RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 TONSLQ96HA7 1378 aa20.46■□□□□ 0.87
SDC2-203ENST00000519587 SIN3AQ96ST3 1273 aa20.46■□□□□ 0.87
SDC2-203ENST00000519587 IFT172Q9UG01 1749 aa20.44■□□□□ 0.86
SDC2-203ENST00000519587 PPLO60437 1756 aa20.43■□□□□ 0.86
SDC2-203ENST00000519587 ZNF326Q5BKZ1 582 aaKnown RBP20.42■□□□□ 0.86
SDC2-203ENST00000519587 THEMISQ8N1K5 641 aaPredicted RBP20.41■□□□□ 0.86
SDC2-203ENST00000519587 RPGRIP1LQ68CZ1 1315 aa20.4■□□□□ 0.86
SDC2-203ENST00000519587 TIMELESSQ9UNS1 1208 aa20.4■□□□□ 0.86
SDC2-203ENST00000519587 SLIT1O75093 1534 aa20.39■□□□□ 0.85
SDC2-203ENST00000519587 NEXMIFQ5QGS0 1516 aa20.39■□□□□ 0.85
SDC2-203ENST00000519587 RGL3Q3MIN7 710 aa20.38■□□□□ 0.85
SDC2-203ENST00000519587 MYOM2P54296 1465 aa20.37■□□□□ 0.85
SDC2-203ENST00000519587 ARHGAP23Q9P227 1491 aa20.37■□□□□ 0.85
SDC2-203ENST00000519587 TMEM2Q9UHN6 1383 aa20.37■□□□□ 0.85
SDC2-203ENST00000519587 POLR1AO95602 1720 aaPredicted RBP20.37■□□□□ 0.85
SDC2-203ENST00000519587 RIMS2Q9UQ26 1411 aa20.36■□□□□ 0.85
SDC2-203ENST00000519587 HDGFP51858 240 aaKnown RBP20.36■□□□□ 0.85
SDC2-203ENST00000519587 STAC3Q96MF2 364 aa20.36■□□□□ 0.85
SDC2-203ENST00000519587 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.35■□□□□ 0.85
SDC2-203ENST00000519587 ZFYVE9O95405 1425 aa20.35■□□□□ 0.85
SDC2-203ENST00000519587 PPP1R15AO75807 674 aaPredicted RBP20.33■□□□□ 0.85
SDC2-203ENST00000519587 EID1Q9Y6B2 187 aa20.33■□□□□ 0.85
SDC2-203ENST00000519587 SCAF11Q99590 1463 aaKnown RBP20.32■□□□□ 0.84
SDC2-203ENST00000519587 L3MBTL2Q969R5 705 aa20.32■□□□□ 0.84
SDC2-203ENST00000519587 VGFO15240 615 aaPredicted RBP20.31■□□□□ 0.84
SDC2-203ENST00000519587 ZEB1P37275 1124 aaPredicted RBP20.31■□□□□ 0.84
SDC2-203ENST00000519587 DCAF11Q8TEB1 546 aa20.31■□□□□ 0.84
SDC2-203ENST00000519587 LAMC1P11047 1609 aa20.3■□□□□ 0.84
SDC2-203ENST00000519587 UBAP1LF5GYI3 381 aa20.29■□□□□ 0.84
SDC2-203ENST00000519587 NRXN1Q9ULB1 1477 aa20.27■□□□□ 0.84
SDC2-203ENST00000519587 ANKLE2Q86XL3 938 aa20.27■□□□□ 0.84
SDC2-203ENST00000519587 TXNDC2Q86VQ3 553 aa20.26■□□□□ 0.83
SDC2-203ENST00000519587 KDM2AQ9Y2K7 1162 aa20.26■□□□□ 0.83
SDC2-203ENST00000519587 SETBP1Q9Y6X0 1596 aa20.25■□□□□ 0.83
SDC2-203ENST00000519587 KIAA1210Q9ULL0 1709 aa20.25■□□□□ 0.83
SDC2-203ENST00000519587 PLEKHG1Q9ULL1 1385 aa20.25■□□□□ 0.83
SDC2-203ENST00000519587 PIK3C2GO75747 1445 aa20.25■□□□□ 0.83
SDC2-203ENST00000519587 PRAG1Q86YV5 1406 aa20.25■□□□□ 0.83
SDC2-203ENST00000519587 IQGAP1P46940 1657 aa20.25■□□□□ 0.83
SDC2-203ENST00000519587 DIP2AQ14689 1571 aa20.24■□□□□ 0.83
SDC2-203ENST00000519587 MED1Q15648 1581 aaPredicted RBP20.24■□□□□ 0.83
SDC2-203ENST00000519587 ZNF335Q9H4Z2 1342 aaPredicted RBP20.24■□□□□ 0.83
SDC2-203ENST00000519587 MED14O60244 1454 aa20.22■□□□□ 0.83
SDC2-203ENST00000519587 TRPM1Q7Z4N2 1603 aa20.21■□□□□ 0.83
SDC2-203ENST00000519587 NRXN3Q9Y4C0 1643 aa20.21■□□□□ 0.83
SDC2-203ENST00000519587 LTKP29376 864 aa20.21■□□□□ 0.83
SDC2-203ENST00000519587 NUTM2DQ5VT03 806 aaPredicted RBP20.21■□□□□ 0.83
SDC2-203ENST00000519587 ADGRF5Q8IZF2 1346 aa20.21■□□□□ 0.83
SDC2-203ENST00000519587 NPHP4O75161 1426 aaPredicted RBP20.2■□□□□ 0.82
SDC2-203ENST00000519587 BCANQ96GW7 911 aa20.19■□□□□ 0.82
SDC2-203ENST00000519587 RALGAPBQ86X10 1494 aa20.18■□□□□ 0.82
SDC2-203ENST00000519587 ALKQ9UM73 1620 aa20.18■□□□□ 0.82
SDC2-203ENST00000519587 NCKAP5LQ9HCH0 1330 aa20.18■□□□□ 0.82
SDC2-203ENST00000519587 SETD1AO15047 1707 aaKnown RBP20.17■□□□□ 0.82
SDC2-203ENST00000519587 ADAMTS13Q76LX8 1427 aa20.13■□□□□ 0.81
SDC2-203ENST00000519587 ROCK2O75116 1388 aaKnown RBP20.12■□□□□ 0.81
SDC2-203ENST00000519587 HSPA1LP34931 641 aa20.11■□□□□ 0.81
SDC2-203ENST00000519587 NBPF8Q3BBV2 869 aa20.11■□□□□ 0.81
SDC2-203ENST00000519587 C14orf93Q9H972 538 aaKnown RBP20.11■□□□□ 0.81
SDC2-203ENST00000519587 SCAF1Q9H7N4 1312 aaKnown RBP20.1■□□□□ 0.81
SDC2-203ENST00000519587 ADGRB1O14514 1584 aa20.09■□□□□ 0.81
SDC2-203ENST00000519587 ASXL1Q8IXJ9 1541 aa20.09■□□□□ 0.81
SDC2-203ENST00000519587 CFAP70Q5T0N1 1121 aa20.09■□□□□ 0.81
SDC2-203ENST00000519587 SENP3Q9H4L4 574 aaPredicted RBP20.09■□□□□ 0.81
SDC2-203ENST00000519587 TBX22Q9Y458 520 aa20.09■□□□□ 0.81
SDC2-203ENST00000519587 PIK3R4Q99570 1358 aa20.08■□□□□ 0.81
SDC2-203ENST00000519587 GPRASP1Q5JY77 1395 aa20.08■□□□□ 0.8
SDC2-203ENST00000519587 KNDC1Q76NI1 1749 aa20.07■□□□□ 0.8
SDC2-203ENST00000519587 SLC26A8Q96RN1 970 aa20.07■□□□□ 0.8
SDC2-203ENST00000519587 PIP4K2BP78356 416 aa20.06■□□□□ 0.8
SDC2-203ENST00000519587 CHD2O14647 1828 aaKnown RBP20.05■□□□□ 0.8
SDC2-203ENST00000519587 XRN1Q8IZH2 1706 aaKnown RBP20.05■□□□□ 0.8
SDC2-203ENST00000519587 NWD1Q149M9 1564 aa20.04■□□□□ 0.8
SDC2-203ENST00000519587 PHF23Q9BUL5 403 aaPredicted RBP20.04■□□□□ 0.8
SDC2-203ENST00000519587 METP08581 1390 aa20.04■□□□□ 0.8
SDC2-203ENST00000519587 YTHDC2Q9H6S0 1430 aaKnown RBP20.03■□□□□ 0.8
SDC2-203ENST00000519587 CARD11Q9BXL7 1154 aa20.03■□□□□ 0.8
SDC2-203ENST00000519587 EIF3AQ14152 1382 aaKnown RBP20.03■□□□□ 0.8
SDC2-203ENST00000519587 NBPF1Q3BBV0 1214 aa20.02■□□□□ 0.8
SDC2-203ENST00000519587 LRPPRCP42704 1394 aaKnown RBP20.02■□□□□ 0.8
SDC2-203ENST00000519587 ARHGEF28Q8N1W1 1705 aaKnown RBP20.02■□□□□ 0.79
SDC2-203ENST00000519587 CPS1P31327 1500 aa20.02■□□□□ 0.79
SDC2-203ENST00000519587 TOM1O60784 492 aa20.01■□□□□ 0.79
SDC2-203ENST00000519587 DLC1Q96QB1 1528 aa20.01■□□□□ 0.79
SDC2-203ENST00000519587 NKTRP30414 1462 aaKnown RBP20■□□□□ 0.79
SDC2-203ENST00000519587 TECPR2O15040 1411 aa20■□□□□ 0.79
SDC2-203ENST00000519587 TMEM132EQ6IEE7 984 aa19.99■□□□□ 0.79
SDC2-203ENST00000519587 PTCH1Q13635 1447 aa19.99■□□□□ 0.79
SDC2-203ENST00000519587 ABCC11Q96J66 1382 aa19.98■□□□□ 0.79
SDC2-203ENST00000519587 USP47Q96K76 1375 aa19.96■□□□□ 0.79
SDC2-203ENST00000519587 PTPRUQ92729 1446 aa19.96■□□□□ 0.79
SDC2-203ENST00000519587 KCNA6P17658 529 aa19.95■□□□□ 0.78
SDC2-203ENST00000519587 STK26Q9P289 416 aa19.95■□□□□ 0.78
SDC2-203ENST00000519587 FAM135BQ49AJ0 1406 aa19.94■□□□□ 0.78
SDC2-203ENST00000519587 QRICH2Q9H0J4 1663 aa19.94■□□□□ 0.78
SDC2-203ENST00000519587 AMOTL2Q9Y2J4 779 aa19.94■□□□□ 0.78
SDC2-203ENST00000519587 STRCP1A6NGW2 1772 aa19.93■□□□□ 0.78
SDC2-203ENST00000519587 TRAK1Q9UPV9 953 aa19.93■□□□□ 0.78
SDC2-203ENST00000519587 EIF4G2P78344 907 aaKnown RBP eCLIP19.92■□□□□ 0.78
SDC2-203ENST00000519587 SIRT1Q96EB6 747 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms