RNA–Protein interactions for RNA: ENST00000515008.1

SIL1-215, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 843 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-215ENST00000515008 ALKQ9UM73 1620 aa26.74■■□□□ 1.87
SIL1-215ENST00000515008 NWD1Q149M9 1564 aa26.72■■□□□ 1.87
SIL1-215ENST00000515008 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.72■■□□□ 1.87
SIL1-215ENST00000515008 SCAF1Q9H7N4 1312 aaKnown RBP26.7■■□□□ 1.87
SIL1-215ENST00000515008 XIRP1Q702N8 1843 aaKnown RBP26.7■■□□□ 1.87
SIL1-215ENST00000515008 NKTRP30414 1462 aaKnown RBP26.7■■□□□ 1.87
SIL1-215ENST00000515008 PPP1R15AO75807 674 aaPredicted RBP26.7■■□□□ 1.86
SIL1-215ENST00000515008 CHGAP10645 457 aaKnown RBP26.7■■□□□ 1.86
SIL1-215ENST00000515008 KCNA6P17658 529 aa26.7■■□□□ 1.86
SIL1-215ENST00000515008 SLC26A8Q96RN1 970 aa26.7■■□□□ 1.86
SIL1-215ENST00000515008 PIP4K2BP78356 416 aa26.69■■□□□ 1.86
SIL1-215ENST00000515008 BCANQ96GW7 911 aa26.66■■□□□ 1.86
SIL1-215ENST00000515008 DIP2AQ14689 1571 aa26.66■■□□□ 1.86
SIL1-215ENST00000515008 TRPM2O94759 1503 aa26.65■■□□□ 1.86
SIL1-215ENST00000515008 DISP3Q9P2K9 1392 aa26.63■■□□□ 1.85
SIL1-215ENST00000515008 CHD2O14647 1828 aaKnown RBP26.62■■□□□ 1.85
SIL1-215ENST00000515008 TMEM94Q12767 1356 aa26.62■■□□□ 1.85
SIL1-215ENST00000515008 HSPA1LP34931 641 aa26.61■■□□□ 1.85
SIL1-215ENST00000515008 TBX22Q9Y458 520 aa26.61■■□□□ 1.85
SIL1-215ENST00000515008 ADAMTS13Q76LX8 1427 aa26.59■■□□□ 1.85
SIL1-215ENST00000515008 CLTCL1P53675 1640 aa26.59■■□□□ 1.85
SIL1-215ENST00000515008 PROSER2Q86WR7 435 aaPredicted RBP26.58■■□□□ 1.85
SIL1-215ENST00000515008 PIK3R4Q99570 1358 aa26.58■■□□□ 1.84
SIL1-215ENST00000515008 TRIM52Q96A61 297 aa26.56■■□□□ 1.84
SIL1-215ENST00000515008 KIF1BO60333 1816 aa26.55■■□□□ 1.84
SIL1-215ENST00000515008 NUTM2DQ5VT03 806 aaPredicted RBP26.53■■□□□ 1.84
SIL1-215ENST00000515008 SETBP1Q9Y6X0 1596 aa26.53■■□□□ 1.84
SIL1-215ENST00000515008 SENP3Q9H4L4 574 aaPredicted RBP26.52■■□□□ 1.84
SIL1-215ENST00000515008 NCOA3Q9Y6Q9 1424 aa26.51■■□□□ 1.83
SIL1-215ENST00000515008 SLC4A1APQ9BWU0 796 aaKnown RBP26.51■■□□□ 1.83
SIL1-215ENST00000515008 MSH6P52701 1360 aa26.5■■□□□ 1.83
SIL1-215ENST00000515008 ZNF326Q5BKZ1 582 aaKnown RBP26.5■■□□□ 1.83
SIL1-215ENST00000515008 NRXN3Q9Y4C0 1643 aa26.5■■□□□ 1.83
SIL1-215ENST00000515008 NEXMIFQ5QGS0 1516 aa26.49■■□□□ 1.83
SIL1-215ENST00000515008 FAM135BQ49AJ0 1406 aa26.49■■□□□ 1.83
SIL1-215ENST00000515008 MED1Q15648 1581 aaPredicted RBP26.46■■□□□ 1.83
SIL1-215ENST00000515008 ACIN1Q9UKV3 1341 aaKnown RBP26.45■■□□□ 1.83
SIL1-215ENST00000515008 RBM33Q96EV2 1170 aaKnown RBP26.44■■□□□ 1.82
SIL1-215ENST00000515008 XRN1Q8IZH2 1706 aaKnown RBP26.42■■□□□ 1.82
SIL1-215ENST00000515008 ROBO1Q9Y6N7 1651 aa26.42■■□□□ 1.82
SIL1-215ENST00000515008 PTPRUQ92729 1446 aa26.4■■□□□ 1.82
SIL1-215ENST00000515008 RPGRIP1LQ68CZ1 1315 aa26.39■■□□□ 1.81
SIL1-215ENST00000515008 AMOTL2Q9Y2J4 779 aa26.38■■□□□ 1.81
SIL1-215ENST00000515008 ILDR2Q71H61 639 aa26.37■■□□□ 1.81
SIL1-215ENST00000515008 SETD5Q9C0A6 1442 aa26.36■■□□□ 1.81
SIL1-215ENST00000515008 CCDC144AA2RUR9 1427 aa26.35■■□□□ 1.81
SIL1-215ENST00000515008 VGFO15240 615 aaPredicted RBP26.35■■□□□ 1.81
SIL1-215ENST00000515008 C14orf37Q86TY3 774 aa26.35■■□□□ 1.81
SIL1-215ENST00000515008 SLAIN2Q9P270 581 aa26.35■■□□□ 1.81
SIL1-215ENST00000515008 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.35■■□□□ 1.81
SIL1-215ENST00000515008 PPLO60437 1756 aa26.35■■□□□ 1.81
SIL1-215ENST00000515008 MPHOSPH9Q99550 1183 aa26.34■■□□□ 1.81
SIL1-215ENST00000515008 METP08581 1390 aa26.33■■□□□ 1.81
SIL1-215ENST00000515008 C19orf44Q9H6X5 657 aa26.33■■□□□ 1.81
SIL1-215ENST00000515008 DCCP43146 1447 aa26.32■■□□□ 1.8
SIL1-215ENST00000515008 CADPS2Q86UW7 1296 aa26.32■■□□□ 1.8
SIL1-215ENST00000515008 FOXD1Q16676 465 aa26.31■■□□□ 1.8
SIL1-215ENST00000515008 SETD1AO15047 1707 aaKnown RBP26.31■■□□□ 1.8
SIL1-215ENST00000515008 ATF3P18847 181 aa26.28■■□□□ 1.8
SIL1-215ENST00000515008 PHLPP1O60346 1717 aa26.26■■□□□ 1.79
SIL1-215ENST00000515008 SPATA31E1Q6ZUB1 1445 aa26.26■■□□□ 1.79
SIL1-215ENST00000515008 PRAG1Q86YV5 1406 aa26.26■■□□□ 1.79
SIL1-215ENST00000515008 PTCH1Q13635 1447 aa26.25■■□□□ 1.79
SIL1-215ENST00000515008 RAB3GAP2Q9H2M9 1393 aa26.24■■□□□ 1.79
SIL1-215ENST00000515008 ADGRL3Q9HAR2 1447 aa26.23■■□□□ 1.79
SIL1-215ENST00000515008 IFT172Q9UG01 1749 aa26.23■■□□□ 1.79
SIL1-215ENST00000515008 SOCS7O14512 581 aa26.23■■□□□ 1.79
SIL1-215ENST00000515008 PHF23Q9BUL5 403 aaPredicted RBP26.23■■□□□ 1.79
SIL1-215ENST00000515008 ANKRD30BQ9BXX2 1392 aa26.22■■□□□ 1.79
SIL1-215ENST00000515008 AHDC1Q5TGY3 1603 aaPredicted RBP26.21■■□□□ 1.79
SIL1-215ENST00000515008 COL16A1Q07092 1604 aaPredicted RBP26.21■■□□□ 1.79
SIL1-215ENST00000515008 NALCNQ8IZF0 1738 aa26.19■■□□□ 1.78
SIL1-215ENST00000515008 MST1RQ04912 1400 aa26.17■■□□□ 1.78
SIL1-215ENST00000515008 JCADQ9P266 1359 aa26.17■■□□□ 1.78
SIL1-215ENST00000515008 RGL3Q3MIN7 710 aa26.15■■□□□ 1.78
SIL1-215ENST00000515008 ROBO2Q9HCK4 1378 aa26.14■■□□□ 1.78
SIL1-215ENST00000515008 ASXL1Q8IXJ9 1541 aa26.14■■□□□ 1.77
SIL1-215ENST00000515008 ADGRF5Q8IZF2 1346 aa26.14■■□□□ 1.77
SIL1-215ENST00000515008 BRINP3Q76B58 766 aa26.13■■□□□ 1.77
SIL1-215ENST00000515008 HRCP23327 699 aa26.12■■□□□ 1.77
SIL1-215ENST00000515008 PIK3C2GO75747 1445 aa26.12■■□□□ 1.77
SIL1-215ENST00000515008 NHSL1Q5SYE7 1610 aa26.09■■□□□ 1.77
SIL1-215ENST00000515008 MYOM2P54296 1465 aa26.09■■□□□ 1.77
SIL1-215ENST00000515008 SHPRHQ149N8 1683 aa26.09■■□□□ 1.77
SIL1-215ENST00000515008 TECPR2O15040 1411 aa26.08■■□□□ 1.77
SIL1-215ENST00000515008 KNDC1Q76NI1 1749 aa26.07■■□□□ 1.76
SIL1-215ENST00000515008 NRXN1Q9ULB1 1477 aa26.06■■□□□ 1.76
SIL1-215ENST00000515008 LRPPRCP42704 1394 aaKnown RBP26.06■■□□□ 1.76
SIL1-215ENST00000515008 LAMC1P11047 1609 aa26.05■■□□□ 1.76
SIL1-215ENST00000515008 SPATA31A6Q5VVP1 1343 aa26.05■■□□□ 1.76
SIL1-215ENST00000515008 C1orf167Q5SNV9 1468 aa26.04■■□□□ 1.76
SIL1-215ENST00000515008 CDC42BPGQ6DT37 1551 aa26.03■■□□□ 1.76
SIL1-215ENST00000515008 RGS17Q9UGC6 210 aaPredicted RBP26.02■■□□□ 1.76
SIL1-215ENST00000515008 ABCC11Q96J66 1382 aa26.02■■□□□ 1.76
SIL1-215ENST00000515008 YTHDC2Q9H6S0 1430 aaKnown RBP25.98■■□□□ 1.75
SIL1-215ENST00000515008 LRP6O75581 1613 aa25.97■■□□□ 1.75
SIL1-215ENST00000515008 C14orf93Q9H972 538 aaKnown RBP25.97■■□□□ 1.75
SIL1-215ENST00000515008 STK26Q9P289 416 aa25.95■■□□□ 1.74
SIL1-215ENST00000515008 TMEM132EQ6IEE7 984 aa25.94■■□□□ 1.74
SIL1-215ENST00000515008 LRRC59Q96AG4 307 aaKnown RBP25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms