RNA–Protein interactions for RNA: ENST00000527237.1

TRIM3-205, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 339 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-205ENST00000527237 CHGAP10645 457 aaKnown RBP27.25■■□□□ 1.95
TRIM3-205ENST00000527237 CHD2O14647 1828 aaKnown RBP27.23■■□□□ 1.95
TRIM3-205ENST00000527237 SENP3Q9H4L4 574 aaPredicted RBP27.23■■□□□ 1.95
TRIM3-205ENST00000527237 NRXN3Q9Y4C0 1643 aa27.21■■□□□ 1.95
TRIM3-205ENST00000527237 SETD5Q9C0A6 1442 aa27.21■■□□□ 1.95
TRIM3-205ENST00000527237 NWD1Q149M9 1564 aa27.21■■□□□ 1.95
TRIM3-205ENST00000527237 LRRC7Q96NW7 1537 aa27.21■■□□□ 1.95
TRIM3-205ENST00000527237 SLC4A1APQ9BWU0 796 aaKnown RBP27.19■■□□□ 1.94
TRIM3-205ENST00000527237 NEXMIFQ5QGS0 1516 aa27.19■■□□□ 1.94
TRIM3-205ENST00000527237 ALKQ9UM73 1620 aa27.18■■□□□ 1.94
TRIM3-205ENST00000527237 PPLO60437 1756 aa27.17■■□□□ 1.94
TRIM3-205ENST00000527237 NUTM2DQ5VT03 806 aaPredicted RBP27.17■■□□□ 1.94
TRIM3-205ENST00000527237 PLEKHG1Q9ULL1 1385 aa27.17■■□□□ 1.94
TRIM3-205ENST00000527237 RAB3GAP2Q9H2M9 1393 aa27.15■■□□□ 1.94
TRIM3-205ENST00000527237 FOXD1Q16676 465 aa27.15■■□□□ 1.94
TRIM3-205ENST00000527237 SLC26A8Q96RN1 970 aa27.15■■□□□ 1.94
TRIM3-205ENST00000527237 DIP2AQ14689 1571 aa27.14■■□□□ 1.94
TRIM3-205ENST00000527237 IFT172Q9UG01 1749 aa27.13■■□□□ 1.93
TRIM3-205ENST00000527237 PPP1R15AO75807 674 aaPredicted RBP27.12■■□□□ 1.93
TRIM3-205ENST00000527237 ADAMTS13Q76LX8 1427 aa27.11■■□□□ 1.93
TRIM3-205ENST00000527237 SETD1AO15047 1707 aaKnown RBP27.1■■□□□ 1.93
TRIM3-205ENST00000527237 SETBP1Q9Y6X0 1596 aa27.09■■□□□ 1.93
TRIM3-205ENST00000527237 BCANQ96GW7 911 aa27.08■■□□□ 1.93
TRIM3-205ENST00000527237 UBAP1LF5GYI3 381 aa27.07■■□□□ 1.92
TRIM3-205ENST00000527237 MPHOSPH9Q99550 1183 aa27.07■■□□□ 1.92
TRIM3-205ENST00000527237 NKTRP30414 1462 aaKnown RBP27.06■■□□□ 1.92
TRIM3-205ENST00000527237 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.05■■□□□ 1.92
TRIM3-205ENST00000527237 XRN1Q8IZH2 1706 aaKnown RBP27.04■■□□□ 1.92
TRIM3-205ENST00000527237 ZNF326Q5BKZ1 582 aaKnown RBP27.04■■□□□ 1.92
TRIM3-205ENST00000527237 HDGFP51858 240 aaKnown RBP27.02■■□□□ 1.92
TRIM3-205ENST00000527237 CCDC144AA2RUR9 1427 aa27■■□□□ 1.91
TRIM3-205ENST00000527237 KCNA6P17658 529 aa26.99■■□□□ 1.91
TRIM3-205ENST00000527237 TMEM94Q12767 1356 aa26.97■■□□□ 1.91
TRIM3-205ENST00000527237 PTPRUQ92729 1446 aa26.97■■□□□ 1.91
TRIM3-205ENST00000527237 RBM33Q96EV2 1170 aaKnown RBP26.96■■□□□ 1.91
TRIM3-205ENST00000527237 SPATA31E1Q6ZUB1 1445 aa26.96■■□□□ 1.91
TRIM3-205ENST00000527237 TBX22Q9Y458 520 aa26.95■■□□□ 1.9
TRIM3-205ENST00000527237 PIP4K2BP78356 416 aa26.93■■□□□ 1.9
TRIM3-205ENST00000527237 SCAF1Q9H7N4 1312 aaKnown RBP26.92■■□□□ 1.9
TRIM3-205ENST00000527237 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.91■■□□□ 1.9
TRIM3-205ENST00000527237 PIK3R4Q99570 1358 aa26.9■■□□□ 1.9
TRIM3-205ENST00000527237 TOM1O60784 492 aa26.9■■□□□ 1.9
TRIM3-205ENST00000527237 PROSER2Q86WR7 435 aaPredicted RBP26.9■■□□□ 1.9
TRIM3-205ENST00000527237 ACIN1Q9UKV3 1341 aaKnown RBP26.9■■□□□ 1.9
TRIM3-205ENST00000527237 NALCNQ8IZF0 1738 aa26.88■■□□□ 1.89
TRIM3-205ENST00000527237 METP08581 1390 aa26.88■■□□□ 1.89
TRIM3-205ENST00000527237 ROBO1Q9Y6N7 1651 aa26.88■■□□□ 1.89
TRIM3-205ENST00000527237 RGL3Q3MIN7 710 aa26.83■■□□□ 1.89
TRIM3-205ENST00000527237 RPGRIP1LQ68CZ1 1315 aa26.83■■□□□ 1.89
TRIM3-205ENST00000527237 ASXL1Q8IXJ9 1541 aa26.82■■□□□ 1.88
TRIM3-205ENST00000527237 ANKRD30BQ9BXX2 1392 aa26.82■■□□□ 1.88
TRIM3-205ENST00000527237 AMOTL2Q9Y2J4 779 aa26.8■■□□□ 1.88
TRIM3-205ENST00000527237 VGFO15240 615 aaPredicted RBP26.79■■□□□ 1.88
TRIM3-205ENST00000527237 HRCP23327 699 aa26.79■■□□□ 1.88
TRIM3-205ENST00000527237 HSPA1LP34931 641 aa26.79■■□□□ 1.88
TRIM3-205ENST00000527237 ADGRF5Q8IZF2 1346 aa26.79■■□□□ 1.88
TRIM3-205ENST00000527237 MSH6P52701 1360 aa26.79■■□□□ 1.88
TRIM3-205ENST00000527237 KNDC1Q76NI1 1749 aa26.79■■□□□ 1.88
TRIM3-205ENST00000527237 LAMC1P11047 1609 aa26.76■■□□□ 1.87
TRIM3-205ENST00000527237 PIK3C2GO75747 1445 aa26.75■■□□□ 1.87
TRIM3-205ENST00000527237 MYOM2P54296 1465 aa26.74■■□□□ 1.87
TRIM3-205ENST00000527237 NCOA3Q9Y6Q9 1424 aa26.73■■□□□ 1.87
TRIM3-205ENST00000527237 NRXN1Q9ULB1 1477 aa26.73■■□□□ 1.87
TRIM3-205ENST00000527237 PHLPP1O60346 1717 aa26.73■■□□□ 1.87
TRIM3-205ENST00000527237 PTCH1Q13635 1447 aa26.71■■□□□ 1.87
TRIM3-205ENST00000527237 PRAG1Q86YV5 1406 aa26.7■■□□□ 1.86
TRIM3-205ENST00000527237 C14orf37Q86TY3 774 aa26.69■■□□□ 1.86
TRIM3-205ENST00000527237 FAM135BQ49AJ0 1406 aa26.68■■□□□ 1.86
TRIM3-205ENST00000527237 ROBO2Q9HCK4 1378 aa26.68■■□□□ 1.86
TRIM3-205ENST00000527237 ADGRL3Q9HAR2 1447 aa26.67■■□□□ 1.86
TRIM3-205ENST00000527237 MED1Q15648 1581 aaPredicted RBP26.67■■□□□ 1.86
TRIM3-205ENST00000527237 COL16A1Q07092 1604 aaPredicted RBP26.64■■□□□ 1.85
TRIM3-205ENST00000527237 DCCP43146 1447 aa26.64■■□□□ 1.85
TRIM3-205ENST00000527237 NHSL1Q5SYE7 1610 aa26.61■■□□□ 1.85
TRIM3-205ENST00000527237 C19orf44Q9H6X5 657 aa26.61■■□□□ 1.85
TRIM3-205ENST00000527237 MST1RQ04912 1400 aa26.6■■□□□ 1.85
TRIM3-205ENST00000527237 SLAIN2Q9P270 581 aa26.6■■□□□ 1.85
TRIM3-205ENST00000527237 TECPR2O15040 1411 aa26.59■■□□□ 1.85
TRIM3-205ENST00000527237 DHX57Q6P158 1386 aaKnown RBP26.58■■□□□ 1.85
TRIM3-205ENST00000527237 AHDC1Q5TGY3 1603 aaPredicted RBP26.58■■□□□ 1.85
TRIM3-205ENST00000527237 ATF3P18847 181 aa26.57■■□□□ 1.84
TRIM3-205ENST00000527237 TMEM132EQ6IEE7 984 aa26.57■■□□□ 1.84
TRIM3-205ENST00000527237 ADGRB1O14514 1584 aa26.57■■□□□ 1.84
TRIM3-205ENST00000527237 CDC42BPGQ6DT37 1551 aa26.57■■□□□ 1.84
TRIM3-205ENST00000527237 LRPPRCP42704 1394 aaKnown RBP26.57■■□□□ 1.84
TRIM3-205ENST00000527237 YTHDC2Q9H6S0 1430 aaKnown RBP26.56■■□□□ 1.84
TRIM3-205ENST00000527237 CADPS2Q86UW7 1296 aa26.56■■□□□ 1.84
TRIM3-205ENST00000527237 DISP3Q9P2K9 1392 aa26.56■■□□□ 1.84
TRIM3-205ENST00000527237 FMN2Q9NZ56 1722 aa26.54■■□□□ 1.84
TRIM3-205ENST00000527237 RGPD8O14715 1765 aaPredicted RBP26.54■■□□□ 1.84
TRIM3-205ENST00000527237 CFAP70Q5T0N1 1121 aa26.54■■□□□ 1.84
TRIM3-205ENST00000527237 STK26Q9P289 416 aa26.54■■□□□ 1.84
TRIM3-205ENST00000527237 ARHGEF28Q8N1W1 1705 aaKnown RBP26.53■■□□□ 1.84
TRIM3-205ENST00000527237 C14orf93Q9H972 538 aaKnown RBP26.52■■□□□ 1.84
TRIM3-205ENST00000527237 PLEKHH1Q9ULM0 1364 aa26.52■■□□□ 1.84
TRIM3-205ENST00000527237 KIAA1210Q9ULL0 1709 aa26.51■■□□□ 1.83
TRIM3-205ENST00000527237 DCAF11Q8TEB1 546 aa26.51■■□□□ 1.83
TRIM3-205ENST00000527237 KDM2AQ9Y2K7 1162 aa26.51■■□□□ 1.83
TRIM3-205ENST00000527237 SHPRHQ149N8 1683 aa26.5■■□□□ 1.83
TRIM3-205ENST00000527237 ABCC11Q96J66 1382 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms