RNA–Protein interactions for RNA: ENST00000530302.1

CLINT1-209, Transcript of clathrin interactor 1, humanhuman

TSL 2

Gene CLINT1, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-209ENST00000530302 TRPM2O94759 1503 aa11.01□□□□□ -0.65
CLINT1-209ENST00000530302 PPP4R3CPQ6ZMV5 832 aa11.01□□□□□ -0.65
CLINT1-209ENST00000530302 ANKLE2Q86XL3 938 aa11.01□□□□□ -0.65
CLINT1-209ENST00000530302 CNKSR2Q8WXI2 1034 aa11.01□□□□□ -0.65
CLINT1-209ENST00000530302 ZFYVE9O95405 1425 aa11.01□□□□□ -0.65
CLINT1-209ENST00000530302 TRIM52Q96A61 297 aa11□□□□□ -0.65
CLINT1-209ENST00000530302 SLC52A1Q9NWF4 448 aa11□□□□□ -0.65
CLINT1-209ENST00000530302 SETD5Q9C0A6 1442 aa11□□□□□ -0.65
CLINT1-209ENST00000530302 RAB3GAP2Q9H2M9 1393 aa10.99□□□□□ -0.65
CLINT1-209ENST00000530302 ILDR1Q86SU0 546 aaPredicted RBP10.98□□□□□ -0.65
CLINT1-209ENST00000530302 TXNDC2Q86VQ3 553 aa10.98□□□□□ -0.65
CLINT1-209ENST00000530302 CERKQ8TCT0 537 aa10.98□□□□□ -0.65
CLINT1-209ENST00000530302 STAG3Q9UJ98 1225 aa10.98□□□□□ -0.65
CLINT1-209ENST00000530302 SLC4A1APQ9BWU0 796 aaKnown RBP10.97□□□□□ -0.65
CLINT1-209ENST00000530302 RIMS2Q9UQ26 1411 aa10.97□□□□□ -0.65
CLINT1-209ENST00000530302 CHGAP10645 457 aaKnown RBP10.96□□□□□ -0.65
CLINT1-209ENST00000530302 KIF1BO60333 1816 aa10.95□□□□□ -0.66
CLINT1-209ENST00000530302 DSG3P32926 999 aa10.95□□□□□ -0.66
CLINT1-209ENST00000530302 NUTM2DQ5VT03 806 aaPredicted RBP10.95□□□□□ -0.66
CLINT1-209ENST00000530302 NEXMIFQ5QGS0 1516 aa10.94□□□□□ -0.66
CLINT1-209ENST00000530302 MPHOSPH9Q99550 1183 aa10.94□□□□□ -0.66
CLINT1-209ENST00000530302 NRXN3Q9Y4C0 1643 aa10.94□□□□□ -0.66
CLINT1-209ENST00000530302 XIRP1Q702N8 1843 aaKnown RBP10.93□□□□□ -0.66
CLINT1-209ENST00000530302 EID1Q9Y6B2 187 aa10.93□□□□□ -0.66
CLINT1-209ENST00000530302 CPS1P31327 1500 aa10.93□□□□□ -0.66
CLINT1-209ENST00000530302 PLEKHG1Q9ULL1 1385 aa10.92□□□□□ -0.66
CLINT1-209ENST00000530302 FBXO41Q8TF61 875 aa10.92□□□□□ -0.66
CLINT1-209ENST00000530302 SLC26A8Q96RN1 970 aa10.92□□□□□ -0.66
CLINT1-209ENST00000530302 ADAMTS13Q76LX8 1427 aa10.92□□□□□ -0.66
CLINT1-209ENST00000530302 NWD1Q149M9 1564 aa10.91□□□□□ -0.66
CLINT1-209ENST00000530302 LRRC7Q96NW7 1537 aa10.91□□□□□ -0.66
CLINT1-209ENST00000530302 IQSEC2Q5JU85 1478 aa10.91□□□□□ -0.66
CLINT1-209ENST00000530302 ALKQ9UM73 1620 aa10.91□□□□□ -0.66
CLINT1-209ENST00000530302 PPLO60437 1756 aa10.9□□□□□ -0.66
CLINT1-209ENST00000530302 CHD2O14647 1828 aaKnown RBP10.89□□□□□ -0.67
CLINT1-209ENST00000530302 PPP1R15AO75807 674 aaPredicted RBP10.89□□□□□ -0.67
CLINT1-209ENST00000530302 SPATA31E1Q6ZUB1 1445 aa10.89□□□□□ -0.67
CLINT1-209ENST00000530302 SETBP1Q9Y6X0 1596 aa10.89□□□□□ -0.67
CLINT1-209ENST00000530302 IFT172Q9UG01 1749 aa10.89□□□□□ -0.67
CLINT1-209ENST00000530302 CCDC144AA2RUR9 1427 aa10.88□□□□□ -0.67
CLINT1-209ENST00000530302 SETD1AO15047 1707 aaKnown RBP10.88□□□□□ -0.67
CLINT1-209ENST00000530302 DIP2AQ14689 1571 aa10.87□□□□□ -0.67
CLINT1-209ENST00000530302 ZNF326Q5BKZ1 582 aaKnown RBP10.87□□□□□ -0.67
CLINT1-209ENST00000530302 PTPRUQ92729 1446 aa10.86□□□□□ -0.67
CLINT1-209ENST00000530302 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.86□□□□□ -0.67
CLINT1-209ENST00000530302 BCANQ96GW7 911 aa10.86□□□□□ -0.67
CLINT1-209ENST00000530302 XRN1Q8IZH2 1706 aaKnown RBP10.85□□□□□ -0.67
CLINT1-209ENST00000530302 RBM33Q96EV2 1170 aaKnown RBP10.85□□□□□ -0.67
CLINT1-209ENST00000530302 ANKRD30BQ9BXX2 1392 aa10.85□□□□□ -0.67
CLINT1-209ENST00000530302 NKTRP30414 1462 aaKnown RBP10.85□□□□□ -0.67
CLINT1-209ENST00000530302 KCNA6P17658 529 aa10.84□□□□□ -0.67
CLINT1-209ENST00000530302 METP08581 1390 aa10.84□□□□□ -0.67
CLINT1-209ENST00000530302 TMEM94Q12767 1356 aa10.83□□□□□ -0.68
CLINT1-209ENST00000530302 HRCP23327 699 aa10.83□□□□□ -0.68
CLINT1-209ENST00000530302 TBX22Q9Y458 520 aa10.83□□□□□ -0.68
CLINT1-209ENST00000530302 UBAP1LF5GYI3 381 aa10.82□□□□□ -0.68
CLINT1-209ENST00000530302 HDGFP51858 240 aaKnown RBP10.82□□□□□ -0.68
CLINT1-209ENST00000530302 RGL3Q3MIN7 710 aa10.82□□□□□ -0.68
CLINT1-209ENST00000530302 ADGRF5Q8IZF2 1346 aa10.82□□□□□ -0.68
CLINT1-209ENST00000530302 ASXL1Q8IXJ9 1541 aa10.81□□□□□ -0.68
CLINT1-209ENST00000530302 ACIN1Q9UKV3 1341 aaKnown RBP10.81□□□□□ -0.68
CLINT1-209ENST00000530302 RPGRIP1LQ68CZ1 1315 aa10.8□□□□□ -0.68
CLINT1-209ENST00000530302 PIK3R4Q99570 1358 aa10.79□□□□□ -0.68
CLINT1-209ENST00000530302 PIK3C2GO75747 1445 aa10.79□□□□□ -0.68
CLINT1-209ENST00000530302 PROSER2Q86WR7 435 aaPredicted RBP10.79□□□□□ -0.68
CLINT1-209ENST00000530302 NRXN1Q9ULB1 1477 aa10.79□□□□□ -0.68
CLINT1-209ENST00000530302 PIP4K2BP78356 416 aa10.78□□□□□ -0.68
CLINT1-209ENST00000530302 AMOTL2Q9Y2J4 779 aa10.78□□□□□ -0.68
CLINT1-209ENST00000530302 MYOM2P54296 1465 aa10.78□□□□□ -0.68
CLINT1-209ENST00000530302 NALCNQ8IZF0 1738 aa10.78□□□□□ -0.68
CLINT1-209ENST00000530302 VGFO15240 615 aaPredicted RBP10.77□□□□□ -0.69
CLINT1-209ENST00000530302 SPINK5Q9NQ38 1064 aaPredicted RBP10.77□□□□□ -0.69
CLINT1-209ENST00000530302 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.77□□□□□ -0.69
CLINT1-209ENST00000530302 DHX57Q6P158 1386 aaKnown RBP10.76□□□□□ -0.69
CLINT1-209ENST00000530302 ROBO2Q9HCK4 1378 aa10.76□□□□□ -0.69
CLINT1-209ENST00000530302 TOM1O60784 492 aa10.75□□□□□ -0.69
CLINT1-209ENST00000530302 TRIM26Q12899 539 aaPredicted RBP10.75□□□□□ -0.69
CLINT1-209ENST00000530302 PRAG1Q86YV5 1406 aa10.75□□□□□ -0.69
CLINT1-209ENST00000530302 ROBO1Q9Y6N7 1651 aa10.74□□□□□ -0.69
CLINT1-209ENST00000530302 CAPN15O75808 1086 aa10.74□□□□□ -0.69
CLINT1-209ENST00000530302 PTCH1Q13635 1447 aa10.74□□□□□ -0.69
CLINT1-209ENST00000530302 KNDC1Q76NI1 1749 aa10.73□□□□□ -0.69
CLINT1-209ENST00000530302 HSPA1LP34931 641 aa10.73□□□□□ -0.69
CLINT1-209ENST00000530302 MSH6P52701 1360 aa10.73□□□□□ -0.69
CLINT1-209ENST00000530302 LAMC1P11047 1609 aa10.73□□□□□ -0.69
CLINT1-209ENST00000530302 TMEM132EQ6IEE7 984 aa10.72□□□□□ -0.69
CLINT1-209ENST00000530302 SP7Q8TDD2 431 aaPredicted RBP10.72□□□□□ -0.69
CLINT1-209ENST00000530302 TECPR2O15040 1411 aa10.72□□□□□ -0.69
CLINT1-209ENST00000530302 ADGRL3Q9HAR2 1447 aa10.72□□□□□ -0.69
CLINT1-209ENST00000530302 NCOA3Q9Y6Q9 1424 aa10.72□□□□□ -0.69
CLINT1-209ENST00000530302 ADGRB1O14514 1584 aa10.72□□□□□ -0.69
CLINT1-209ENST00000530302 CFAP70Q5T0N1 1121 aa10.71□□□□□ -0.69
CLINT1-209ENST00000530302 LRPPRCP42704 1394 aaKnown RBP10.7□□□□□ -0.7
CLINT1-209ENST00000530302 PLEKHH1Q9ULM0 1364 aa10.7□□□□□ -0.7
CLINT1-209ENST00000530302 C14orf37Q86TY3 774 aa10.7□□□□□ -0.7
CLINT1-209ENST00000530302 DCAF11Q8TEB1 546 aa10.7□□□□□ -0.7
CLINT1-209ENST00000530302 SIN3AQ96ST3 1273 aa10.7□□□□□ -0.7
CLINT1-209ENST00000530302 KDM2AQ9Y2K7 1162 aa10.7□□□□□ -0.7
CLINT1-209ENST00000530302 MST1RQ04912 1400 aa10.69□□□□□ -0.7
CLINT1-209ENST00000530302 FAM135BQ49AJ0 1406 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms