RNA–Protein interactions for RNA: ENST00000520199.5

CLK4-205, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-205ENST00000520199 HSPA1LP34931 641 aa23.8■■□□□ 1.4
CLK4-205ENST00000520199 RIMS2Q9UQ26 1411 aa23.8■■□□□ 1.4
CLK4-205ENST00000520199 NWD1Q149M9 1564 aa23.79■■□□□ 1.4
CLK4-205ENST00000520199 TOM1O60784 492 aa23.79■■□□□ 1.4
CLK4-205ENST00000520199 SENP3Q9H4L4 574 aaPredicted RBP23.79■■□□□ 1.4
CLK4-205ENST00000520199 ILDR2Q71H61 639 aa23.78■■□□□ 1.4
CLK4-205ENST00000520199 PLEKHG1Q9ULL1 1385 aa23.76■■□□□ 1.39
CLK4-205ENST00000520199 KCNA6P17658 529 aa23.75■■□□□ 1.39
CLK4-205ENST00000520199 ADAMTS13Q76LX8 1427 aa23.75■■□□□ 1.39
CLK4-205ENST00000520199 NUTM2DQ5VT03 806 aaPredicted RBP23.74■■□□□ 1.39
CLK4-205ENST00000520199 RBM33Q96EV2 1170 aaKnown RBP23.74■■□□□ 1.39
CLK4-205ENST00000520199 DISP3Q9P2K9 1392 aa23.74■■□□□ 1.39
CLK4-205ENST00000520199 CLTCL1P53675 1640 aa23.73■■□□□ 1.39
CLK4-205ENST00000520199 SCAF1Q9H7N4 1312 aaKnown RBP23.72■■□□□ 1.39
CLK4-205ENST00000520199 TMEM94Q12767 1356 aa23.72■■□□□ 1.39
CLK4-205ENST00000520199 HFM1A2PYH4 1435 aa23.72■■□□□ 1.39
CLK4-205ENST00000520199 NRXN3Q9Y4C0 1643 aa23.72■■□□□ 1.39
CLK4-205ENST00000520199 CHGAP10645 457 aaKnown RBP23.69■■□□□ 1.38
CLK4-205ENST00000520199 NKTRP30414 1462 aaKnown RBP23.68■■□□□ 1.38
CLK4-205ENST00000520199 TRPM2O94759 1503 aa23.66■■□□□ 1.38
CLK4-205ENST00000520199 TBX22Q9Y458 520 aa23.66■■□□□ 1.38
CLK4-205ENST00000520199 PROSER2Q86WR7 435 aaPredicted RBP23.64■■□□□ 1.37
CLK4-205ENST00000520199 PTPRUQ92729 1446 aa23.64■■□□□ 1.37
CLK4-205ENST00000520199 MED1Q15648 1581 aaPredicted RBP23.64■■□□□ 1.37
CLK4-205ENST00000520199 KIF1BO60333 1816 aa23.63■■□□□ 1.37
CLK4-205ENST00000520199 NEXMIFQ5QGS0 1516 aa23.62■■□□□ 1.37
CLK4-205ENST00000520199 DIP2AQ14689 1571 aa23.61■■□□□ 1.37
CLK4-205ENST00000520199 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.61■■□□□ 1.37
CLK4-205ENST00000520199 BCANQ96GW7 911 aa23.61■■□□□ 1.37
CLK4-205ENST00000520199 PPP1R15AO75807 674 aaPredicted RBP23.6■■□□□ 1.37
CLK4-205ENST00000520199 SETBP1Q9Y6X0 1596 aa23.6■■□□□ 1.37
CLK4-205ENST00000520199 ROBO1Q9Y6N7 1651 aa23.6■■□□□ 1.37
CLK4-205ENST00000520199 HDGFP51858 240 aaKnown RBP23.58■■□□□ 1.37
CLK4-205ENST00000520199 FAM135BQ49AJ0 1406 aa23.58■■□□□ 1.36
CLK4-205ENST00000520199 XRN1Q8IZH2 1706 aaKnown RBP23.57■■□□□ 1.36
CLK4-205ENST00000520199 SETD1AO15047 1707 aaKnown RBP23.56■■□□□ 1.36
CLK4-205ENST00000520199 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.56■■□□□ 1.36
CLK4-205ENST00000520199 TRIM52Q96A61 297 aa23.54■■□□□ 1.36
CLK4-205ENST00000520199 PIK3R4Q99570 1358 aa23.53■■□□□ 1.36
CLK4-205ENST00000520199 FOXD1Q16676 465 aa23.53■■□□□ 1.36
CLK4-205ENST00000520199 METP08581 1390 aa23.52■■□□□ 1.36
CLK4-205ENST00000520199 PPLO60437 1756 aa23.52■■□□□ 1.36
CLK4-205ENST00000520199 SLC4A1APQ9BWU0 796 aaKnown RBP23.5■■□□□ 1.35
CLK4-205ENST00000520199 AMOTL2Q9Y2J4 779 aa23.49■■□□□ 1.35
CLK4-205ENST00000520199 NCOA3Q9Y6Q9 1424 aa23.49■■□□□ 1.35
CLK4-205ENST00000520199 ZNF326Q5BKZ1 582 aaKnown RBP23.48■■□□□ 1.35
CLK4-205ENST00000520199 MSH6P52701 1360 aa23.48■■□□□ 1.35
CLK4-205ENST00000520199 SLAIN2Q9P270 581 aa23.47■■□□□ 1.35
CLK4-205ENST00000520199 PHLPP1O60346 1717 aa23.43■■□□□ 1.34
CLK4-205ENST00000520199 IFT172Q9UG01 1749 aa23.43■■□□□ 1.34
CLK4-205ENST00000520199 MPHOSPH9Q99550 1183 aa23.43■■□□□ 1.34
CLK4-205ENST00000520199 SOCS7O14512 581 aa23.42■■□□□ 1.34
CLK4-205ENST00000520199 COL16A1Q07092 1604 aaPredicted RBP23.41■■□□□ 1.34
CLK4-205ENST00000520199 RGS17Q9UGC6 210 aaPredicted RBP23.41■■□□□ 1.34
CLK4-205ENST00000520199 NALCNQ8IZF0 1738 aa23.41■■□□□ 1.34
CLK4-205ENST00000520199 SPATA31E1Q6ZUB1 1445 aa23.41■■□□□ 1.34
CLK4-205ENST00000520199 C19orf44Q9H6X5 657 aa23.4■■□□□ 1.34
CLK4-205ENST00000520199 SETD5Q9C0A6 1442 aa23.36■■□□□ 1.33
CLK4-205ENST00000520199 RPGRIP1LQ68CZ1 1315 aa23.34■■□□□ 1.33
CLK4-205ENST00000520199 ADGRF5Q8IZF2 1346 aa23.33■■□□□ 1.33
CLK4-205ENST00000520199 AHDC1Q5TGY3 1603 aaPredicted RBP23.33■■□□□ 1.33
CLK4-205ENST00000520199 ROBO2Q9HCK4 1378 aa23.33■■□□□ 1.33
CLK4-205ENST00000520199 MST1RQ04912 1400 aa23.33■■□□□ 1.32
CLK4-205ENST00000520199 VGFO15240 615 aaPredicted RBP23.32■■□□□ 1.32
CLK4-205ENST00000520199 C14orf37Q86TY3 774 aa23.32■■□□□ 1.32
CLK4-205ENST00000520199 CADPS2Q86UW7 1296 aa23.32■■□□□ 1.32
CLK4-205ENST00000520199 DCCP43146 1447 aa23.32■■□□□ 1.32
CLK4-205ENST00000520199 PRAG1Q86YV5 1406 aa23.32■■□□□ 1.32
CLK4-205ENST00000520199 RAB3GAP2Q9H2M9 1393 aa23.31■■□□□ 1.32
CLK4-205ENST00000520199 BRINP3Q76B58 766 aa23.3■■□□□ 1.32
CLK4-205ENST00000520199 CCDC144AA2RUR9 1427 aa23.3■■□□□ 1.32
CLK4-205ENST00000520199 ADGRL3Q9HAR2 1447 aa23.3■■□□□ 1.32
CLK4-205ENST00000520199 ASXL1Q8IXJ9 1541 aa23.29■■□□□ 1.32
CLK4-205ENST00000520199 ATF3P18847 181 aa23.29■■□□□ 1.32
CLK4-205ENST00000520199 PTCH1Q13635 1447 aa23.28■■□□□ 1.32
CLK4-205ENST00000520199 RGL3Q3MIN7 710 aa23.28■■□□□ 1.32
CLK4-205ENST00000520199 NHSL1Q5SYE7 1610 aa23.28■■□□□ 1.32
CLK4-205ENST00000520199 LRP6O75581 1613 aa23.26■■□□□ 1.31
CLK4-205ENST00000520199 SHPRHQ149N8 1683 aa23.25■■□□□ 1.31
CLK4-205ENST00000520199 JCADQ9P266 1359 aa23.24■■□□□ 1.31
CLK4-205ENST00000520199 PHF23Q9BUL5 403 aaPredicted RBP23.23■■□□□ 1.31
CLK4-205ENST00000520199 POTEAQ6S8J7 498 aa23.22■■□□□ 1.31
CLK4-205ENST00000520199 DDX17Q92841 729 aaKnown RBP23.22■■□□□ 1.31
CLK4-205ENST00000520199 PIK3C2GO75747 1445 aa23.22■■□□□ 1.31
CLK4-205ENST00000520199 LAMC1P11047 1609 aa23.21■■□□□ 1.31
CLK4-205ENST00000520199 NRXN1Q9ULB1 1477 aa23.2■■□□□ 1.3
CLK4-205ENST00000520199 KNDC1Q76NI1 1749 aa23.19■■□□□ 1.3
CLK4-205ENST00000520199 C1orf167Q5SNV9 1468 aa23.19■■□□□ 1.3
CLK4-205ENST00000520199 ANKRD30BQ9BXX2 1392 aa23.19■■□□□ 1.3
CLK4-205ENST00000520199 TECPR2O15040 1411 aa23.17■■□□□ 1.3
CLK4-205ENST00000520199 TMEM132EQ6IEE7 984 aa23.17■■□□□ 1.3
CLK4-205ENST00000520199 PLEKHH1Q9ULM0 1364 aa23.14■■□□□ 1.3
CLK4-205ENST00000520199 WAPLQ7Z5K2 1190 aa23.14■■□□□ 1.29
CLK4-205ENST00000520199 LRPPRCP42704 1394 aaKnown RBP23.14■■□□□ 1.29
CLK4-205ENST00000520199 ORAI2Q96SN7 254 aa23.13■■□□□ 1.29
CLK4-205ENST00000520199 MYOM2P54296 1465 aa23.12■■□□□ 1.29
CLK4-205ENST00000520199 ABCC11Q96J66 1382 aa23.12■■□□□ 1.29
CLK4-205ENST00000520199 ACIN1Q9UKV3 1341 aaKnown RBP23.11■■□□□ 1.29
CLK4-205ENST00000520199 CDC42BPGQ6DT37 1551 aa23.11■■□□□ 1.29
CLK4-205ENST00000520199 C14orf93Q9H972 538 aaKnown RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms