RNA–Protein interactions for RNA: ENST00000533155.5

NCAPD3-210, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 3

Gene NCAPD3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-210ENST00000533155 SPHKAPQ2M3C7 1700 aa25.91■■□□□ 1.74
NCAPD3-210ENST00000533155 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.91■■□□□ 1.74
NCAPD3-210ENST00000533155 TRIM52Q96A61 297 aa25.91■■□□□ 1.74
NCAPD3-210ENST00000533155 BCANQ96GW7 911 aa25.9■■□□□ 1.74
NCAPD3-210ENST00000533155 PLEKHG1Q9ULL1 1385 aa25.89■■□□□ 1.74
NCAPD3-210ENST00000533155 SLC26A8Q96RN1 970 aa25.88■■□□□ 1.73
NCAPD3-210ENST00000533155 KCNA6P17658 529 aa25.85■■□□□ 1.73
NCAPD3-210ENST00000533155 SCAF1Q9H7N4 1312 aaKnown RBP25.84■■□□□ 1.73
NCAPD3-210ENST00000533155 TRPM2O94759 1503 aa25.83■■□□□ 1.72
NCAPD3-210ENST00000533155 PIP4K2BP78356 416 aa25.82■■□□□ 1.72
NCAPD3-210ENST00000533155 SLC4A1APQ9BWU0 796 aaKnown RBP25.8■■□□□ 1.72
NCAPD3-210ENST00000533155 NKTRP30414 1462 aaKnown RBP25.79■■□□□ 1.72
NCAPD3-210ENST00000533155 NWD1Q149M9 1564 aa25.78■■□□□ 1.72
NCAPD3-210ENST00000533155 NUTM2DQ5VT03 806 aaPredicted RBP25.78■■□□□ 1.72
NCAPD3-210ENST00000533155 SENP3Q9H4L4 574 aaPredicted RBP25.78■■□□□ 1.72
NCAPD3-210ENST00000533155 TBX22Q9Y458 520 aa25.78■■□□□ 1.72
NCAPD3-210ENST00000533155 DIP2AQ14689 1571 aa25.77■■□□□ 1.72
NCAPD3-210ENST00000533155 CLTCL1P53675 1640 aa25.77■■□□□ 1.72
NCAPD3-210ENST00000533155 ZNF326Q5BKZ1 582 aaKnown RBP25.76■■□□□ 1.71
NCAPD3-210ENST00000533155 ALKQ9UM73 1620 aa25.76■■□□□ 1.71
NCAPD3-210ENST00000533155 KIF1BO60333 1816 aa25.76■■□□□ 1.71
NCAPD3-210ENST00000533155 TMEM94Q12767 1356 aa25.75■■□□□ 1.71
NCAPD3-210ENST00000533155 ACIN1Q9UKV3 1341 aaKnown RBP25.75■■□□□ 1.71
NCAPD3-210ENST00000533155 PROSER2Q86WR7 435 aaPredicted RBP25.75■■□□□ 1.71
NCAPD3-210ENST00000533155 XIRP1Q702N8 1843 aaKnown RBP25.74■■□□□ 1.71
NCAPD3-210ENST00000533155 ADAMTS13Q76LX8 1427 aa25.73■■□□□ 1.71
NCAPD3-210ENST00000533155 CHD2O14647 1828 aaKnown RBP25.72■■□□□ 1.71
NCAPD3-210ENST00000533155 PIK3R4Q99570 1358 aa25.71■■□□□ 1.71
NCAPD3-210ENST00000533155 HSPA1LP34931 641 aa25.69■■□□□ 1.7
NCAPD3-210ENST00000533155 MPHOSPH9Q99550 1183 aa25.68■■□□□ 1.7
NCAPD3-210ENST00000533155 SETD5Q9C0A6 1442 aa25.68■■□□□ 1.7
NCAPD3-210ENST00000533155 SETBP1Q9Y6X0 1596 aa25.66■■□□□ 1.7
NCAPD3-210ENST00000533155 NEXMIFQ5QGS0 1516 aa25.66■■□□□ 1.7
NCAPD3-210ENST00000533155 FOXD1Q16676 465 aa25.64■■□□□ 1.7
NCAPD3-210ENST00000533155 MSH6P52701 1360 aa25.64■■□□□ 1.69
NCAPD3-210ENST00000533155 DISP3Q9P2K9 1392 aa25.64■■□□□ 1.69
NCAPD3-210ENST00000533155 RBM33Q96EV2 1170 aaKnown RBP25.63■■□□□ 1.69
NCAPD3-210ENST00000533155 NRXN3Q9Y4C0 1643 aa25.63■■□□□ 1.69
NCAPD3-210ENST00000533155 NCOA3Q9Y6Q9 1424 aa25.63■■□□□ 1.69
NCAPD3-210ENST00000533155 RPGRIP1LQ68CZ1 1315 aa25.62■■□□□ 1.69
NCAPD3-210ENST00000533155 CCDC144AA2RUR9 1427 aa25.61■■□□□ 1.69
NCAPD3-210ENST00000533155 VGFO15240 615 aaPredicted RBP25.6■■□□□ 1.69
NCAPD3-210ENST00000533155 AMOTL2Q9Y2J4 779 aa25.59■■□□□ 1.69
NCAPD3-210ENST00000533155 FAM135BQ49AJ0 1406 aa25.58■■□□□ 1.69
NCAPD3-210ENST00000533155 RAB3GAP2Q9H2M9 1393 aa25.56■■□□□ 1.68
NCAPD3-210ENST00000533155 C14orf37Q86TY3 774 aa25.56■■□□□ 1.68
NCAPD3-210ENST00000533155 PTPRUQ92729 1446 aa25.55■■□□□ 1.68
NCAPD3-210ENST00000533155 XRN1Q8IZH2 1706 aaKnown RBP25.53■■□□□ 1.68
NCAPD3-210ENST00000533155 METP08581 1390 aa25.53■■□□□ 1.68
NCAPD3-210ENST00000533155 PPLO60437 1756 aa25.52■■□□□ 1.68
NCAPD3-210ENST00000533155 C19orf44Q9H6X5 657 aa25.51■■□□□ 1.67
NCAPD3-210ENST00000533155 SLAIN2Q9P270 581 aa25.51■■□□□ 1.67
NCAPD3-210ENST00000533155 ROBO1Q9Y6N7 1651 aa25.5■■□□□ 1.67
NCAPD3-210ENST00000533155 HRCP23327 699 aa25.48■■□□□ 1.67
NCAPD3-210ENST00000533155 CADPS2Q86UW7 1296 aa25.48■■□□□ 1.67
NCAPD3-210ENST00000533155 SPATA31E1Q6ZUB1 1445 aa25.47■■□□□ 1.67
NCAPD3-210ENST00000533155 ATF3P18847 181 aa25.47■■□□□ 1.67
NCAPD3-210ENST00000533155 RGL3Q3MIN7 710 aa25.47■■□□□ 1.67
NCAPD3-210ENST00000533155 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.46■■□□□ 1.67
NCAPD3-210ENST00000533155 ANKRD30BQ9BXX2 1392 aa25.45■■□□□ 1.67
NCAPD3-210ENST00000533155 MED1Q15648 1581 aaPredicted RBP25.45■■□□□ 1.66
NCAPD3-210ENST00000533155 DCCP43146 1447 aa25.44■■□□□ 1.66
NCAPD3-210ENST00000533155 SETD1AO15047 1707 aaKnown RBP25.43■■□□□ 1.66
NCAPD3-210ENST00000533155 PTCH1Q13635 1447 aa25.4■■□□□ 1.66
NCAPD3-210ENST00000533155 IFT172Q9UG01 1749 aa25.4■■□□□ 1.66
NCAPD3-210ENST00000533155 ADGRF5Q8IZF2 1346 aa25.38■■□□□ 1.65
NCAPD3-210ENST00000533155 PRAG1Q86YV5 1406 aa25.37■■□□□ 1.65
NCAPD3-210ENST00000533155 ADGRL3Q9HAR2 1447 aa25.37■■□□□ 1.65
NCAPD3-210ENST00000533155 PHLPP1O60346 1717 aa25.35■■□□□ 1.65
NCAPD3-210ENST00000533155 ILDR2Q71H61 639 aa25.35■■□□□ 1.65
NCAPD3-210ENST00000533155 PHF23Q9BUL5 403 aaPredicted RBP25.33■■□□□ 1.65
NCAPD3-210ENST00000533155 ROBO2Q9HCK4 1378 aa25.32■■□□□ 1.64
NCAPD3-210ENST00000533155 PIK3C2GO75747 1445 aa25.32■■□□□ 1.64
NCAPD3-210ENST00000533155 NALCNQ8IZF0 1738 aa25.32■■□□□ 1.64
NCAPD3-210ENST00000533155 MST1RQ04912 1400 aa25.3■■□□□ 1.64
NCAPD3-210ENST00000533155 MYOM2P54296 1465 aa25.29■■□□□ 1.64
NCAPD3-210ENST00000533155 AHDC1Q5TGY3 1603 aaPredicted RBP25.29■■□□□ 1.64
NCAPD3-210ENST00000533155 BRINP3Q76B58 766 aa25.28■■□□□ 1.64
NCAPD3-210ENST00000533155 JCADQ9P266 1359 aa25.28■■□□□ 1.64
NCAPD3-210ENST00000533155 COL16A1Q07092 1604 aaPredicted RBP25.27■■□□□ 1.64
NCAPD3-210ENST00000533155 NRXN1Q9ULB1 1477 aa25.26■■□□□ 1.63
NCAPD3-210ENST00000533155 LRPPRCP42704 1394 aaKnown RBP25.25■■□□□ 1.63
NCAPD3-210ENST00000533155 TECPR2O15040 1411 aa25.25■■□□□ 1.63
NCAPD3-210ENST00000533155 ASXL1Q8IXJ9 1541 aa25.25■■□□□ 1.63
NCAPD3-210ENST00000533155 LAMC1P11047 1609 aa25.23■■□□□ 1.63
NCAPD3-210ENST00000533155 ABCC11Q96J66 1382 aa25.23■■□□□ 1.63
NCAPD3-210ENST00000533155 STK26Q9P289 416 aa25.23■■□□□ 1.63
NCAPD3-210ENST00000533155 TMEM132EQ6IEE7 984 aa25.22■■□□□ 1.63
NCAPD3-210ENST00000533155 C14orf93Q9H972 538 aaKnown RBP25.22■■□□□ 1.63
NCAPD3-210ENST00000533155 KNDC1Q76NI1 1749 aa25.21■■□□□ 1.63
NCAPD3-210ENST00000533155 C1orf167Q5SNV9 1468 aa25.2■■□□□ 1.62
NCAPD3-210ENST00000533155 YTHDC2Q9H6S0 1430 aaKnown RBP25.2■■□□□ 1.62
NCAPD3-210ENST00000533155 SOCS7O14512 581 aa25.19■■□□□ 1.62
NCAPD3-210ENST00000533155 STAC3Q96MF2 364 aa25.19■■□□□ 1.62
NCAPD3-210ENST00000533155 CFAP70Q5T0N1 1121 aa25.18■■□□□ 1.62
NCAPD3-210ENST00000533155 DHX57Q6P158 1386 aaKnown RBP25.18■■□□□ 1.62
NCAPD3-210ENST00000533155 SPATA31A6Q5VVP1 1343 aa25.17■■□□□ 1.62
NCAPD3-210ENST00000533155 NHSL1Q5SYE7 1610 aa25.17■■□□□ 1.62
NCAPD3-210ENST00000533155 CDC42BPGQ6DT37 1551 aa25.17■■□□□ 1.62
NCAPD3-210ENST00000533155 DCAF11Q8TEB1 546 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms