RNA–Protein interactions for RNA: ENST00000523465.1

POLB-214, Transcript of DNA polymerase beta, humanhuman

TSL 3

Gene POLB, Length 649 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-214ENST00000523465 KCNK17Q96T54 332 aa12.24□□□□□ -0.45
POLB-214ENST00000523465 SYNJ1O43426 1573 aa12.23□□□□□ -0.45
POLB-214ENST00000523465 CLASP1Q7Z460 1538 aa12.23□□□□□ -0.45
POLB-214ENST00000523465 OATP04181 439 aa12.23□□□□□ -0.45
POLB-214ENST00000523465 PBRM1Q86U86 1689 aa12.22□□□□□ -0.45
POLB-214ENST00000523465 WDR97A6NE52 1622 aa12.22□□□□□ -0.45
POLB-214ENST00000523465 FAM205CA6NFA0 338 aa12.21□□□□□ -0.45
POLB-214ENST00000523465 AMHR2Q16671 573 aa12.21□□□□□ -0.45
POLB-214ENST00000523465 GRIN2BQ13224 1484 aa12.21□□□□□ -0.46
POLB-214ENST00000523465 MAGI1Q96QZ7 1491 aaPredicted RBP12.21□□□□□ -0.46
POLB-214ENST00000523465 ARHGAP33O14559 1287 aa12.2□□□□□ -0.46
POLB-214ENST00000523465 PBX2P40425 430 aa12.2□□□□□ -0.46
POLB-214ENST00000523465 ADGRG1Q9Y653 693 aa12.19□□□□□ -0.46
POLB-214ENST00000523465 ZNF687Q8N1G0 1237 aa12.18□□□□□ -0.46
POLB-214ENST00000523465 SYNJ2O15056 1496 aa12.18□□□□□ -0.46
POLB-214ENST00000523465 TRIM6-TRIM34B2RNG4 842 aa12.17□□□□□ -0.46
POLB-214ENST00000523465 ONECUT3O60422 494 aaPredicted RBP12.17□□□□□ -0.46
POLB-214ENST00000523465 PACS2Q86VP3 889 aa12.17□□□□□ -0.46
POLB-214ENST00000523465 CDAN1Q8IWY9 1227 aa12.17□□□□□ -0.46
POLB-214ENST00000523465 RBM46Q8TBY0 533 aaKnown RBP12.17□□□□□ -0.46
POLB-214ENST00000523465 GAPVD1Q14C86 1478 aa12.16□□□□□ -0.46
POLB-214ENST00000523465 TTLL12Q14166 644 aaPredicted RBP12.16□□□□□ -0.46
POLB-214ENST00000523465 METTL3Q86U44 580 aaKnown RBP12.16□□□□□ -0.46
POLB-214ENST00000523465 PSEN2P49810 448 aa12.15□□□□□ -0.46
POLB-214ENST00000523465 TMEM132AQ24JP5 1023 aa12.15□□□□□ -0.46
POLB-214ENST00000523465 FAM161AQ3B820 660 aa12.15□□□□□ -0.46
POLB-214ENST00000523465 HS3ST6Q96QI5 342 aa12.15□□□□□ -0.46
POLB-214ENST00000523465 KDM4CQ9H3R0 1056 aa12.15□□□□□ -0.46
POLB-214ENST00000523465 GPBP1L1Q9HC44 474 aaPredicted RBP12.15□□□□□ -0.46
POLB-214ENST00000523465 DAXXQ9UER7 740 aaPredicted RBP12.15□□□□□ -0.46
POLB-214ENST00000523465 TSKSQ9UJT2 592 aa12.15□□□□□ -0.46
POLB-214ENST00000523465 SUPT5HO00267 1087 aaKnown RBP12.14□□□□□ -0.47
POLB-214ENST00000523465 PXYLP1Q8TE99 480 aa12.14□□□□□ -0.47
POLB-214ENST00000523465 FAM198AQ9UFP1 575 aa12.14□□□□□ -0.47
POLB-214ENST00000523465 ABCA5Q8WWZ7 1642 aa12.13□□□□□ -0.47
POLB-214ENST00000523465 NBPF26B4DH59 902 aa12.13□□□□□ -0.47
POLB-214ENST00000523465 CLCN1P35523 988 aa12.13□□□□□ -0.47
POLB-214ENST00000523465 ZBED2Q9BTP6 218 aa12.13□□□□□ -0.47
POLB-214ENST00000523465 PROX2Q3B8N5 592 aa12.12□□□□□ -0.47
POLB-214ENST00000523465 POTEEQ6S8J3 1075 aa12.12□□□□□ -0.47
POLB-214ENST00000523465 PARP9Q8IXQ6 854 aa12.12□□□□□ -0.47
POLB-214ENST00000523465 SLC4A5Q9BY07 1137 aa12.12□□□□□ -0.47
POLB-214ENST00000523465 AXIN2Q9Y2T1 843 aa12.12□□□□□ -0.47
POLB-214ENST00000523465 ABCA10Q8WWZ4 1543 aa12.11□□□□□ -0.47
POLB-214ENST00000523465 NUDT18Q6ZVK8 323 aa12.1□□□□□ -0.47
POLB-214ENST00000523465 TATDN2Q93075 761 aa12.1□□□□□ -0.47
POLB-214ENST00000523465 PHOX2BQ99453 314 aa12.1□□□□□ -0.47
POLB-214ENST00000523465 GPCPD1Q9NPB8 672 aa12.1□□□□□ -0.47
POLB-214ENST00000523465 PNMA3Q9UL41 463 aa12.1□□□□□ -0.47
POLB-214ENST00000523465 ERCC6L2Q5T890 1561 aa12.09□□□□□ -0.47
POLB-214ENST00000523465 MDM2Q00987 491 aaPredicted RBP12.09□□□□□ -0.47
POLB-214ENST00000523465 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.08□□□□□ -0.48
POLB-214ENST00000523465 POTEB3A0JP26 581 aa12.08□□□□□ -0.48
POLB-214ENST00000523465 DMRTA1Q5VZB9 504 aa12.08□□□□□ -0.48
POLB-214ENST00000523465 POTEBQ6S5H4 581 aa12.08□□□□□ -0.48
POLB-214ENST00000523465 EYA1Q99502 592 aa12.08□□□□□ -0.48
POLB-214ENST00000523465 KIAA1468Q9P260 1216 aa12.08□□□□□ -0.48
POLB-214ENST00000523465 GIGYF2Q6Y7W6 1299 aaKnown RBP12.07□□□□□ -0.48
POLB-214ENST00000523465 RABGEF1Q9UJ41 708 aa12.07□□□□□ -0.48
POLB-214ENST00000523465 TMUB1Q9BVT8 246 aa12.06□□□□□ -0.48
POLB-214ENST00000523465 GRIN2AQ12879 1464 aa12.06□□□□□ -0.48
POLB-214ENST00000523465 ADAMTS12P58397 1594 aa12.05□□□□□ -0.48
POLB-214ENST00000523465 CEP170Q5SW79 1584 aa12.05□□□□□ -0.48
POLB-214ENST00000523465 RCCD1A6NED2 376 aa12.05□□□□□ -0.48
POLB-214ENST00000523465 VPS9D1Q9Y2B5 631 aa12.05□□□□□ -0.48
POLB-214ENST00000523465 DNAJB2P25686 324 aa12.04□□□□□ -0.48
POLB-214ENST00000523465 DDRGK1Q96HY6 314 aa12.04□□□□□ -0.48
POLB-214ENST00000523465 REPIN1Q9BWE0 567 aaKnown RBP12.04□□□□□ -0.48
POLB-214ENST00000523465 WRNQ14191 1432 aaPredicted RBP eCLIP12.03□□□□□ -0.48
POLB-214ENST00000523465 TK2O00142 265 aa12.03□□□□□ -0.48
POLB-214ENST00000523465 IL27Q8NEV9 243 aa12.03□□□□□ -0.48
POLB-214ENST00000523465 BIVM-ERCC5R4GMW8 1640 aa12.03□□□□□ -0.48
POLB-214ENST00000523465 C3orf80F5H4A9 247 aa12.02□□□□□ -0.49
POLB-214ENST00000523465 SMAPO00193 183 aa12.02□□□□□ -0.49
POLB-214ENST00000523465 NLRP7Q8WX94 980 aa12.02□□□□□ -0.49
POLB-214ENST00000523465 TOP2BQ02880 1626 aa12.01□□□□□ -0.49
POLB-214ENST00000523465 SSTR3P32745 418 aaPredicted RBP12.01□□□□□ -0.49
POLB-214ENST00000523465 FAM117AQ9C073 453 aa12.01□□□□□ -0.49
POLB-214ENST00000523465 NBPF3Q9H094 633 aa12.01□□□□□ -0.49
POLB-214ENST00000523465 LSM11P83369 360 aaKnown RBP eCLIP12□□□□□ -0.49
POLB-214ENST00000523465 FAM217BQ9NTX9 383 aaPredicted RBP12□□□□□ -0.49
POLB-214ENST00000523465 MS4A1P11836 297 aa11.99□□□□□ -0.49
POLB-214ENST00000523465 TMEM134Q9H6X4 195 aa11.99□□□□□ -0.49
POLB-214ENST00000523465 NUP160Q12769 1436 aa11.99□□□□□ -0.49
POLB-214ENST00000523465 FHAD1B1AJZ9 1412 aa11.98□□□□□ -0.49
POLB-214ENST00000523465 SHROOM2Q13796 1616 aa11.97□□□□□ -0.49
POLB-214ENST00000523465 FAM98CQ17RN3 349 aaKnown RBP11.97□□□□□ -0.49
POLB-214ENST00000523465 LAPTM4BQ86VI4 370 aa11.97□□□□□ -0.49
POLB-214ENST00000523465 SULF1Q8IWU6 871 aa11.97□□□□□ -0.49
POLB-214ENST00000523465 SEPT9Q9UHD8 586 aaPredicted RBP11.97□□□□□ -0.49
POLB-214ENST00000523465 HDGFP51858 240 aaKnown RBP11.96□□□□□ -0.49
POLB-214ENST00000523465 ADGRD1Q6QNK2 874 aa11.96□□□□□ -0.49
POLB-214ENST00000523465 ERICH3Q5RHP9 1530 aa11.95□□□□□ -0.5
POLB-214ENST00000523465 KIF13AQ9H1H9 1805 aa11.95□□□□□ -0.5
POLB-214ENST00000523465 PLEKHG3A1L390 1219 aa11.94□□□□□ -0.5
POLB-214ENST00000523465 BHMG1C9JSJ3 638 aaPredicted RBP11.94□□□□□ -0.5
POLB-214ENST00000523465 ANKRD13DQ6ZTN6 518 aa11.93□□□□□ -0.5
POLB-214ENST00000523465 MRPL50Q8N5N7 158 aaKnown RBP11.93□□□□□ -0.5
POLB-214ENST00000523465 BEGAINQ9BUH8 593 aa11.93□□□□□ -0.5
POLB-214ENST00000523465 PRG4Q92954 1404 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms