RNA–Protein interactions for RNA: ENST00000523547.1

RAD21-209, Transcript of RAD21 cohesin complex component, human

TSL 3

Gene RAD21, Length 908 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD21-209	ENST00000523547	HFM1	A2PYH4	1435 aa		34.18	■■■■□ 3.06
RAD21-209	ENST00000523547	PIP4K2B	P78356	416 aa		34.17	■■■■□ 3.06
RAD21-209	ENST00000523547	SCAF1	Q9H7N4	1312 aa	Known RBP	34.17	■■■■□ 3.06
RAD21-209	ENST00000523547	PPP1R15A	O75807	674 aa	Predicted RBP	34.16	■■■■□ 3.06
RAD21-209	ENST00000523547	PLEKHG1	Q9ULL1	1385 aa		34.14	■■■■□ 3.06
RAD21-209	ENST00000523547	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	34.14	■■■■□ 3.06
RAD21-209	ENST00000523547	KCNA6	P17658	529 aa		34.13	■■■■□ 3.05
RAD21-209	ENST00000523547	SPHKAP	Q2M3C7	1700 aa		34.1	■■■■□ 3.05
RAD21-209	ENST00000523547	TRIM52	Q96A61	297 aa		34.09	■■■■□ 3.05
RAD21-209	ENST00000523547	SENP3	Q9H4L4	574 aa	Predicted RBP	34.09	■■■■□ 3.05
RAD21-209	ENST00000523547	ALK	Q9UM73	1620 aa		34.08	■■■■□ 3.05
RAD21-209	ENST00000523547	NUTM2D	Q5VT03	806 aa	Predicted RBP	34.05	■■■■□ 3.04
RAD21-209	ENST00000523547	XIRP1	Q702N8	1843 aa	Known RBP	34.03	■■■■□ 3.04
RAD21-209	ENST00000523547	HSPA1L	P34931	641 aa		34.03	■■■■□ 3.04
RAD21-209	ENST00000523547	PROSER2	Q86WR7	435 aa	Predicted RBP	34.02	■■■■□ 3.04
RAD21-209	ENST00000523547	TBX22	Q9Y458	520 aa		34.02	■■■■□ 3.04
RAD21-209	ENST00000523547	TMEM94	Q12767	1356 aa		34.01	■■■■□ 3.04
RAD21-209	ENST00000523547	NWD1	Q149M9	1564 aa		34	■■■■□ 3.03
RAD21-209	ENST00000523547	DISP3	Q9P2K9	1392 aa		33.99	■■■■□ 3.03
RAD21-209	ENST00000523547	NKTR	P30414	1462 aa	Known RBP	33.98	■■■■□ 3.03
RAD21-209	ENST00000523547	TRPM2	O94759	1503 aa		33.98	■■■■□ 3.03
RAD21-209	ENST00000523547	SLC4A1AP	Q9BWU0	796 aa	Known RBP	33.97	■■■■□ 3.03
RAD21-209	ENST00000523547	ADAMTS13	Q76LX8	1427 aa		33.96	■■■■□ 3.03
RAD21-209	ENST00000523547	ZNF326	Q5BKZ1	582 aa	Known RBP	33.95	■■■■□ 3.03
RAD21-209	ENST00000523547	CHD2	O14647	1828 aa	Known RBP	33.95	■■■■□ 3.02
RAD21-209	ENST00000523547	CLTCL1	P53675	1640 aa		33.94	■■■■□ 3.02
RAD21-209	ENST00000523547	RBM33	Q96EV2	1170 aa	Known RBP	33.93	■■■■□ 3.02
RAD21-209	ENST00000523547	DIP2A	Q14689	1571 aa		33.92	■■■■□ 3.02
RAD21-209	ENST00000523547	PIK3R4	Q99570	1358 aa		33.88	■■■■□ 3.01
RAD21-209	ENST00000523547	KIF1B	O60333	1816 aa		33.86	■■■■□ 3.01
RAD21-209	ENST00000523547	MSH6	P52701	1360 aa		33.83	■■■■□ 3.01
RAD21-209	ENST00000523547	SETBP1	Q9Y6X0	1596 aa		33.81	■■■■□ 3
RAD21-209	ENST00000523547	NEXMIF	Q5QGS0	1516 aa		33.8	■■■■□ 3
RAD21-209	ENST00000523547	FAM135B	Q49AJ0	1406 aa		33.79	■■■■□ 3
RAD21-209	ENST00000523547	NRXN3	Q9Y4C0	1643 aa		33.79	■■■■□ 3
RAD21-209	ENST00000523547	FOXD1	Q16676	465 aa		33.78	■■■■□ 3
RAD21-209	ENST00000523547	AMOTL2	Q9Y2J4	779 aa		33.78	■■■■□ 3
RAD21-209	ENST00000523547	NCOA3	Q9Y6Q9	1424 aa		33.78	■■■■□ 3
RAD21-209	ENST00000523547	MPHOSPH9	Q99550	1183 aa		33.77	■■■■□ 3
RAD21-209	ENST00000523547	ACIN1	Q9UKV3	1341 aa	Known RBP	33.76	■■■□□ 2.99
RAD21-209	ENST00000523547	PTPRU	Q92729	1446 aa		33.75	■■■□□ 2.99
RAD21-209	ENST00000523547	SETD5	Q9C0A6	1442 aa		33.74	■■■□□ 2.99
RAD21-209	ENST00000523547	C14orf37	Q86TY3	774 aa		33.73	■■■□□ 2.99
RAD21-209	ENST00000523547	RPGRIP1L	Q68CZ1	1315 aa		33.72	■■■□□ 2.99
RAD21-209	ENST00000523547	VGF	O15240	615 aa	Predicted RBP	33.71	■■■□□ 2.99
RAD21-209	ENST00000523547	ILDR2	Q71H61	639 aa		33.71	■■■□□ 2.99
RAD21-209	ENST00000523547	SLAIN2	Q9P270	581 aa		33.7	■■■□□ 2.99
RAD21-209	ENST00000523547	MET	P08581	1390 aa		33.7	■■■□□ 2.98
RAD21-209	ENST00000523547	MED1	Q15648	1581 aa	Predicted RBP	33.68	■■■□□ 2.98
RAD21-209	ENST00000523547	ROBO1	Q9Y6N7	1651 aa		33.68	■■■□□ 2.98
RAD21-209	ENST00000523547	C19orf44	Q9H6X5	657 aa		33.67	■■■□□ 2.98
RAD21-209	ENST00000523547	CCDC144A	A2RUR9	1427 aa		33.67	■■■□□ 2.98
RAD21-209	ENST00000523547	XRN1	Q8IZH2	1706 aa	Known RBP	33.65	■■■□□ 2.98
RAD21-209	ENST00000523547	CADPS2	Q86UW7	1296 aa		33.62	■■■□□ 2.97
RAD21-209	ENST00000523547	ATF3	P18847	181 aa		33.61	■■■□□ 2.97
RAD21-209	ENST00000523547	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	33.61	■■■□□ 2.97
RAD21-209	ENST00000523547	RAB3GAP2	Q9H2M9	1393 aa		33.6	■■■□□ 2.97
RAD21-209	ENST00000523547	PPL	O60437	1756 aa		33.6	■■■□□ 2.97
RAD21-209	ENST00000523547	SPATA31E1	Q6ZUB1	1445 aa		33.56	■■■□□ 2.96
RAD21-209	ENST00000523547	RGL3	Q3MIN7	710 aa		33.55	■■■□□ 2.96
RAD21-209	ENST00000523547	SETD1A	O15047	1707 aa	Known RBP	33.52	■■■□□ 2.96
RAD21-209	ENST00000523547	DCC	P43146	1447 aa		33.52	■■■□□ 2.96
RAD21-209	ENST00000523547	PHF23	Q9BUL5	403 aa	Predicted RBP	33.51	■■■□□ 2.95
RAD21-209	ENST00000523547	ANKRD30B	Q9BXX2	1392 aa		33.48	■■■□□ 2.95
RAD21-209	ENST00000523547	ADGRF5	Q8IZF2	1346 aa		33.48	■■■□□ 2.95
RAD21-209	ENST00000523547	PHLPP1	O60346	1717 aa		33.48	■■■□□ 2.95
RAD21-209	ENST00000523547	PTCH1	Q13635	1447 aa		33.45	■■■□□ 2.95
RAD21-209	ENST00000523547	ADGRL3	Q9HAR2	1447 aa		33.45	■■■□□ 2.95
RAD21-209	ENST00000523547	SOCS7	O14512	581 aa		33.44	■■■□□ 2.94
RAD21-209	ENST00000523547	HRC	P23327	699 aa		33.43	■■■□□ 2.94
RAD21-209	ENST00000523547	IFT172	Q9UG01	1749 aa		33.42	■■■□□ 2.94
RAD21-209	ENST00000523547	ROBO2	Q9HCK4	1378 aa		33.42	■■■□□ 2.94
RAD21-209	ENST00000523547	PRAG1	Q86YV5	1406 aa		33.41	■■■□□ 2.94
RAD21-209	ENST00000523547	BRINP3	Q76B58	766 aa		33.4	■■■□□ 2.94
RAD21-209	ENST00000523547	MST1R	Q04912	1400 aa		33.39	■■■□□ 2.94
RAD21-209	ENST00000523547	JCAD	Q9P266	1359 aa		33.38	■■■□□ 2.93
RAD21-209	ENST00000523547	NALCN	Q8IZF0	1738 aa		33.38	■■■□□ 2.93
RAD21-209	ENST00000523547	COL16A1	Q07092	1604 aa	Predicted RBP	33.38	■■■□□ 2.93
RAD21-209	ENST00000523547	AHDC1	Q5TGY3	1603 aa	Predicted RBP	33.37	■■■□□ 2.93
RAD21-209	ENST00000523547	PIK3C2G	O75747	1445 aa		33.34	■■■□□ 2.93
RAD21-209	ENST00000523547	ASXL1	Q8IXJ9	1541 aa		33.32	■■■□□ 2.92
RAD21-209	ENST00000523547	STK26	Q9P289	416 aa		33.28	■■■□□ 2.92
RAD21-209	ENST00000523547	LRPPRC	P42704	1394 aa	Known RBP	33.28	■■■□□ 2.92
RAD21-209	ENST00000523547	TMEM132E	Q6IEE7	984 aa		33.27	■■■□□ 2.92
RAD21-209	ENST00000523547	RGS17	Q9UGC6	210 aa	Predicted RBP	33.27	■■■□□ 2.92
RAD21-209	ENST00000523547	TECPR2	O15040	1411 aa		33.26	■■■□□ 2.91
RAD21-209	ENST00000523547	MYOM2	P54296	1465 aa		33.25	■■■□□ 2.91
RAD21-209	ENST00000523547	C1orf167	Q5SNV9	1468 aa		33.25	■■■□□ 2.91
RAD21-209	ENST00000523547	NRXN1	Q9ULB1	1477 aa		33.25	■■■□□ 2.91
RAD21-209	ENST00000523547	ABCC11	Q96J66	1382 aa		33.25	■■■□□ 2.91
RAD21-209	ENST00000523547	C14orf93	Q9H972	538 aa	Known RBP	33.25	■■■□□ 2.91
RAD21-209	ENST00000523547	SPATA31A6	Q5VVP1	1343 aa		33.23	■■■□□ 2.91
RAD21-209	ENST00000523547	NHSL1	Q5SYE7	1610 aa		33.21	■■■□□ 2.91
RAD21-209	ENST00000523547	YTHDC2	Q9H6S0	1430 aa	Known RBP	33.2	■■■□□ 2.91
RAD21-209	ENST00000523547	WAPL	Q7Z5K2	1190 aa		33.2	■■■□□ 2.91
RAD21-209	ENST00000523547	CFAP70	Q5T0N1	1121 aa		33.19	■■■□□ 2.9
RAD21-209	ENST00000523547	SHPRH	Q149N8	1683 aa		33.19	■■■□□ 2.9
RAD21-209	ENST00000523547	KNDC1	Q76NI1	1749 aa		33.18	■■■□□ 2.9
RAD21-209	ENST00000523547	DDX17	Q92841	729 aa	Known RBP	33.17	■■■□□ 2.9
RAD21-209	ENST00000523547	LRRC59	Q96AG4	307 aa	Known RBP	33.16	■■■□□ 2.9

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms