RNA–Protein interactions for RNA: ENST00000528789.1

CHRDL2-206, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-206ENST00000528789 SENP3Q9H4L4 574 aaPredicted RBP25.79■■□□□ 1.72
CHRDL2-206ENST00000528789 ZNF326Q5BKZ1 582 aaKnown RBP25.78■■□□□ 1.72
CHRDL2-206ENST00000528789 ZNF335Q9H4Z2 1342 aaPredicted RBP25.78■■□□□ 1.72
CHRDL2-206ENST00000528789 PPP1R15AO75807 674 aaPredicted RBP25.77■■□□□ 1.72
CHRDL2-206ENST00000528789 KIF1BO60333 1816 aa25.75■■□□□ 1.71
CHRDL2-206ENST00000528789 CCDC144AA2RUR9 1427 aa25.75■■□□□ 1.71
CHRDL2-206ENST00000528789 BCANQ96GW7 911 aa25.74■■□□□ 1.71
CHRDL2-206ENST00000528789 HDGFP51858 240 aaKnown RBP25.73■■□□□ 1.71
CHRDL2-206ENST00000528789 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.72■■□□□ 1.71
CHRDL2-206ENST00000528789 LTBP4Q8N2S1 1624 aa25.71■■□□□ 1.71
CHRDL2-206ENST00000528789 SLC26A8Q96RN1 970 aa25.69■■□□□ 1.7
CHRDL2-206ENST00000528789 PLEKHG1Q9ULL1 1385 aa25.69■■□□□ 1.7
CHRDL2-206ENST00000528789 CERKQ8TCT0 537 aa25.68■■□□□ 1.7
CHRDL2-206ENST00000528789 NEXMIFQ5QGS0 1516 aa25.66■■□□□ 1.7
CHRDL2-206ENST00000528789 ANKRD30BQ9BXX2 1392 aa25.66■■□□□ 1.7
CHRDL2-206ENST00000528789 RGL3Q3MIN7 710 aa25.64■■□□□ 1.7
CHRDL2-206ENST00000528789 SPATA31E1Q6ZUB1 1445 aa25.63■■□□□ 1.69
CHRDL2-206ENST00000528789 STRCP1A6NGW2 1772 aa25.59■■□□□ 1.69
CHRDL2-206ENST00000528789 ADAMTS13Q76LX8 1427 aa25.59■■□□□ 1.69
CHRDL2-206ENST00000528789 RPGRIP1LQ68CZ1 1315 aa25.59■■□□□ 1.69
CHRDL2-206ENST00000528789 CPS1P31327 1500 aa25.57■■□□□ 1.68
CHRDL2-206ENST00000528789 PPLO60437 1756 aa25.56■■□□□ 1.68
CHRDL2-206ENST00000528789 TBX22Q9Y458 520 aa25.55■■□□□ 1.68
CHRDL2-206ENST00000528789 NRXN3Q9Y4C0 1643 aa25.55■■□□□ 1.68
CHRDL2-206ENST00000528789 VGFO15240 615 aaPredicted RBP25.54■■□□□ 1.68
CHRDL2-206ENST00000528789 SETBP1Q9Y6X0 1596 aa25.53■■□□□ 1.68
CHRDL2-206ENST00000528789 PCGF6Q9BYE7 350 aa25.53■■□□□ 1.68
CHRDL2-206ENST00000528789 KCNA6P17658 529 aa25.52■■□□□ 1.68
CHRDL2-206ENST00000528789 DIP2AQ14689 1571 aa25.52■■□□□ 1.68
CHRDL2-206ENST00000528789 DHX57Q6P158 1386 aaKnown RBP25.5■■□□□ 1.67
CHRDL2-206ENST00000528789 ADGRF5Q8IZF2 1346 aa25.5■■□□□ 1.67
CHRDL2-206ENST00000528789 IFT172Q9UG01 1749 aa25.49■■□□□ 1.67
CHRDL2-206ENST00000528789 LRRC7Q96NW7 1537 aa25.49■■□□□ 1.67
CHRDL2-206ENST00000528789 IQSEC2Q5JU85 1478 aa25.48■■□□□ 1.67
CHRDL2-206ENST00000528789 NWD1Q149M9 1564 aa25.48■■□□□ 1.67
CHRDL2-206ENST00000528789 FBXO41Q8TF61 875 aa25.47■■□□□ 1.67
CHRDL2-206ENST00000528789 CHD2O14647 1828 aaKnown RBP25.46■■□□□ 1.67
CHRDL2-206ENST00000528789 METP08581 1390 aa25.45■■□□□ 1.67
CHRDL2-206ENST00000528789 ILDR1Q86SU0 546 aaPredicted RBP25.45■■□□□ 1.66
CHRDL2-206ENST00000528789 RBM33Q96EV2 1170 aaKnown RBP25.45■■□□□ 1.66
CHRDL2-206ENST00000528789 PTPRUQ92729 1446 aa25.45■■□□□ 1.66
CHRDL2-206ENST00000528789 PIK3R4Q99570 1358 aa25.44■■□□□ 1.66
CHRDL2-206ENST00000528789 PROSER2Q86WR7 435 aaPredicted RBP25.43■■□□□ 1.66
CHRDL2-206ENST00000528789 NKTRP30414 1462 aaKnown RBP25.42■■□□□ 1.66
CHRDL2-206ENST00000528789 ALKQ9UM73 1620 aa25.42■■□□□ 1.66
CHRDL2-206ENST00000528789 AMOTL2Q9Y2J4 779 aa25.42■■□□□ 1.66
CHRDL2-206ENST00000528789 SIN3AQ96ST3 1273 aa25.41■■□□□ 1.66
CHRDL2-206ENST00000528789 TMEM94Q12767 1356 aa25.41■■□□□ 1.66
CHRDL2-206ENST00000528789 KDM2AQ9Y2K7 1162 aa25.4■■□□□ 1.66
CHRDL2-206ENST00000528789 SETD1AO15047 1707 aaKnown RBP25.4■■□□□ 1.66
CHRDL2-206ENST00000528789 MYOM2P54296 1465 aa25.4■■□□□ 1.66
CHRDL2-206ENST00000528789 UBAP1LF5GYI3 381 aa25.39■■□□□ 1.66
CHRDL2-206ENST00000528789 DCAF11Q8TEB1 546 aa25.39■■□□□ 1.66
CHRDL2-206ENST00000528789 PIK3C2GO75747 1445 aa25.38■■□□□ 1.65
CHRDL2-206ENST00000528789 XIRP1Q702N8 1843 aaKnown RBP25.37■■□□□ 1.65
CHRDL2-206ENST00000528789 NEUROD1Q13562 356 aa25.37■■□□□ 1.65
CHRDL2-206ENST00000528789 NRXN1Q9ULB1 1477 aa25.35■■□□□ 1.65
CHRDL2-206ENST00000528789 XRN1Q8IZH2 1706 aaKnown RBP25.34■■□□□ 1.65
CHRDL2-206ENST00000528789 CFAP70Q5T0N1 1121 aa25.32■■□□□ 1.64
CHRDL2-206ENST00000528789 TMEM132EQ6IEE7 984 aa25.31■■□□□ 1.64
CHRDL2-206ENST00000528789 TOM1O60784 492 aa25.3■■□□□ 1.64
CHRDL2-206ENST00000528789 C14orf93Q9H972 538 aaKnown RBP25.3■■□□□ 1.64
CHRDL2-206ENST00000528789 ASXL1Q8IXJ9 1541 aa25.3■■□□□ 1.64
CHRDL2-206ENST00000528789 C14orf37Q86TY3 774 aa25.29■■□□□ 1.64
CHRDL2-206ENST00000528789 PIP4K2BP78356 416 aa25.28■■□□□ 1.64
CHRDL2-206ENST00000528789 STK26Q9P289 416 aa25.28■■□□□ 1.64
CHRDL2-206ENST00000528789 SCAF1Q9H7N4 1312 aaKnown RBP25.28■■□□□ 1.64
CHRDL2-206ENST00000528789 MSH6P52701 1360 aa25.26■■□□□ 1.63
CHRDL2-206ENST00000528789 ROBO2Q9HCK4 1378 aa25.26■■□□□ 1.63
CHRDL2-206ENST00000528789 L3MBTL2Q969R5 705 aa25.25■■□□□ 1.63
CHRDL2-206ENST00000528789 STAC3Q96MF2 364 aa25.25■■□□□ 1.63
CHRDL2-206ENST00000528789 LAMC1P11047 1609 aa25.24■■□□□ 1.63
CHRDL2-206ENST00000528789 PTCH1Q13635 1447 aa25.23■■□□□ 1.63
CHRDL2-206ENST00000528789 NCOA3Q9Y6Q9 1424 aa25.23■■□□□ 1.63
CHRDL2-206ENST00000528789 LRPPRCP42704 1394 aaKnown RBP25.23■■□□□ 1.63
CHRDL2-206ENST00000528789 YTHDC2Q9H6S0 1430 aaKnown RBP25.21■■□□□ 1.63
CHRDL2-206ENST00000528789 PRAG1Q86YV5 1406 aa25.2■■□□□ 1.62
CHRDL2-206ENST00000528789 C19orf44Q9H6X5 657 aa25.18■■□□□ 1.62
CHRDL2-206ENST00000528789 ABCC11Q96J66 1382 aa25.18■■□□□ 1.62
CHRDL2-206ENST00000528789 TECPR2O15040 1411 aa25.17■■□□□ 1.62
CHRDL2-206ENST00000528789 ADGRB1O14514 1584 aa25.17■■□□□ 1.62
CHRDL2-206ENST00000528789 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.17■■□□□ 1.62
CHRDL2-206ENST00000528789 WAPLQ7Z5K2 1190 aa25.16■■□□□ 1.62
CHRDL2-206ENST00000528789 KNDC1Q76NI1 1749 aa25.15■■□□□ 1.62
CHRDL2-206ENST00000528789 ADGRL3Q9HAR2 1447 aa25.15■■□□□ 1.62
CHRDL2-206ENST00000528789 ATF3P18847 181 aa25.15■■□□□ 1.62
CHRDL2-206ENST00000528789 NALCNQ8IZF0 1738 aa25.15■■□□□ 1.62
CHRDL2-206ENST00000528789 TONSLQ96HA7 1378 aa25.14■■□□□ 1.61
CHRDL2-206ENST00000528789 PLEKHH1Q9ULM0 1364 aa25.14■■□□□ 1.61
CHRDL2-206ENST00000528789 CADPS2Q86UW7 1296 aa25.12■■□□□ 1.61
CHRDL2-206ENST00000528789 SLAIN2Q9P270 581 aa25.11■■□□□ 1.61
CHRDL2-206ENST00000528789 TRAK1Q9UPV9 953 aa25.11■■□□□ 1.61
CHRDL2-206ENST00000528789 NBPF1Q3BBV0 1214 aa25.1■■□□□ 1.61
CHRDL2-206ENST00000528789 DCCP43146 1447 aa25.09■■□□□ 1.61
CHRDL2-206ENST00000528789 HSPA1LP34931 641 aa25.08■■□□□ 1.61
CHRDL2-206ENST00000528789 SAFB2Q14151 953 aaKnown RBP eCLIP25.08■■□□□ 1.61
CHRDL2-206ENST00000528789 CCER1Q8TC90 406 aaPredicted RBP25.08■■□□□ 1.61
CHRDL2-206ENST00000528789 PRAM1Q96QH2 718 aa25.08■■□□□ 1.61
CHRDL2-206ENST00000528789 KIAA1210Q9ULL0 1709 aa25.08■■□□□ 1.61
CHRDL2-206ENST00000528789 FAM135BQ49AJ0 1406 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms