RNA–Protein interactions for RNA: ENST00000523465.1

POLB-214, Transcript of DNA polymerase beta, humanhuman

TSL 3

Gene POLB, Length 649 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-214ENST00000523465 AEBP2Q6ZN18 517 aaPredicted RBP27.27■■□□□ 1.96
POLB-214ENST00000523465 CHIC1Q5VXU3 224 aa27■■□□□ 1.91
POLB-214ENST00000523465 PHF23Q9BUL5 403 aaPredicted RBP23.73■■□□□ 1.39
POLB-214ENST00000523465 SENP3Q9H4L4 574 aaPredicted RBP23.19■■□□□ 1.3
POLB-214ENST00000523465 PLPPR3Q6T4P5 718 aa22.1■■□□□ 1.13
POLB-214ENST00000523465 FOXD1Q16676 465 aa21.42■■□□□ 1.02
POLB-214ENST00000523465 ADRA2BP18089 450 aa20.85■□□□□ 0.93
POLB-214ENST00000523465 PPP6R1Q9UPN7 881 aa20.83■□□□□ 0.93
POLB-214ENST00000523465 PIAS4Q8N2W9 510 aaPredicted RBP20.31■□□□□ 0.84
POLB-214ENST00000523465 MSH5O43196 834 aa19.87■□□□□ 0.77
POLB-214ENST00000523465 POTEDQ86YR6 584 aa19.59■□□□□ 0.73
POLB-214ENST00000523465 PPP4R3CPQ6ZMV5 832 aa19.49■□□□□ 0.71
POLB-214ENST00000523465 KCNA4P22459 653 aa19.35■□□□□ 0.69
POLB-214ENST00000523465 SCAF1Q9H7N4 1312 aaKnown RBP19.2■□□□□ 0.66
POLB-214ENST00000523465 NCBP3Q53F19 620 aaKnown RBP19.14■□□□□ 0.65
POLB-214ENST00000523465 CNKSR2Q8WXI2 1034 aa18.9■□□□□ 0.62
POLB-214ENST00000523465 MAPK8IP2Q13387 824 aaPredicted RBP18.8■□□□□ 0.6
POLB-214ENST00000523465 NPM3O75607 178 aaKnown RBP18.77■□□□□ 0.6
POLB-214ENST00000523465 DMRT2Q9Y5R5 561 aa18.54■□□□□ 0.56
POLB-214ENST00000523465 SLC4A1APQ9BWU0 796 aaKnown RBP18.53■□□□□ 0.56
POLB-214ENST00000523465 RNF216Q9NWF9 866 aaPredicted RBP18.45■□□□□ 0.54
POLB-214ENST00000523465 EHMT2Q96KQ7 1210 aa18.32■□□□□ 0.52
POLB-214ENST00000523465 HOXD11P31277 338 aaPredicted RBP18.27■□□□□ 0.52
POLB-214ENST00000523465 DNAJC5BQ9UF47 199 aa18.23■□□□□ 0.51
POLB-214ENST00000523465 CSRNP3Q8WYN3 585 aa17.96■□□□□ 0.47
POLB-214ENST00000523465 ZBTB22O15209 634 aa17.78■□□□□ 0.44
POLB-214ENST00000523465 FOXD4L1Q9NU39 408 aa17.76■□□□□ 0.43
POLB-214ENST00000523465 DCAF8L1A6NGE4 600 aa17.73■□□□□ 0.43
POLB-214ENST00000523465 SLC4A2P04920 1241 aa17.63■□□□□ 0.41
POLB-214ENST00000523465 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.45■□□□□ 0.38
POLB-214ENST00000523465 MYCNP04198 464 aaPredicted RBP17.38■□□□□ 0.37
POLB-214ENST00000523465 ATXN8OSP0DMR3 200 aa17.16■□□□□ 0.34
POLB-214ENST00000523465 U3KPZ7 1027 aaPredicted RBP17.15■□□□□ 0.34
POLB-214ENST00000523465 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.14■□□□□ 0.33
POLB-214ENST00000523465 HNRNPUL2Q1KMD3 747 aaKnown RBP17.14■□□□□ 0.33
POLB-214ENST00000523465 CACNB1Q02641 598 aaPredicted RBP17.08■□□□□ 0.32
POLB-214ENST00000523465 SAMD1Q6SPF0 538 aaPredicted RBP17.07■□□□□ 0.32
POLB-214ENST00000523465 RNF39Q9H2S5 420 aa16.99■□□□□ 0.31
POLB-214ENST00000523465 APLP2Q06481 763 aa16.91■□□□□ 0.3
POLB-214ENST00000523465 NISCHQ9Y2I1 1504 aa16.88■□□□□ 0.29
POLB-214ENST00000523465 ATF5Q9Y2D1 282 aaPredicted RBP16.81■□□□□ 0.28
POLB-214ENST00000523465 C1QBPQ07021 282 aaKnown RBP16.73■□□□□ 0.27
POLB-214ENST00000523465 ZNF219Q9P2Y4 722 aaPredicted RBP16.59■□□□□ 0.25
POLB-214ENST00000523465 SPINK5Q9NQ38 1064 aaPredicted RBP16.56■□□□□ 0.24
POLB-214ENST00000523465 CAPN15O75808 1086 aa16.54■□□□□ 0.24
POLB-214ENST00000523465 TRHP20396 242 aaPredicted RBP16.52■□□□□ 0.24
POLB-214ENST00000523465 POLA2Q14181 598 aa16.32■□□□□ 0.2
POLB-214ENST00000523465 FKBP8Q14318 412 aa16.24■□□□□ 0.19
POLB-214ENST00000523465 ABCB7O75027 752 aa16.21■□□□□ 0.19
POLB-214ENST00000523465 FBLN2P98095 1184 aa16.2■□□□□ 0.18
POLB-214ENST00000523465 DSG3P32926 999 aa16.15■□□□□ 0.18
POLB-214ENST00000523465 ZBTB12Q9Y330 459 aaPredicted RBP16.15■□□□□ 0.18
POLB-214ENST00000523465 MKRN4PQ13434 485 aaPredicted RBP16.11■□□□□ 0.17
POLB-214ENST00000523465 SPDYE4A6NLX3 237 aa15.95■□□□□ 0.14
POLB-214ENST00000523465 OSCARQ8IYS5 282 aa15.73■□□□□ 0.11
POLB-214ENST00000523465 PROM2Q8N271 834 aa15.71■□□□□ 0.11
POLB-214ENST00000523465 SPDYE2BA6NHP3 402 aa15.7■□□□□ 0.1
POLB-214ENST00000523465 SPDYE6P0CI01 402 aa15.7■□□□□ 0.1
POLB-214ENST00000523465 SPDYE2Q495Y8 402 aa15.7■□□□□ 0.1
POLB-214ENST00000523465 ZNF692Q9BU19 519 aaPredicted RBP15.68■□□□□ 0.1
POLB-214ENST00000523465 FBXO3Q9UK99 471 aa15.67■□□□□ 0.1
POLB-214ENST00000523465 SSUH2Q9Y2M2 353 aa15.57■□□□□ 0.08
POLB-214ENST00000523465 PABPN1Q86U42 306 aaKnown RBP eCLIP15.46■□□□□ 0.07
POLB-214ENST00000523465 RBM42Q9BTD8 480 aaKnown RBP15.46■□□□□ 0.07
POLB-214ENST00000523465 ABCC9O60706 1549 aa15.4■□□□□ 0.06
POLB-214ENST00000523465 AMER1Q5JTC6 1135 aaPredicted RBP15.4■□□□□ 0.06
POLB-214ENST00000523465 VASPP50552 380 aaPredicted RBP15.38■□□□□ 0.05
POLB-214ENST00000523465 STAG3Q9UJ98 1225 aa15.34■□□□□ 0.05
POLB-214ENST00000523465 POTEHQ6S545 545 aa15.31■□□□□ 0.04
POLB-214ENST00000523465 AKT1S1Q96B36 256 aa15.31■□□□□ 0.04
POLB-214ENST00000523465 RTN4Q9NQC3 1192 aaKnown RBP15.28■□□□□ 0.04
POLB-214ENST00000523465 CCDC180Q9P1Z9 1646 aa15.21■□□□□ 0.02
POLB-214ENST00000523465 SPDYE1Q8NFV5 336 aaPredicted RBP15.17■□□□□ 0.02
POLB-214ENST00000523465 IFNLR1Q8IU57 520 aaPredicted RBP15.16■□□□□ 0.02
POLB-214ENST00000523465 PLCD3Q8N3E9 789 aa15.14■□□□□ 0.01
POLB-214ENST00000523465 REM2Q8IYK8 340 aaPredicted RBP15.13■□□□□ 0.01
POLB-214ENST00000523465 MIER1Q8N108 512 aa15.12■□□□□ 0.01
POLB-214ENST00000523465 PLEKHG5O94827 1062 aa15.08■□□□□ 0
POLB-214ENST00000523465 KLHL34Q8N239 644 aa15.08■□□□□ 0
POLB-214ENST00000523465 CLEC11AQ9Y240 323 aa15.06■□□□□ 0
POLB-214ENST00000523465 ZBTB47Q9UFB7 747 aaPredicted RBP15□□□□□ -0.01
POLB-214ENST00000523465 SPOCK2Q92563 424 aa14.99□□□□□ -0.01
POLB-214ENST00000523465 PRR29P0C7W0 189 aa14.98□□□□□ -0.01
POLB-214ENST00000523465 PITPNM1O00562 1244 aa14.95□□□□□ -0.02
POLB-214ENST00000523465 CHRDL2Q6WN34 429 aa14.82□□□□□ -0.04
POLB-214ENST00000523465 CREBZFQ9NS37 354 aa14.82□□□□□ -0.04
POLB-214ENST00000523465 PKD2Q13563 968 aa14.77□□□□□ -0.05
POLB-214ENST00000523465 MNX1P50219 401 aaPredicted RBP14.7□□□□□ -0.06
POLB-214ENST00000523465 CIZ1Q9ULV3 898 aaPredicted RBP14.69□□□□□ -0.06
POLB-214ENST00000523465 ECM2O94769 699 aaPredicted RBP14.67□□□□□ -0.06
POLB-214ENST00000523465 NPM1P06748 294 aaKnown RBP eCLIP14.66□□□□□ -0.06
POLB-214ENST00000523465 NUBP1P53384 320 aa14.66□□□□□ -0.06
POLB-214ENST00000523465 GSE1Q14687 1217 aa14.64□□□□□ -0.07
POLB-214ENST00000523465 CHADLQ6NUI6 762 aa14.62□□□□□ -0.07
POLB-214ENST00000523465 TRIM41Q8WV44 630 aa14.62□□□□□ -0.07
POLB-214ENST00000523465 FXR2P51116 673 aaKnown RBP eCLIP14.61□□□□□ -0.07
POLB-214ENST00000523465 PRKAR2AP13861 404 aaKnown RBP14.59□□□□□ -0.07
POLB-214ENST00000523465 FAM212AQ96EL1 285 aa14.59□□□□□ -0.07
POLB-214ENST00000523465 DCAF8L2P0C7V8 631 aa14.58□□□□□ -0.08
POLB-214ENST00000523465 DCAF8Q5TAQ9 597 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms