ENST00000533395 PPLO60437 1756 aa27.37■■□□□ 1.97
FOXRED1-215ENST00000533395 NKTRP30414 1462 aaKnown RBP27.36■■□□□ 1.97
FOXRED1-215ENST00000533395 AMOTL2Q9Y2J4 779 aa27.33■■□□□ 1.97
FOXRED1-215ENST00000533395 C14orf37Q86TY3 774 aa27.32■■□□□ 1.96
FOXRED1-215ENST00000533395 PIK3R4Q99570 1358 aa27.32■■□□□ 1.96
FOXRED1-215ENST00000533395 SPATA31E1Q6ZUB1 1445 aa27.32■■□□□ 1.96
FOXRED1-215ENST00000533395 METP08581 1390 aa27.31■■□□□ 1.96
FOXRED1-215ENST00000533395 PTPRUQ92729 1446 aa27.31■■□□□ 1.96
FOXRED1-215ENST00000533395 ALKQ9UM73 1620 aa27.29■■□□□ 1.96
FOXRED1-215ENST00000533395 ANKRD30BQ9BXX2 1392 aa27.28■■□□□ 1.96
FOXRED1-215ENST00000533395 ADGRF5Q8IZF2 1346 aa27.27■■□□□ 1.96
FOXRED1-215ENST00000533395 MSH6P52701 1360 aa27.26■■□□□ 1.95
FOXRED1-215ENST00000533395 IFT172Q9UG01 1749 aa27.26■■□□□ 1.95
FOXRED1-215ENST00000533395 XRN1Q8IZH2 1706 aaKnown RBP27.21■■□□□ 1.95
FOXRED1-215ENST00000533395 HSPA1LP34931 641 aa27.21■■□□□ 1.95
FOXRED1-215ENST00000533395 SETD1AO15047 1707 aaKnown RBP27.2■■□□□ 1.94
FOXRED1-215ENST00000533395 TRIM26Q12899 539 aaPredicted RBP27.19■■□□□ 1.94
FOXRED1-215ENST00000533395 KDM2AQ9Y2K7 1162 aa27.17■■□□□ 1.94
FOXRED1-215ENST00000533395 NCOA3Q9Y6Q9 1424 aa27.15■■□□□ 1.94
FOXRED1-215ENST00000533395 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.14■■□□□ 1.94
FOXRED1-215ENST00000533395 ATF3P18847 181 aa27.14■■□□□ 1.94
FOXRED1-215ENST00000533395 STK26Q9P289 416 aa27.14■■□□□ 1.94
FOXRED1-215ENST00000533395 DCAF11Q8TEB1 546 aa27.13■■□□□ 1.93
FOXRED1-215ENST00000533395 C19orf44Q9H6X5 657 aa27.13■■□□□ 1.93
FOXRED1-215ENST00000533395 SLAIN2Q9P270 581 aa27.13■■□□□ 1.93
FOXRED1-215ENST00000533395 TMEM132EQ6IEE7 984 aa27.12■■□□□ 1.93
FOXRED1-215ENST00000533395 PIK3C2GO75747 1445 aa27.12■■□□□ 1.93
FOXRED1-215ENST00000533395 ROBO1Q9Y6N7 1651 aa27.1■■□□□ 1.93
FOXRED1-215ENST00000533395 MYOM2P54296 1465 aa27.09■■□□□ 1.93
FOXRED1-215ENST00000533395 CADPS2Q86UW7 1296 aa27.09■■□□□ 1.93
FOXRED1-215ENST00000533395 ROBO2Q9HCK4 1378 aa27.08■■□□□ 1.93
FOXRED1-215ENST00000533395 CFAP70Q5T0N1 1121 aa27.07■■□□□ 1.92
FOXRED1-215ENST00000533395 FAM135BQ49AJ0 1406 aa27.07■■□□□ 1.92
FOXRED1-215ENST00000533395 PTCH1Q13635 1447 aa27.05■■□□□ 1.92
FOXRED1-215ENST00000533395 NALCNQ8IZF0 1738 aa27.04■■□□□ 1.92
FOXRED1-215ENST00000533395 ASXL1Q8IXJ9 1541 aa27.03■■□□□ 1.92
FOXRED1-215ENST00000533395 C14orf93Q9H972 538 aaKnown RBP27.03■■□□□ 1.92
FOXRED1-215ENST00000533395 NRXN1Q9ULB1 1477 aa27.03■■□□□ 1.92
FOXRED1-215ENST00000533395 ADGRL3Q9HAR2 1447 aa27.02■■□□□ 1.92
FOXRED1-215ENST00000533395 LAMC1P11047 1609 aa27.01■■□□□ 1.92
FOXRED1-215ENST00000533395 LRPPRCP42704 1394 aaKnown RBP27■■□□□ 1.91
FOXRED1-215ENST00000533395 DHX57Q6P158 1386 aaKnown RBP27■■□□□ 1.91
FOXRED1-215ENST00000533395 WAPLQ7Z5K2 1190 aa27■■□□□ 1.91
FOXRED1-215ENST00000533395 YTHDC2Q9H6S0 1430 aaKnown RBP26.99■■□□□ 1.91
FOXRED1-215ENST00000533395 NEUROD1Q13562 356 aa26.99■■□□□ 1.91
FOXRED1-215ENST00000533395 DCCP43146 1447 aa26.99■■□□□ 1.91
FOXRED1-215ENST00000533395 SIN3AQ96ST3 1273 aa26.98■■□□□ 1.91
FOXRED1-215ENST00000533395 DISP3Q9P2K9 1392 aa26.97■■□□□ 1.91
FOXRED1-215ENST00000533395 PHLPP1O60346 1717 aa26.96■■□□□ 1.91
FOXRED1-215ENST00000533395 PRAG1Q86YV5 1406 aa26.95■■□□□ 1.9
FOXRED1-215ENST00000533395 KNDC1Q76NI1 1749 aa26.95■■□□□ 1.9
FOXRED1-215ENST00000533395 ABCC11Q96J66 1382 aa26.95■■□□□ 1.9
FOXRED1-215ENST00000533395 MST1RQ04912 1400 aa26.93■■□□□ 1.9
FOXRED1-215ENST00000533395 STAC3Q96MF2 364 aa26.93■■□□□ 1.9
FOXRED1-215ENST00000533395 PLEKHH1Q9ULM0 1364 aa26.93■■□□□ 1.9
FOXRED1-215ENST00000533395 TECPR2O15040 1411 aa26.92■■□□□ 1.9
FOXRED1-215ENST00000533395 SAFB2Q14151 953 aaKnown RBP eCLIP26.92■■□□□ 1.9
FOXRED1-215ENST00000533395 BRINP3Q76B58 766 aa26.92■■□□□ 1.9
FOXRED1-215ENST00000533395 TRAK1Q9UPV9 953 aa26.9■■□□□ 1.9
FOXRED1-215ENST00000533395 POGKQ9P215 609 aa26.88■■□□□ 1.89
FOXRED1-215ENST00000533395 NUTM2FA1L443 756 aa26.87■■□□□ 1.89
FOXRED1-215ENST00000533395 PRAM1Q96QH2 718 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms