RNA–Protein interactions for RNA: ENST00000527215.6

CTSB-213, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-213ENST00000527215 CHGAP10645 457 aaKnown RBP24.28■■□□□ 1.48
CTSB-213ENST00000527215 LRRC7Q96NW7 1537 aa24.28■■□□□ 1.48
CTSB-213ENST00000527215 PIP4K2BP78356 416 aa24.27■■□□□ 1.48
CTSB-213ENST00000527215 ILDR2Q71H61 639 aa24.26■■□□□ 1.47
CTSB-213ENST00000527215 CLTCL1P53675 1640 aa24.25■■□□□ 1.47
CTSB-213ENST00000527215 KIF1BO60333 1816 aa24.25■■□□□ 1.47
CTSB-213ENST00000527215 TRPM2O94759 1503 aa24.24■■□□□ 1.47
CTSB-213ENST00000527215 TRIM52Q96A61 297 aa24.23■■□□□ 1.47
CTSB-213ENST00000527215 CHD2O14647 1828 aaKnown RBP24.22■■□□□ 1.47
CTSB-213ENST00000527215 PLEKHG1Q9ULL1 1385 aa24.22■■□□□ 1.47
CTSB-213ENST00000527215 SLC26A8Q96RN1 970 aa24.22■■□□□ 1.47
CTSB-213ENST00000527215 ALKQ9UM73 1620 aa24.21■■□□□ 1.47
CTSB-213ENST00000527215 SOCS7O14512 581 aa24.21■■□□□ 1.47
CTSB-213ENST00000527215 SENP3Q9H4L4 574 aaPredicted RBP24.21■■□□□ 1.47
CTSB-213ENST00000527215 NWD1Q149M9 1564 aa24.2■■□□□ 1.47
CTSB-213ENST00000527215 PPP1R15AO75807 674 aaPredicted RBP24.2■■□□□ 1.46
CTSB-213ENST00000527215 HSPA1LP34931 641 aa24.2■■□□□ 1.46
CTSB-213ENST00000527215 HDGFP51858 240 aaKnown RBP24.2■■□□□ 1.46
CTSB-213ENST00000527215 BCANQ96GW7 911 aa24.2■■□□□ 1.46
CTSB-213ENST00000527215 NUTM2DQ5VT03 806 aaPredicted RBP24.17■■□□□ 1.46
CTSB-213ENST00000527215 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.17■■□□□ 1.46
CTSB-213ENST00000527215 DIP2AQ14689 1571 aa24.15■■□□□ 1.46
CTSB-213ENST00000527215 KCNA6P17658 529 aa24.14■■□□□ 1.45
CTSB-213ENST00000527215 SLC4A1APQ9BWU0 796 aaKnown RBP24.14■■□□□ 1.45
CTSB-213ENST00000527215 NKTRP30414 1462 aaKnown RBP24.13■■□□□ 1.45
CTSB-213ENST00000527215 MED1Q15648 1581 aaPredicted RBP24.12■■□□□ 1.45
CTSB-213ENST00000527215 ADAMTS13Q76LX8 1427 aa24.11■■□□□ 1.45
CTSB-213ENST00000527215 NRXN3Q9Y4C0 1643 aa24.11■■□□□ 1.45
CTSB-213ENST00000527215 NEXMIFQ5QGS0 1516 aa24.1■■□□□ 1.45
CTSB-213ENST00000527215 ZNF326Q5BKZ1 582 aaKnown RBP24.09■■□□□ 1.45
CTSB-213ENST00000527215 TMEM94Q12767 1356 aa24.08■■□□□ 1.45
CTSB-213ENST00000527215 TBX22Q9Y458 520 aa24.08■■□□□ 1.45
CTSB-213ENST00000527215 SETBP1Q9Y6X0 1596 aa24.07■■□□□ 1.44
CTSB-213ENST00000527215 PROSER2Q86WR7 435 aaPredicted RBP24.06■■□□□ 1.44
CTSB-213ENST00000527215 SETD5Q9C0A6 1442 aa24.06■■□□□ 1.44
CTSB-213ENST00000527215 PPLO60437 1756 aa24.05■■□□□ 1.44
CTSB-213ENST00000527215 FOXD1Q16676 465 aa24.04■■□□□ 1.44
CTSB-213ENST00000527215 RBM33Q96EV2 1170 aaKnown RBP24.04■■□□□ 1.44
CTSB-213ENST00000527215 MPHOSPH9Q99550 1183 aa24.02■■□□□ 1.44
CTSB-213ENST00000527215 PIK3R4Q99570 1358 aa24.02■■□□□ 1.44
CTSB-213ENST00000527215 PHF23Q9BUL5 403 aaPredicted RBP24■■□□□ 1.43
CTSB-213ENST00000527215 XRN1Q8IZH2 1706 aaKnown RBP24■■□□□ 1.43
CTSB-213ENST00000527215 SETD1AO15047 1707 aaKnown RBP23.98■■□□□ 1.43
CTSB-213ENST00000527215 PTPRUQ92729 1446 aa23.97■■□□□ 1.43
CTSB-213ENST00000527215 RAB3GAP2Q9H2M9 1393 aa23.97■■□□□ 1.43
CTSB-213ENST00000527215 IFT172Q9UG01 1749 aa23.97■■□□□ 1.43
CTSB-213ENST00000527215 ROBO1Q9Y6N7 1651 aa23.96■■□□□ 1.43
CTSB-213ENST00000527215 ACIN1Q9UKV3 1341 aaKnown RBP23.96■■□□□ 1.43
CTSB-213ENST00000527215 CCDC144AA2RUR9 1427 aa23.95■■□□□ 1.42
CTSB-213ENST00000527215 MSH6P52701 1360 aa23.95■■□□□ 1.42
CTSB-213ENST00000527215 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.95■■□□□ 1.42
CTSB-213ENST00000527215 FAM135BQ49AJ0 1406 aa23.93■■□□□ 1.42
CTSB-213ENST00000527215 AMOTL2Q9Y2J4 779 aa23.92■■□□□ 1.42
CTSB-213ENST00000527215 NCOA3Q9Y6Q9 1424 aa23.92■■□□□ 1.42
CTSB-213ENST00000527215 METP08581 1390 aa23.91■■□□□ 1.42
CTSB-213ENST00000527215 RPGRIP1LQ68CZ1 1315 aa23.91■■□□□ 1.42
CTSB-213ENST00000527215 VGFO15240 615 aaPredicted RBP23.9■■□□□ 1.42
CTSB-213ENST00000527215 SPATA31E1Q6ZUB1 1445 aa23.89■■□□□ 1.41
CTSB-213ENST00000527215 C14orf37Q86TY3 774 aa23.87■■□□□ 1.41
CTSB-213ENST00000527215 NALCNQ8IZF0 1738 aa23.84■■□□□ 1.41
CTSB-213ENST00000527215 RGL3Q3MIN7 710 aa23.84■■□□□ 1.41
CTSB-213ENST00000527215 PHLPP1O60346 1717 aa23.84■■□□□ 1.41
CTSB-213ENST00000527215 SLAIN2Q9P270 581 aa23.82■■□□□ 1.4
CTSB-213ENST00000527215 C19orf44Q9H6X5 657 aa23.81■■□□□ 1.4
CTSB-213ENST00000527215 ADGRF5Q8IZF2 1346 aa23.79■■□□□ 1.4
CTSB-213ENST00000527215 ANKRD30BQ9BXX2 1392 aa23.78■■□□□ 1.4
CTSB-213ENST00000527215 ATF3P18847 181 aa23.78■■□□□ 1.4
CTSB-213ENST00000527215 DCCP43146 1447 aa23.77■■□□□ 1.4
CTSB-213ENST00000527215 CADPS2Q86UW7 1296 aa23.77■■□□□ 1.4
CTSB-213ENST00000527215 PTCH1Q13635 1447 aa23.76■■□□□ 1.39
CTSB-213ENST00000527215 HRCP23327 699 aa23.76■■□□□ 1.39
CTSB-213ENST00000527215 ADGRL3Q9HAR2 1447 aa23.75■■□□□ 1.39
CTSB-213ENST00000527215 PRAG1Q86YV5 1406 aa23.74■■□□□ 1.39
CTSB-213ENST00000527215 COL16A1Q07092 1604 aaPredicted RBP23.73■■□□□ 1.39
CTSB-213ENST00000527215 KNDC1Q76NI1 1749 aa23.73■■□□□ 1.39
CTSB-213ENST00000527215 PIK3C2GO75747 1445 aa23.73■■□□□ 1.39
CTSB-213ENST00000527215 ROBO2Q9HCK4 1378 aa23.72■■□□□ 1.39
CTSB-213ENST00000527215 ASXL1Q8IXJ9 1541 aa23.72■■□□□ 1.39
CTSB-213ENST00000527215 LAMC1P11047 1609 aa23.71■■□□□ 1.39
CTSB-213ENST00000527215 AHDC1Q5TGY3 1603 aaPredicted RBP23.71■■□□□ 1.39
CTSB-213ENST00000527215 MYOM2P54296 1465 aa23.7■■□□□ 1.38
CTSB-213ENST00000527215 MST1RQ04912 1400 aa23.7■■□□□ 1.38
CTSB-213ENST00000527215 NRXN1Q9ULB1 1477 aa23.68■■□□□ 1.38
CTSB-213ENST00000527215 JCADQ9P266 1359 aa23.68■■□□□ 1.38
CTSB-213ENST00000527215 NHSL1Q5SYE7 1610 aa23.68■■□□□ 1.38
CTSB-213ENST00000527215 RGS17Q9UGC6 210 aaPredicted RBP23.65■■□□□ 1.38
CTSB-213ENST00000527215 BRINP3Q76B58 766 aa23.64■■□□□ 1.37
CTSB-213ENST00000527215 TECPR2O15040 1411 aa23.63■■□□□ 1.37
CTSB-213ENST00000527215 SHPRHQ149N8 1683 aa23.63■■□□□ 1.37
CTSB-213ENST00000527215 LRPPRCP42704 1394 aaKnown RBP23.63■■□□□ 1.37
CTSB-213ENST00000527215 TMEM132EQ6IEE7 984 aa23.62■■□□□ 1.37
CTSB-213ENST00000527215 STK26Q9P289 416 aa23.62■■□□□ 1.37
CTSB-213ENST00000527215 CDC42BPGQ6DT37 1551 aa23.61■■□□□ 1.37
CTSB-213ENST00000527215 YTHDC2Q9H6S0 1430 aaKnown RBP23.6■■□□□ 1.37
CTSB-213ENST00000527215 C14orf93Q9H972 538 aaKnown RBP23.59■■□□□ 1.37
CTSB-213ENST00000527215 C1orf167Q5SNV9 1468 aa23.59■■□□□ 1.37
CTSB-213ENST00000527215 ABCC11Q96J66 1382 aa23.58■■□□□ 1.37
CTSB-213ENST00000527215 SPATA31A6Q5VVP1 1343 aa23.58■■□□□ 1.36
CTSB-213ENST00000527215 CFAP70Q5T0N1 1121 aa23.57■■□□□ 1.36
CTSB-213ENST00000527215 WAPLQ7Z5K2 1190 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms