RNA–Protein interactions for RNA: ENST00000526149.1

CKLF-206, Transcript of chemokine like factor, humanhuman

TSL 2

Gene CKLF, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-206ENST00000526149 FBXO41Q8TF61 875 aa33.37■■■□□ 2.93
CKLF-206ENST00000526149 ACIN1Q9UKV3 1341 aaKnown RBP33.35■■■□□ 2.93
CKLF-206ENST00000526149 NUTM2DQ5VT03 806 aaPredicted RBP33.3■■■□□ 2.92
CKLF-206ENST00000526149 HDGFP51858 240 aaKnown RBP33.29■■■□□ 2.92
CKLF-206ENST00000526149 PLEKHG1Q9ULL1 1385 aa33.29■■■□□ 2.92
CKLF-206ENST00000526149 HRCP23327 699 aa33.28■■■□□ 2.92
CKLF-206ENST00000526149 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.28■■■□□ 2.92
CKLF-206ENST00000526149 SLC26A8Q96RN1 970 aa33.28■■■□□ 2.92
CKLF-206ENST00000526149 IQSEC2Q5JU85 1478 aa33.26■■■□□ 2.92
CKLF-206ENST00000526149 SENP3Q9H4L4 574 aaPredicted RBP33.26■■■□□ 2.91
CKLF-206ENST00000526149 CPS1P31327 1500 aa33.26■■■□□ 2.91
CKLF-206ENST00000526149 STRCP1A6NGW2 1772 aa33.26■■■□□ 2.91
CKLF-206ENST00000526149 PPP1R15AO75807 674 aaPredicted RBP33.25■■■□□ 2.91
CKLF-206ENST00000526149 ZNF326Q5BKZ1 582 aaKnown RBP33.22■■■□□ 2.91
CKLF-206ENST00000526149 BCANQ96GW7 911 aa33.2■■■□□ 2.91
CKLF-206ENST00000526149 KIF1BO60333 1816 aa33.18■■■□□ 2.9
CKLF-206ENST00000526149 ADAMTS13Q76LX8 1427 aa33.17■■■□□ 2.9
CKLF-206ENST00000526149 NEXMIFQ5QGS0 1516 aa33.17■■■□□ 2.9
CKLF-206ENST00000526149 CCDC144AA2RUR9 1427 aa33.15■■■□□ 2.9
CKLF-206ENST00000526149 LRRC7Q96NW7 1537 aa33.15■■■□□ 2.9
CKLF-206ENST00000526149 TBX22Q9Y458 520 aa33.15■■■□□ 2.9
CKLF-206ENST00000526149 KCNA6P17658 529 aa33.14■■■□□ 2.9
CKLF-206ENST00000526149 SPATA31E1Q6ZUB1 1445 aa33.09■■■□□ 2.89
CKLF-206ENST00000526149 RPGRIP1LQ68CZ1 1315 aa33.07■■■□□ 2.88
CKLF-206ENST00000526149 NRXN3Q9Y4C0 1643 aa33.07■■■□□ 2.88
CKLF-206ENST00000526149 ANKRD30BQ9BXX2 1392 aa33.06■■■□□ 2.88
CKLF-206ENST00000526149 NWD1Q149M9 1564 aa33.05■■■□□ 2.88
CKLF-206ENST00000526149 SETBP1Q9Y6X0 1596 aa33.04■■■□□ 2.88
CKLF-206ENST00000526149 DIP2AQ14689 1571 aa33.04■■■□□ 2.88
CKLF-206ENST00000526149 UBAP1LF5GYI3 381 aa33.03■■■□□ 2.88
CKLF-206ENST00000526149 RGL3Q3MIN7 710 aa33.02■■■□□ 2.88
CKLF-206ENST00000526149 VGFO15240 615 aaPredicted RBP33.01■■■□□ 2.87
CKLF-206ENST00000526149 CHD2O14647 1828 aaKnown RBP33■■■□□ 2.87
CKLF-206ENST00000526149 PIK3R4Q99570 1358 aa32.99■■■□□ 2.87
CKLF-206ENST00000526149 PTPRUQ92729 1446 aa32.98■■■□□ 2.87
CKLF-206ENST00000526149 PPLO60437 1756 aa32.98■■■□□ 2.87
CKLF-206ENST00000526149 XIRP1Q702N8 1843 aaKnown RBP32.98■■■□□ 2.87
CKLF-206ENST00000526149 TMEM94Q12767 1356 aa32.97■■■□□ 2.87
CKLF-206ENST00000526149 PROSER2Q86WR7 435 aaPredicted RBP32.97■■■□□ 2.87
CKLF-206ENST00000526149 RBM33Q96EV2 1170 aaKnown RBP32.97■■■□□ 2.87
CKLF-206ENST00000526149 NKTRP30414 1462 aaKnown RBP32.97■■■□□ 2.87
CKLF-206ENST00000526149 ALKQ9UM73 1620 aa32.96■■■□□ 2.87
CKLF-206ENST00000526149 METP08581 1390 aa32.96■■■□□ 2.87
CKLF-206ENST00000526149 TRIM26Q12899 539 aaPredicted RBP32.93■■■□□ 2.86
CKLF-206ENST00000526149 ADGRF5Q8IZF2 1346 aa32.93■■■□□ 2.86
CKLF-206ENST00000526149 TOM1O60784 492 aa32.92■■■□□ 2.86
CKLF-206ENST00000526149 AMOTL2Q9Y2J4 779 aa32.92■■■□□ 2.86
CKLF-206ENST00000526149 IFT172Q9UG01 1749 aa32.89■■■□□ 2.86
CKLF-206ENST00000526149 SETD1AO15047 1707 aaKnown RBP32.85■■■□□ 2.85
CKLF-206ENST00000526149 PIP4K2BP78356 416 aa32.84■■■□□ 2.85
CKLF-206ENST00000526149 XRN1Q8IZH2 1706 aaKnown RBP32.83■■■□□ 2.85
CKLF-206ENST00000526149 NCOA3Q9Y6Q9 1424 aa32.79■■■□□ 2.84
CKLF-206ENST00000526149 SCAF1Q9H7N4 1312 aaKnown RBP32.78■■■□□ 2.84
CKLF-206ENST00000526149 PIK3C2GO75747 1445 aa32.77■■■□□ 2.84
CKLF-206ENST00000526149 NRXN1Q9ULB1 1477 aa32.76■■■□□ 2.84
CKLF-206ENST00000526149 MYOM2P54296 1465 aa32.75■■■□□ 2.83
CKLF-206ENST00000526149 MSH6P52701 1360 aa32.74■■■□□ 2.83
CKLF-206ENST00000526149 DHX57Q6P158 1386 aaKnown RBP32.73■■■□□ 2.83
CKLF-206ENST00000526149 ASXL1Q8IXJ9 1541 aa32.69■■■□□ 2.82
CKLF-206ENST00000526149 ROBO2Q9HCK4 1378 aa32.69■■■□□ 2.82
CKLF-206ENST00000526149 PRAG1Q86YV5 1406 aa32.68■■■□□ 2.82
CKLF-206ENST00000526149 HSPA1LP34931 641 aa32.68■■■□□ 2.82
CKLF-206ENST00000526149 C14orf37Q86TY3 774 aa32.68■■■□□ 2.82
CKLF-206ENST00000526149 DCAF11Q8TEB1 546 aa32.68■■■□□ 2.82
CKLF-206ENST00000526149 C19orf44Q9H6X5 657 aa32.68■■■□□ 2.82
CKLF-206ENST00000526149 C14orf93Q9H972 538 aaKnown RBP32.68■■■□□ 2.82
CKLF-206ENST00000526149 CFAP70Q5T0N1 1121 aa32.66■■■□□ 2.82
CKLF-206ENST00000526149 TMEM132EQ6IEE7 984 aa32.66■■■□□ 2.82
CKLF-206ENST00000526149 KDM2AQ9Y2K7 1162 aa32.66■■■□□ 2.82
CKLF-206ENST00000526149 PTCH1Q13635 1447 aa32.66■■■□□ 2.82
CKLF-206ENST00000526149 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.64■■■□□ 2.82
CKLF-206ENST00000526149 FAM135BQ49AJ0 1406 aa32.63■■■□□ 2.81
CKLF-206ENST00000526149 SLAIN2Q9P270 581 aa32.63■■■□□ 2.81
CKLF-206ENST00000526149 LRPPRCP42704 1394 aaKnown RBP32.61■■■□□ 2.81
CKLF-206ENST00000526149 STAC3Q96MF2 364 aa32.6■■■□□ 2.81
CKLF-206ENST00000526149 SIN3AQ96ST3 1273 aa32.6■■■□□ 2.81
CKLF-206ENST00000526149 STK26Q9P289 416 aa32.6■■■□□ 2.81
CKLF-206ENST00000526149 TECPR2O15040 1411 aa32.59■■■□□ 2.81
CKLF-206ENST00000526149 ABCC11Q96J66 1382 aa32.58■■■□□ 2.81
CKLF-206ENST00000526149 CADPS2Q86UW7 1296 aa32.58■■■□□ 2.81
CKLF-206ENST00000526149 ADGRL3Q9HAR2 1447 aa32.58■■■□□ 2.81
CKLF-206ENST00000526149 ATF3P18847 181 aa32.57■■■□□ 2.8
CKLF-206ENST00000526149 YTHDC2Q9H6S0 1430 aaKnown RBP32.57■■■□□ 2.8
CKLF-206ENST00000526149 DCCP43146 1447 aa32.56■■■□□ 2.8
CKLF-206ENST00000526149 LAMC1P11047 1609 aa32.55■■■□□ 2.8
CKLF-206ENST00000526149 NALCNQ8IZF0 1738 aa32.54■■■□□ 2.8
CKLF-206ENST00000526149 ROBO1Q9Y6N7 1651 aa32.53■■■□□ 2.8
CKLF-206ENST00000526149 WAPLQ7Z5K2 1190 aa32.52■■■□□ 2.8
CKLF-206ENST00000526149 ADGRB1O14514 1584 aa32.51■■■□□ 2.79
CKLF-206ENST00000526149 KNDC1Q76NI1 1749 aa32.5■■■□□ 2.79
CKLF-206ENST00000526149 PLEKHH1Q9ULM0 1364 aa32.49■■■□□ 2.79
CKLF-206ENST00000526149 NEUROD1Q13562 356 aa32.48■■■□□ 2.79
CKLF-206ENST00000526149 MST1RQ04912 1400 aa32.48■■■□□ 2.79
CKLF-206ENST00000526149 SIRT1Q96EB6 747 aa32.47■■■□□ 2.79
CKLF-206ENST00000526149 L3MBTL2Q969R5 705 aa32.46■■■□□ 2.79
CKLF-206ENST00000526149 BRINP3Q76B58 766 aa32.42■■■□□ 2.78
CKLF-206ENST00000526149 PCGF6Q9BYE7 350 aa32.42■■■□□ 2.78
CKLF-206ENST00000526149 DLC1Q96QB1 1528 aa32.38■■■□□ 2.77
CKLF-206ENST00000526149 TRAK1Q9UPV9 953 aa32.38■■■□□ 2.77
CKLF-206ENST00000526149 C1orf167Q5SNV9 1468 aa32.37■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms