RNA–Protein interactions for RNA: ENST00000516882.1

SCARNA18.2-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 84 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.2-201ENST00000516882 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.64□□□□□ -0.71
SCARNA18.2-201ENST00000516882 UBAP1LF5GYI3 381 aa10.63□□□□□ -0.71
SCARNA18.2-201ENST00000516882 SLC4A1APQ9BWU0 796 aaKnown RBP10.63□□□□□ -0.71
SCARNA18.2-201ENST00000516882 RIMS2Q9UQ26 1411 aa10.62□□□□□ -0.71
SCARNA18.2-201ENST00000516882 CHD2O14647 1828 aaKnown RBP10.62□□□□□ -0.71
SCARNA18.2-201ENST00000516882 TOM1O60784 492 aa10.61□□□□□ -0.71
SCARNA18.2-201ENST00000516882 ZNF326Q5BKZ1 582 aaKnown RBP10.61□□□□□ -0.71
SCARNA18.2-201ENST00000516882 TRPM2O94759 1503 aa10.61□□□□□ -0.71
SCARNA18.2-201ENST00000516882 CLTCL1P53675 1640 aa10.6□□□□□ -0.71
SCARNA18.2-201ENST00000516882 XIRP1Q702N8 1843 aaKnown RBP10.6□□□□□ -0.71
SCARNA18.2-201ENST00000516882 SCAF1Q9H7N4 1312 aaKnown RBP10.59□□□□□ -0.71
SCARNA18.2-201ENST00000516882 ZFYVE9O95405 1425 aa10.59□□□□□ -0.71
SCARNA18.2-201ENST00000516882 SLC26A8Q96RN1 970 aa10.59□□□□□ -0.71
SCARNA18.2-201ENST00000516882 PLEKHG1Q9ULL1 1385 aa10.59□□□□□ -0.71
SCARNA18.2-201ENST00000516882 SETD5Q9C0A6 1442 aa10.58□□□□□ -0.72
SCARNA18.2-201ENST00000516882 DIP2AQ14689 1571 aa10.58□□□□□ -0.72
SCARNA18.2-201ENST00000516882 NUTM2DQ5VT03 806 aaPredicted RBP10.58□□□□□ -0.72
SCARNA18.2-201ENST00000516882 SENP3Q9H4L4 574 aaPredicted RBP10.58□□□□□ -0.72
SCARNA18.2-201ENST00000516882 LRRC7Q96NW7 1537 aa10.58□□□□□ -0.72
SCARNA18.2-201ENST00000516882 KCNA6P17658 529 aa10.57□□□□□ -0.72
SCARNA18.2-201ENST00000516882 PIP4K2BP78356 416 aa10.56□□□□□ -0.72
SCARNA18.2-201ENST00000516882 PROSER2Q86WR7 435 aaPredicted RBP10.56□□□□□ -0.72
SCARNA18.2-201ENST00000516882 NKTRP30414 1462 aaKnown RBP10.55□□□□□ -0.72
SCARNA18.2-201ENST00000516882 PPLO60437 1756 aa10.55□□□□□ -0.72
SCARNA18.2-201ENST00000516882 MPHOSPH9Q99550 1183 aa10.55□□□□□ -0.72
SCARNA18.2-201ENST00000516882 TBX22Q9Y458 520 aa10.55□□□□□ -0.72
SCARNA18.2-201ENST00000516882 NWD1Q149M9 1564 aa10.55□□□□□ -0.72
SCARNA18.2-201ENST00000516882 CCDC144AA2RUR9 1427 aa10.54□□□□□ -0.72
SCARNA18.2-201ENST00000516882 VGFO15240 615 aaPredicted RBP10.53□□□□□ -0.72
SCARNA18.2-201ENST00000516882 NEXMIFQ5QGS0 1516 aa10.53□□□□□ -0.72
SCARNA18.2-201ENST00000516882 PIK3R4Q99570 1358 aa10.52□□□□□ -0.72
SCARNA18.2-201ENST00000516882 RAB3GAP2Q9H2M9 1393 aa10.52□□□□□ -0.72
SCARNA18.2-201ENST00000516882 SETBP1Q9Y6X0 1596 aa10.52□□□□□ -0.72
SCARNA18.2-201ENST00000516882 FOXD1Q16676 465 aa10.52□□□□□ -0.73
SCARNA18.2-201ENST00000516882 RPGRIP1LQ68CZ1 1315 aa10.52□□□□□ -0.73
SCARNA18.2-201ENST00000516882 TMEM94Q12767 1356 aa10.52□□□□□ -0.73
SCARNA18.2-201ENST00000516882 NRXN3Q9Y4C0 1643 aa10.51□□□□□ -0.73
SCARNA18.2-201ENST00000516882 ADAMTS13Q76LX8 1427 aa10.51□□□□□ -0.73
SCARNA18.2-201ENST00000516882 C14orf37Q86TY3 774 aa10.51□□□□□ -0.73
SCARNA18.2-201ENST00000516882 MSH6P52701 1360 aa10.51□□□□□ -0.73
SCARNA18.2-201ENST00000516882 IFT172Q9UG01 1749 aa10.5□□□□□ -0.73
SCARNA18.2-201ENST00000516882 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.48□□□□□ -0.73
SCARNA18.2-201ENST00000516882 HRCP23327 699 aa10.48□□□□□ -0.73
SCARNA18.2-201ENST00000516882 RGL3Q3MIN7 710 aa10.48□□□□□ -0.73
SCARNA18.2-201ENST00000516882 RBM33Q96EV2 1170 aaKnown RBP10.48□□□□□ -0.73
SCARNA18.2-201ENST00000516882 AMOTL2Q9Y2J4 779 aa10.48□□□□□ -0.73
SCARNA18.2-201ENST00000516882 NCOA3Q9Y6Q9 1424 aa10.48□□□□□ -0.73
SCARNA18.2-201ENST00000516882 ALKQ9UM73 1620 aa10.47□□□□□ -0.73
SCARNA18.2-201ENST00000516882 XRN1Q8IZH2 1706 aaKnown RBP10.47□□□□□ -0.73
SCARNA18.2-201ENST00000516882 HSPA1LP34931 641 aa10.47□□□□□ -0.73
SCARNA18.2-201ENST00000516882 ROBO1Q9Y6N7 1651 aa10.47□□□□□ -0.73
SCARNA18.2-201ENST00000516882 SETD1AO15047 1707 aaKnown RBP10.47□□□□□ -0.73
SCARNA18.2-201ENST00000516882 ATF3P18847 181 aa10.46□□□□□ -0.73
SCARNA18.2-201ENST00000516882 ANKRD30BQ9BXX2 1392 aa10.46□□□□□ -0.74
SCARNA18.2-201ENST00000516882 CADPS2Q86UW7 1296 aa10.45□□□□□ -0.74
SCARNA18.2-201ENST00000516882 C19orf44Q9H6X5 657 aa10.45□□□□□ -0.74
SCARNA18.2-201ENST00000516882 FAM135BQ49AJ0 1406 aa10.44□□□□□ -0.74
SCARNA18.2-201ENST00000516882 METP08581 1390 aa10.44□□□□□ -0.74
SCARNA18.2-201ENST00000516882 DISP3Q9P2K9 1392 aa10.44□□□□□ -0.74
SCARNA18.2-201ENST00000516882 PHLPP1O60346 1717 aa10.44□□□□□ -0.74
SCARNA18.2-201ENST00000516882 SPATA31E1Q6ZUB1 1445 aa10.43□□□□□ -0.74
SCARNA18.2-201ENST00000516882 PTPRUQ92729 1446 aa10.43□□□□□ -0.74
SCARNA18.2-201ENST00000516882 SLAIN2Q9P270 581 aa10.43□□□□□ -0.74
SCARNA18.2-201ENST00000516882 LAMC1P11047 1609 aa10.42□□□□□ -0.74
SCARNA18.2-201ENST00000516882 NALCNQ8IZF0 1738 aa10.41□□□□□ -0.74
SCARNA18.2-201ENST00000516882 DCCP43146 1447 aa10.41□□□□□ -0.74
SCARNA18.2-201ENST00000516882 ADGRF5Q8IZF2 1346 aa10.4□□□□□ -0.74
SCARNA18.2-201ENST00000516882 KNDC1Q76NI1 1749 aa10.4□□□□□ -0.74
SCARNA18.2-201ENST00000516882 PTCH1Q13635 1447 aa10.4□□□□□ -0.75
SCARNA18.2-201ENST00000516882 ADGRL3Q9HAR2 1447 aa10.39□□□□□ -0.75
SCARNA18.2-201ENST00000516882 MYOM2P54296 1465 aa10.38□□□□□ -0.75
SCARNA18.2-201ENST00000516882 PIK3C2GO75747 1445 aa10.38□□□□□ -0.75
SCARNA18.2-201ENST00000516882 MED1Q15648 1581 aaPredicted RBP10.38□□□□□ -0.75
SCARNA18.2-201ENST00000516882 STAC3Q96MF2 364 aa10.37□□□□□ -0.75
SCARNA18.2-201ENST00000516882 PHF23Q9BUL5 403 aaPredicted RBP10.37□□□□□ -0.75
SCARNA18.2-201ENST00000516882 STK26Q9P289 416 aa10.37□□□□□ -0.75
SCARNA18.2-201ENST00000516882 PRAG1Q86YV5 1406 aa10.36□□□□□ -0.75
SCARNA18.2-201ENST00000516882 DCAF11Q8TEB1 546 aa10.36□□□□□ -0.75
SCARNA18.2-201ENST00000516882 KDM2AQ9Y2K7 1162 aa10.36□□□□□ -0.75
SCARNA18.2-201ENST00000516882 DHX57Q6P158 1386 aaKnown RBP10.36□□□□□ -0.75
SCARNA18.2-201ENST00000516882 ROBO2Q9HCK4 1378 aa10.36□□□□□ -0.75
SCARNA18.2-201ENST00000516882 TMEM132EQ6IEE7 984 aa10.35□□□□□ -0.75
SCARNA18.2-201ENST00000516882 C14orf93Q9H972 538 aaKnown RBP10.35□□□□□ -0.75
SCARNA18.2-201ENST00000516882 LRPPRCP42704 1394 aaKnown RBP10.35□□□□□ -0.75
SCARNA18.2-201ENST00000516882 NRXN1Q9ULB1 1477 aa10.35□□□□□ -0.75
SCARNA18.2-201ENST00000516882 MST1RQ04912 1400 aa10.34□□□□□ -0.75
SCARNA18.2-201ENST00000516882 YTHDC2Q9H6S0 1430 aaKnown RBP10.34□□□□□ -0.75
SCARNA18.2-201ENST00000516882 NHSL1Q5SYE7 1610 aa10.34□□□□□ -0.75
SCARNA18.2-201ENST00000516882 AHDC1Q5TGY3 1603 aaPredicted RBP10.34□□□□□ -0.75
SCARNA18.2-201ENST00000516882 TECPR2O15040 1411 aa10.33□□□□□ -0.76
SCARNA18.2-201ENST00000516882 COL16A1Q07092 1604 aaPredicted RBP10.33□□□□□ -0.76
SCARNA18.2-201ENST00000516882 CFAP70Q5T0N1 1121 aa10.33□□□□□ -0.76
SCARNA18.2-201ENST00000516882 BRINP3Q76B58 766 aa10.33□□□□□ -0.76
SCARNA18.2-201ENST00000516882 ABCC11Q96J66 1382 aa10.33□□□□□ -0.76
SCARNA18.2-201ENST00000516882 JCADQ9P266 1359 aa10.33□□□□□ -0.76
SCARNA18.2-201ENST00000516882 RGPD8O14715 1765 aaPredicted RBP10.33□□□□□ -0.76
SCARNA18.2-201ENST00000516882 ASXL1Q8IXJ9 1541 aa10.33□□□□□ -0.76
SCARNA18.2-201ENST00000516882 SHPRHQ149N8 1683 aa10.32□□□□□ -0.76
SCARNA18.2-201ENST00000516882 CDC42BPGQ6DT37 1551 aa10.32□□□□□ -0.76
SCARNA18.2-201ENST00000516882 TRIM26Q12899 539 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms