RNA–Protein interactions for RNA: ENST00000523669.5

LRRCC1-206, Transcript of leucine rich repeat and coiled-coil centrosomal protein 1, humanhuman

TSL 1 (best)

Gene LRRCC1, Length 1,004 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRCC1-206ENST00000523669 TRPM2O94759 1503 aa34.07■■■■□ 3.04
LRRCC1-206ENST00000523669 SLC26A8Q96RN1 970 aa34.06■■■■□ 3.04
LRRCC1-206ENST00000523669 ALKQ9UM73 1620 aa34.05■■■■□ 3.04
LRRCC1-206ENST00000523669 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.04■■■■□ 3.04
LRRCC1-206ENST00000523669 TRIM52Q96A61 297 aa34.04■■■■□ 3.04
LRRCC1-206ENST00000523669 CLTCL1P53675 1640 aa34.03■■■■□ 3.04
LRRCC1-206ENST00000523669 XIRP1Q702N8 1843 aaKnown RBP34.02■■■■□ 3.04
LRRCC1-206ENST00000523669 NWD1Q149M9 1564 aa34.02■■■■□ 3.04
LRRCC1-206ENST00000523669 TOM1O60784 492 aa34.01■■■■□ 3.03
LRRCC1-206ENST00000523669 PPP1R15AO75807 674 aaPredicted RBP34■■■■□ 3.03
LRRCC1-206ENST00000523669 KCNA6P17658 529 aa34■■■■□ 3.03
LRRCC1-206ENST00000523669 SLC4A1APQ9BWU0 796 aaKnown RBP33.96■■■■□ 3.03
LRRCC1-206ENST00000523669 ADAMTS13Q76LX8 1427 aa33.96■■■■□ 3.03
LRRCC1-206ENST00000523669 NKTRP30414 1462 aaKnown RBP33.95■■■■□ 3.02
LRRCC1-206ENST00000523669 BCANQ96GW7 911 aa33.94■■■■□ 3.02
LRRCC1-206ENST00000523669 TBX22Q9Y458 520 aa33.94■■■■□ 3.02
LRRCC1-206ENST00000523669 CHD2O14647 1828 aaKnown RBP33.94■■■■□ 3.02
LRRCC1-206ENST00000523669 NUTM2DQ5VT03 806 aaPredicted RBP33.93■■■■□ 3.02
LRRCC1-206ENST00000523669 DIP2AQ14689 1571 aa33.93■■■■□ 3.02
LRRCC1-206ENST00000523669 KIF1BO60333 1816 aa33.91■■■■□ 3.02
LRRCC1-206ENST00000523669 SENP3Q9H4L4 574 aaPredicted RBP33.9■■■■□ 3.02
LRRCC1-206ENST00000523669 TMEM94Q12767 1356 aa33.89■■■■□ 3.02
LRRCC1-206ENST00000523669 PIP4K2BP78356 416 aa33.88■■■■□ 3.01
LRRCC1-206ENST00000523669 NEXMIFQ5QGS0 1516 aa33.87■■■■□ 3.01
LRRCC1-206ENST00000523669 SETD5Q9C0A6 1442 aa33.87■■■■□ 3.01
LRRCC1-206ENST00000523669 NRXN3Q9Y4C0 1643 aa33.86■■■■□ 3.01
LRRCC1-206ENST00000523669 SETBP1Q9Y6X0 1596 aa33.85■■■■□ 3.01
LRRCC1-206ENST00000523669 PIK3R4Q99570 1358 aa33.85■■■■□ 3.01
LRRCC1-206ENST00000523669 SCAF1Q9H7N4 1312 aaKnown RBP33.83■■■■□ 3.01
LRRCC1-206ENST00000523669 ZNF326Q5BKZ1 582 aaKnown RBP33.83■■■■□ 3.01
LRRCC1-206ENST00000523669 PROSER2Q86WR7 435 aaPredicted RBP33.83■■■■□ 3.01
LRRCC1-206ENST00000523669 ACIN1Q9UKV3 1341 aaKnown RBP33.82■■■■□ 3.01
LRRCC1-206ENST00000523669 MPHOSPH9Q99550 1183 aa33.81■■■■□ 3
LRRCC1-206ENST00000523669 FOXD1Q16676 465 aa33.8■■■■□ 3
LRRCC1-206ENST00000523669 HSPA1LP34931 641 aa33.78■■■■□ 3
LRRCC1-206ENST00000523669 RBM33Q96EV2 1170 aaKnown RBP33.76■■■□□ 2.99
LRRCC1-206ENST00000523669 PTPRUQ92729 1446 aa33.75■■■□□ 2.99
LRRCC1-206ENST00000523669 RAB3GAP2Q9H2M9 1393 aa33.74■■■□□ 2.99
LRRCC1-206ENST00000523669 NCOA3Q9Y6Q9 1424 aa33.71■■■□□ 2.99
LRRCC1-206ENST00000523669 RPGRIP1LQ68CZ1 1315 aa33.71■■■□□ 2.99
LRRCC1-206ENST00000523669 XRN1Q8IZH2 1706 aaKnown RBP33.7■■■□□ 2.98
LRRCC1-206ENST00000523669 CCDC144AA2RUR9 1427 aa33.7■■■□□ 2.98
LRRCC1-206ENST00000523669 PPLO60437 1756 aa33.69■■■□□ 2.98
LRRCC1-206ENST00000523669 AMOTL2Q9Y2J4 779 aa33.67■■■□□ 2.98
LRRCC1-206ENST00000523669 MSH6P52701 1360 aa33.67■■■□□ 2.98
LRRCC1-206ENST00000523669 FAM135BQ49AJ0 1406 aa33.67■■■□□ 2.98
LRRCC1-206ENST00000523669 METP08581 1390 aa33.66■■■□□ 2.98
LRRCC1-206ENST00000523669 SPATA31E1Q6ZUB1 1445 aa33.66■■■□□ 2.98
LRRCC1-206ENST00000523669 VGFO15240 615 aaPredicted RBP33.65■■■□□ 2.98
LRRCC1-206ENST00000523669 SETD1AO15047 1707 aaKnown RBP33.63■■■□□ 2.97
LRRCC1-206ENST00000523669 DISP3Q9P2K9 1392 aa33.6■■■□□ 2.97
LRRCC1-206ENST00000523669 ROBO1Q9Y6N7 1651 aa33.58■■■□□ 2.97
LRRCC1-206ENST00000523669 IFT172Q9UG01 1749 aa33.57■■■□□ 2.96
LRRCC1-206ENST00000523669 HRCP23327 699 aa33.57■■■□□ 2.96
LRRCC1-206ENST00000523669 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.56■■■□□ 2.96
LRRCC1-206ENST00000523669 C19orf44Q9H6X5 657 aa33.53■■■□□ 2.96
LRRCC1-206ENST00000523669 SLAIN2Q9P270 581 aa33.53■■■□□ 2.96
LRRCC1-206ENST00000523669 ANKRD30BQ9BXX2 1392 aa33.51■■■□□ 2.96
LRRCC1-206ENST00000523669 PRAG1Q86YV5 1406 aa33.51■■■□□ 2.95
LRRCC1-206ENST00000523669 RGL3Q3MIN7 710 aa33.5■■■□□ 2.95
LRRCC1-206ENST00000523669 C14orf37Q86TY3 774 aa33.5■■■□□ 2.95
LRRCC1-206ENST00000523669 MED1Q15648 1581 aaPredicted RBP33.49■■■□□ 2.95
LRRCC1-206ENST00000523669 ADGRF5Q8IZF2 1346 aa33.49■■■□□ 2.95
LRRCC1-206ENST00000523669 DCCP43146 1447 aa33.48■■■□□ 2.95
LRRCC1-206ENST00000523669 CADPS2Q86UW7 1296 aa33.47■■■□□ 2.95
LRRCC1-206ENST00000523669 PTCH1Q13635 1447 aa33.45■■■□□ 2.95
LRRCC1-206ENST00000523669 ATF3P18847 181 aa33.43■■■□□ 2.94
LRRCC1-206ENST00000523669 ADGRL3Q9HAR2 1447 aa33.42■■■□□ 2.94
LRRCC1-206ENST00000523669 PIK3C2GO75747 1445 aa33.41■■■□□ 2.94
LRRCC1-206ENST00000523669 NALCNQ8IZF0 1738 aa33.4■■■□□ 2.94
LRRCC1-206ENST00000523669 ROBO2Q9HCK4 1378 aa33.39■■■□□ 2.94
LRRCC1-206ENST00000523669 ILDR2Q71H61 639 aa33.37■■■□□ 2.93
LRRCC1-206ENST00000523669 NRXN1Q9ULB1 1477 aa33.37■■■□□ 2.93
LRRCC1-206ENST00000523669 MYOM2P54296 1465 aa33.36■■■□□ 2.93
LRRCC1-206ENST00000523669 PHLPP1O60346 1717 aa33.36■■■□□ 2.93
LRRCC1-206ENST00000523669 ASXL1Q8IXJ9 1541 aa33.35■■■□□ 2.93
LRRCC1-206ENST00000523669 MST1RQ04912 1400 aa33.35■■■□□ 2.93
LRRCC1-206ENST00000523669 AHDC1Q5TGY3 1603 aaPredicted RBP33.32■■■□□ 2.92
LRRCC1-206ENST00000523669 COL16A1Q07092 1604 aaPredicted RBP33.31■■■□□ 2.92
LRRCC1-206ENST00000523669 TECPR2O15040 1411 aa33.31■■■□□ 2.92
LRRCC1-206ENST00000523669 BRINP3Q76B58 766 aa33.28■■■□□ 2.92
LRRCC1-206ENST00000523669 LRPPRCP42704 1394 aaKnown RBP33.28■■■□□ 2.92
LRRCC1-206ENST00000523669 KNDC1Q76NI1 1749 aa33.28■■■□□ 2.92
LRRCC1-206ENST00000523669 ABCC11Q96J66 1382 aa33.26■■■□□ 2.92
LRRCC1-206ENST00000523669 C14orf93Q9H972 538 aaKnown RBP33.26■■■□□ 2.91
LRRCC1-206ENST00000523669 LAMC1P11047 1609 aa33.25■■■□□ 2.91
LRRCC1-206ENST00000523669 TMEM132EQ6IEE7 984 aa33.23■■■□□ 2.91
LRRCC1-206ENST00000523669 JCADQ9P266 1359 aa33.21■■■□□ 2.91
LRRCC1-206ENST00000523669 NHSL1Q5SYE7 1610 aa33.2■■■□□ 2.91
LRRCC1-206ENST00000523669 YTHDC2Q9H6S0 1430 aaKnown RBP33.2■■■□□ 2.91
LRRCC1-206ENST00000523669 C1orf167Q5SNV9 1468 aa33.19■■■□□ 2.9
LRRCC1-206ENST00000523669 CFAP70Q5T0N1 1121 aa33.18■■■□□ 2.9
LRRCC1-206ENST00000523669 STK26Q9P289 416 aa33.18■■■□□ 2.9
LRRCC1-206ENST00000523669 CDC42BPGQ6DT37 1551 aa33.17■■■□□ 2.9
LRRCC1-206ENST00000523669 DHX57Q6P158 1386 aaKnown RBP33.14■■■□□ 2.9
LRRCC1-206ENST00000523669 WAPLQ7Z5K2 1190 aa33.14■■■□□ 2.9
LRRCC1-206ENST00000523669 PHF23Q9BUL5 403 aaPredicted RBP33.14■■■□□ 2.9
LRRCC1-206ENST00000523669 PLEKHH1Q9ULM0 1364 aa33.13■■■□□ 2.89
LRRCC1-206ENST00000523669 SIRT1Q96EB6 747 aa33.13■■■□□ 2.89
LRRCC1-206ENST00000523669 STAC3Q96MF2 364 aa33.13■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms