RNA–Protein interactions for RNA: ENST00000532465.1

LMNB2-205, Transcript of lamin B2, humanhuman

TSL 3

Gene LMNB2, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-205ENST00000532465 TRIM52Q96A61 297 aa28.16■■■□□ 2.1
LMNB2-205ENST00000532465 PPP1R15AO75807 674 aaPredicted RBP28.14■■■□□ 2.1
LMNB2-205ENST00000532465 BCANQ96GW7 911 aa28.14■■■□□ 2.1
LMNB2-205ENST00000532465 PLEKHG1Q9ULL1 1385 aa28.13■■■□□ 2.09
LMNB2-205ENST00000532465 TOM1O60784 492 aa28.12■■■□□ 2.09
LMNB2-205ENST00000532465 HDGFP51858 240 aaKnown RBP28.12■■■□□ 2.09
LMNB2-205ENST00000532465 NUTM2DQ5VT03 806 aaPredicted RBP28.11■■■□□ 2.09
LMNB2-205ENST00000532465 PIP4K2BP78356 416 aa28.1■■■□□ 2.09
LMNB2-205ENST00000532465 SCAF1Q9H7N4 1312 aaKnown RBP28.1■■■□□ 2.09
LMNB2-205ENST00000532465 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.09■■■□□ 2.09
LMNB2-205ENST00000532465 ALKQ9UM73 1620 aa28.09■■■□□ 2.09
LMNB2-205ENST00000532465 KCNA6P17658 529 aa28.08■■■□□ 2.09
LMNB2-205ENST00000532465 TRPM2O94759 1503 aa28.07■■■□□ 2.08
LMNB2-205ENST00000532465 CLTCL1P53675 1640 aa28.07■■■□□ 2.08
LMNB2-205ENST00000532465 XIRP1Q702N8 1843 aaKnown RBP28.06■■■□□ 2.08
LMNB2-205ENST00000532465 SLC4A1APQ9BWU0 796 aaKnown RBP28.05■■■□□ 2.08
LMNB2-205ENST00000532465 NWD1Q149M9 1564 aa28.03■■■□□ 2.08
LMNB2-205ENST00000532465 ADAMTS13Q76LX8 1427 aa28.01■■■□□ 2.08
LMNB2-205ENST00000532465 TMEM94Q12767 1356 aa28■■■□□ 2.07
LMNB2-205ENST00000532465 ZNF326Q5BKZ1 582 aaKnown RBP28■■■□□ 2.07
LMNB2-205ENST00000532465 TBX22Q9Y458 520 aa27.99■■■□□ 2.07
LMNB2-205ENST00000532465 NKTRP30414 1462 aaKnown RBP27.98■■■□□ 2.07
LMNB2-205ENST00000532465 PROSER2Q86WR7 435 aaPredicted RBP27.98■■■□□ 2.07
LMNB2-205ENST00000532465 RBM33Q96EV2 1170 aaKnown RBP27.98■■■□□ 2.07
LMNB2-205ENST00000532465 CHD2O14647 1828 aaKnown RBP27.97■■■□□ 2.07
LMNB2-205ENST00000532465 HSPA1LP34931 641 aa27.96■■■□□ 2.07
LMNB2-205ENST00000532465 FOXD1Q16676 465 aa27.96■■■□□ 2.07
LMNB2-205ENST00000532465 DIP2AQ14689 1571 aa27.95■■■□□ 2.07
LMNB2-205ENST00000532465 KIF1BO60333 1816 aa27.95■■■□□ 2.06
LMNB2-205ENST00000532465 NEXMIFQ5QGS0 1516 aa27.92■■■□□ 2.06
LMNB2-205ENST00000532465 NRXN3Q9Y4C0 1643 aa27.92■■■□□ 2.06
LMNB2-205ENST00000532465 SETD5Q9C0A6 1442 aa27.91■■■□□ 2.06
LMNB2-205ENST00000532465 MPHOSPH9Q99550 1183 aa27.9■■■□□ 2.06
LMNB2-205ENST00000532465 SETBP1Q9Y6X0 1596 aa27.89■■■□□ 2.05
LMNB2-205ENST00000532465 PIK3R4Q99570 1358 aa27.88■■■□□ 2.05
LMNB2-205ENST00000532465 DISP3Q9P2K9 1392 aa27.86■■■□□ 2.05
LMNB2-205ENST00000532465 PTPRUQ92729 1446 aa27.86■■■□□ 2.05
LMNB2-205ENST00000532465 MSH6P52701 1360 aa27.83■■■□□ 2.05
LMNB2-205ENST00000532465 RAB3GAP2Q9H2M9 1393 aa27.83■■■□□ 2.05
LMNB2-205ENST00000532465 AMOTL2Q9Y2J4 779 aa27.82■■■□□ 2.04
LMNB2-205ENST00000532465 METP08581 1390 aa27.8■■■□□ 2.04
LMNB2-205ENST00000532465 CCDC144AA2RUR9 1427 aa27.8■■■□□ 2.04
LMNB2-205ENST00000532465 ACIN1Q9UKV3 1341 aaKnown RBP27.78■■■□□ 2.04
LMNB2-205ENST00000532465 FAM135BQ49AJ0 1406 aa27.77■■■□□ 2.04
LMNB2-205ENST00000532465 NCOA3Q9Y6Q9 1424 aa27.77■■■□□ 2.04
LMNB2-205ENST00000532465 RPGRIP1LQ68CZ1 1315 aa27.77■■■□□ 2.04
LMNB2-205ENST00000532465 XRN1Q8IZH2 1706 aaKnown RBP27.77■■■□□ 2.04
LMNB2-205ENST00000532465 VGFO15240 615 aaPredicted RBP27.76■■■□□ 2.03
LMNB2-205ENST00000532465 C14orf37Q86TY3 774 aa27.76■■■□□ 2.03
LMNB2-205ENST00000532465 PPLO60437 1756 aa27.76■■■□□ 2.03
LMNB2-205ENST00000532465 ROBO1Q9Y6N7 1651 aa27.74■■■□□ 2.03
LMNB2-205ENST00000532465 SPATA31E1Q6ZUB1 1445 aa27.72■■■□□ 2.03
LMNB2-205ENST00000532465 RGL3Q3MIN7 710 aa27.71■■■□□ 2.03
LMNB2-205ENST00000532465 SLAIN2Q9P270 581 aa27.71■■■□□ 2.03
LMNB2-205ENST00000532465 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.7■■■□□ 2.03
LMNB2-205ENST00000532465 SETD1AO15047 1707 aaKnown RBP27.7■■■□□ 2.02
LMNB2-205ENST00000532465 C19orf44Q9H6X5 657 aa27.69■■■□□ 2.02
LMNB2-205ENST00000532465 MED1Q15648 1581 aaPredicted RBP27.69■■■□□ 2.02
LMNB2-205ENST00000532465 ILDR2Q71H61 639 aa27.66■■■□□ 2.02
LMNB2-205ENST00000532465 ADGRF5Q8IZF2 1346 aa27.66■■■□□ 2.02
LMNB2-205ENST00000532465 ATF3P18847 181 aa27.64■■■□□ 2.02
LMNB2-205ENST00000532465 CADPS2Q86UW7 1296 aa27.64■■■□□ 2.02
LMNB2-205ENST00000532465 IFT172Q9UG01 1749 aa27.64■■■□□ 2.01
LMNB2-205ENST00000532465 ANKRD30BQ9BXX2 1392 aa27.61■■■□□ 2.01
LMNB2-205ENST00000532465 DCCP43146 1447 aa27.59■■■□□ 2.01
LMNB2-205ENST00000532465 HRCP23327 699 aa27.59■■■□□ 2.01
LMNB2-205ENST00000532465 PTCH1Q13635 1447 aa27.58■■■□□ 2.01
LMNB2-205ENST00000532465 ADGRL3Q9HAR2 1447 aa27.58■■■□□ 2
LMNB2-205ENST00000532465 ROBO2Q9HCK4 1378 aa27.57■■■□□ 2
LMNB2-205ENST00000532465 PHLPP1O60346 1717 aa27.56■■■□□ 2
LMNB2-205ENST00000532465 NALCNQ8IZF0 1738 aa27.56■■■□□ 2
LMNB2-205ENST00000532465 PRAG1Q86YV5 1406 aa27.55■■■□□ 2
LMNB2-205ENST00000532465 PIK3C2GO75747 1445 aa27.53■■■□□ 2
LMNB2-205ENST00000532465 MST1RQ04912 1400 aa27.52■■■□□ 2
LMNB2-205ENST00000532465 ASXL1Q8IXJ9 1541 aa27.51■■□□□ 1.99
LMNB2-205ENST00000532465 BRINP3Q76B58 766 aa27.5■■□□□ 1.99
LMNB2-205ENST00000532465 COL16A1Q07092 1604 aaPredicted RBP27.49■■□□□ 1.99
LMNB2-205ENST00000532465 PHF23Q9BUL5 403 aaPredicted RBP27.49■■□□□ 1.99
LMNB2-205ENST00000532465 AHDC1Q5TGY3 1603 aaPredicted RBP27.48■■□□□ 1.99
LMNB2-205ENST00000532465 MYOM2P54296 1465 aa27.47■■□□□ 1.99
LMNB2-205ENST00000532465 NRXN1Q9ULB1 1477 aa27.47■■□□□ 1.99
LMNB2-205ENST00000532465 TMEM132EQ6IEE7 984 aa27.47■■□□□ 1.99
LMNB2-205ENST00000532465 STK26Q9P289 416 aa27.46■■□□□ 1.99
LMNB2-205ENST00000532465 LRPPRCP42704 1394 aaKnown RBP27.45■■□□□ 1.98
LMNB2-205ENST00000532465 JCADQ9P266 1359 aa27.44■■□□□ 1.98
LMNB2-205ENST00000532465 TECPR2O15040 1411 aa27.43■■□□□ 1.98
LMNB2-205ENST00000532465 C14orf93Q9H972 538 aaKnown RBP27.42■■□□□ 1.98
LMNB2-205ENST00000532465 CFAP70Q5T0N1 1121 aa27.41■■□□□ 1.98
LMNB2-205ENST00000532465 C1orf167Q5SNV9 1468 aa27.4■■□□□ 1.98
LMNB2-205ENST00000532465 ABCC11Q96J66 1382 aa27.4■■□□□ 1.98
LMNB2-205ENST00000532465 WAPLQ7Z5K2 1190 aa27.4■■□□□ 1.98
LMNB2-205ENST00000532465 KNDC1Q76NI1 1749 aa27.4■■□□□ 1.98
LMNB2-205ENST00000532465 YTHDC2Q9H6S0 1430 aaKnown RBP27.4■■□□□ 1.98
LMNB2-205ENST00000532465 LAMC1P11047 1609 aa27.38■■□□□ 1.97
LMNB2-205ENST00000532465 NHSL1Q5SYE7 1610 aa27.38■■□□□ 1.97
LMNB2-205ENST00000532465 PLEKHH1Q9ULM0 1364 aa27.37■■□□□ 1.97
LMNB2-205ENST00000532465 DDX17Q92841 729 aaKnown RBP27.36■■□□□ 1.97
LMNB2-205ENST00000532465 KDM2AQ9Y2K7 1162 aa27.36■■□□□ 1.97
LMNB2-205ENST00000532465 SOCS7O14512 581 aa27.35■■□□□ 1.97
LMNB2-205ENST00000532465 DCAF11Q8TEB1 546 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms