RNA–Protein interactions for RNA: ENST00000517554.1

MTCL1-204, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MTCL1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-204ENST00000517554 HRCP23327 699 aa31.39■■■□□ 2.62
MTCL1-204ENST00000517554 NUTM2DQ5VT03 806 aaPredicted RBP31.36■■■□□ 2.61
MTCL1-204ENST00000517554 SENP3Q9H4L4 574 aaPredicted RBP31.33■■■□□ 2.61
MTCL1-204ENST00000517554 PLEKHG1Q9ULL1 1385 aa31.32■■■□□ 2.6
MTCL1-204ENST00000517554 SLC26A8Q96RN1 970 aa31.31■■■□□ 2.6
MTCL1-204ENST00000517554 HDGFP51858 240 aaKnown RBP31.3■■■□□ 2.6
MTCL1-204ENST00000517554 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.3■■■□□ 2.6
MTCL1-204ENST00000517554 STRCP1A6NGW2 1772 aa31.29■■■□□ 2.6
MTCL1-204ENST00000517554 PPP1R15AO75807 674 aaPredicted RBP31.29■■■□□ 2.6
MTCL1-204ENST00000517554 ILDR1Q86SU0 546 aaPredicted RBP31.29■■■□□ 2.6
MTCL1-204ENST00000517554 ZNF326Q5BKZ1 582 aaKnown RBP31.28■■■□□ 2.6
MTCL1-204ENST00000517554 KIF1BO60333 1816 aa31.28■■■□□ 2.6
MTCL1-204ENST00000517554 NEXMIFQ5QGS0 1516 aa31.26■■■□□ 2.6
MTCL1-204ENST00000517554 CCDC144AA2RUR9 1427 aa31.25■■■□□ 2.59
MTCL1-204ENST00000517554 FBXO41Q8TF61 875 aa31.25■■■□□ 2.59
MTCL1-204ENST00000517554 CPS1P31327 1500 aa31.24■■■□□ 2.59
MTCL1-204ENST00000517554 ADAMTS13Q76LX8 1427 aa31.23■■■□□ 2.59
MTCL1-204ENST00000517554 BCANQ96GW7 911 aa31.22■■■□□ 2.59
MTCL1-204ENST00000517554 SPATA31E1Q6ZUB1 1445 aa31.2■■■□□ 2.59
MTCL1-204ENST00000517554 IQSEC2Q5JU85 1478 aa31.2■■■□□ 2.59
MTCL1-204ENST00000517554 ANKRD30BQ9BXX2 1392 aa31.2■■■□□ 2.58
MTCL1-204ENST00000517554 TRIM26Q12899 539 aaPredicted RBP31.17■■■□□ 2.58
MTCL1-204ENST00000517554 TBX22Q9Y458 520 aa31.17■■■□□ 2.58
MTCL1-204ENST00000517554 NRXN3Q9Y4C0 1643 aa31.17■■■□□ 2.58
MTCL1-204ENST00000517554 LRRC7Q96NW7 1537 aa31.16■■■□□ 2.58
MTCL1-204ENST00000517554 RPGRIP1LQ68CZ1 1315 aa31.14■■■□□ 2.57
MTCL1-204ENST00000517554 KCNA6P17658 529 aa31.13■■■□□ 2.57
MTCL1-204ENST00000517554 SETBP1Q9Y6X0 1596 aa31.13■■■□□ 2.57
MTCL1-204ENST00000517554 RGL3Q3MIN7 710 aa31.13■■■□□ 2.57
MTCL1-204ENST00000517554 NWD1Q149M9 1564 aa31.1■■■□□ 2.57
MTCL1-204ENST00000517554 DIP2AQ14689 1571 aa31.1■■■□□ 2.57
MTCL1-204ENST00000517554 PPLO60437 1756 aa31.09■■■□□ 2.57
MTCL1-204ENST00000517554 VGFO15240 615 aaPredicted RBP31.07■■■□□ 2.56
MTCL1-204ENST00000517554 CHD2O14647 1828 aaKnown RBP31.06■■■□□ 2.56
MTCL1-204ENST00000517554 PTPRUQ92729 1446 aa31.05■■■□□ 2.56
MTCL1-204ENST00000517554 METP08581 1390 aa31.03■■■□□ 2.56
MTCL1-204ENST00000517554 IFT172Q9UG01 1749 aa31.03■■■□□ 2.56
MTCL1-204ENST00000517554 ADGRF5Q8IZF2 1346 aa31.03■■■□□ 2.56
MTCL1-204ENST00000517554 XIRP1Q702N8 1843 aaKnown RBP31.03■■■□□ 2.56
MTCL1-204ENST00000517554 PIK3R4Q99570 1358 aa31.02■■■□□ 2.56
MTCL1-204ENST00000517554 RBM33Q96EV2 1170 aaKnown RBP31.02■■■□□ 2.56
MTCL1-204ENST00000517554 NKTRP30414 1462 aaKnown RBP31.01■■■□□ 2.56
MTCL1-204ENST00000517554 TMEM94Q12767 1356 aa31■■■□□ 2.55
MTCL1-204ENST00000517554 UBAP1LF5GYI3 381 aa31■■■□□ 2.55
MTCL1-204ENST00000517554 ALKQ9UM73 1620 aa30.99■■■□□ 2.55
MTCL1-204ENST00000517554 PROSER2Q86WR7 435 aaPredicted RBP30.99■■■□□ 2.55
MTCL1-204ENST00000517554 SETD1AO15047 1707 aaKnown RBP30.97■■■□□ 2.55
MTCL1-204ENST00000517554 AMOTL2Q9Y2J4 779 aa30.96■■■□□ 2.55
MTCL1-204ENST00000517554 XRN1Q8IZH2 1706 aaKnown RBP30.92■■■□□ 2.54
MTCL1-204ENST00000517554 PIK3C2GO75747 1445 aa30.91■■■□□ 2.54
MTCL1-204ENST00000517554 DHX57Q6P158 1386 aaKnown RBP30.9■■■□□ 2.54
MTCL1-204ENST00000517554 NRXN1Q9ULB1 1477 aa30.89■■■□□ 2.54
MTCL1-204ENST00000517554 TOM1O60784 492 aa30.88■■■□□ 2.53
MTCL1-204ENST00000517554 MYOM2P54296 1465 aa30.88■■■□□ 2.53
MTCL1-204ENST00000517554 PIP4K2BP78356 416 aa30.83■■■□□ 2.53
MTCL1-204ENST00000517554 ASXL1Q8IXJ9 1541 aa30.83■■■□□ 2.53
MTCL1-204ENST00000517554 DCAF11Q8TEB1 546 aa30.82■■■□□ 2.52
MTCL1-204ENST00000517554 NCOA3Q9Y6Q9 1424 aa30.81■■■□□ 2.52
MTCL1-204ENST00000517554 SIN3AQ96ST3 1273 aa30.8■■■□□ 2.52
MTCL1-204ENST00000517554 C14orf93Q9H972 538 aaKnown RBP30.79■■■□□ 2.52
MTCL1-204ENST00000517554 KDM2AQ9Y2K7 1162 aa30.79■■■□□ 2.52
MTCL1-204ENST00000517554 CFAP70Q5T0N1 1121 aa30.79■■■□□ 2.52
MTCL1-204ENST00000517554 TMEM132EQ6IEE7 984 aa30.79■■■□□ 2.52
MTCL1-204ENST00000517554 ROBO2Q9HCK4 1378 aa30.78■■■□□ 2.52
MTCL1-204ENST00000517554 PRAG1Q86YV5 1406 aa30.78■■■□□ 2.52
MTCL1-204ENST00000517554 SCAF1Q9H7N4 1312 aaKnown RBP30.77■■■□□ 2.52
MTCL1-204ENST00000517554 MSH6P52701 1360 aa30.77■■■□□ 2.52
MTCL1-204ENST00000517554 PTCH1Q13635 1447 aa30.75■■■□□ 2.51
MTCL1-204ENST00000517554 PCGF6Q9BYE7 350 aa30.73■■■□□ 2.51
MTCL1-204ENST00000517554 C14orf37Q86TY3 774 aa30.72■■■□□ 2.51
MTCL1-204ENST00000517554 C19orf44Q9H6X5 657 aa30.72■■■□□ 2.51
MTCL1-204ENST00000517554 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.71■■■□□ 2.51
MTCL1-204ENST00000517554 LRPPRCP42704 1394 aaKnown RBP30.71■■■□□ 2.51
MTCL1-204ENST00000517554 STAC3Q96MF2 364 aa30.7■■■□□ 2.5
MTCL1-204ENST00000517554 STK26Q9P289 416 aa30.7■■■□□ 2.5
MTCL1-204ENST00000517554 TECPR2O15040 1411 aa30.69■■■□□ 2.5
MTCL1-204ENST00000517554 YTHDC2Q9H6S0 1430 aaKnown RBP30.68■■■□□ 2.5
MTCL1-204ENST00000517554 ABCC11Q96J66 1382 aa30.68■■■□□ 2.5
MTCL1-204ENST00000517554 LAMC1P11047 1609 aa30.68■■■□□ 2.5
MTCL1-204ENST00000517554 NEUROD1Q13562 356 aa30.67■■■□□ 2.5
MTCL1-204ENST00000517554 HSPA1LP34931 641 aa30.66■■■□□ 2.5
MTCL1-204ENST00000517554 ADGRL3Q9HAR2 1447 aa30.66■■■□□ 2.5
MTCL1-204ENST00000517554 SLAIN2Q9P270 581 aa30.66■■■□□ 2.5
MTCL1-204ENST00000517554 ADGRB1O14514 1584 aa30.66■■■□□ 2.5
MTCL1-204ENST00000517554 NALCNQ8IZF0 1738 aa30.65■■■□□ 2.5
MTCL1-204ENST00000517554 L3MBTL2Q969R5 705 aa30.65■■■□□ 2.5
MTCL1-204ENST00000517554 FAM135BQ49AJ0 1406 aa30.65■■■□□ 2.5
MTCL1-204ENST00000517554 WAPLQ7Z5K2 1190 aa30.62■■■□□ 2.49
MTCL1-204ENST00000517554 CADPS2Q86UW7 1296 aa30.62■■■□□ 2.49
MTCL1-204ENST00000517554 PLEKHH1Q9ULM0 1364 aa30.62■■■□□ 2.49
MTCL1-204ENST00000517554 KNDC1Q76NI1 1749 aa30.62■■■□□ 2.49
MTCL1-204ENST00000517554 DCCP43146 1447 aa30.62■■■□□ 2.49
MTCL1-204ENST00000517554 ATF3P18847 181 aa30.61■■■□□ 2.49
MTCL1-204ENST00000517554 ROBO1Q9Y6N7 1651 aa30.59■■■□□ 2.49
MTCL1-204ENST00000517554 MST1RQ04912 1400 aa30.56■■■□□ 2.48
MTCL1-204ENST00000517554 SIRT1Q96EB6 747 aa30.55■■■□□ 2.48
MTCL1-204ENST00000517554 NBPF1Q3BBV0 1214 aa30.51■■■□□ 2.47
MTCL1-204ENST00000517554 DLC1Q96QB1 1528 aa30.5■■■□□ 2.47
MTCL1-204ENST00000517554 TRAK1Q9UPV9 953 aa30.5■■■□□ 2.47
MTCL1-204ENST00000517554 BRINP3Q76B58 766 aa30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms