RNA–Protein interactions for RNA: ENST00000513222.1

CCHCR1-230, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-230ENST00000513222 RIMS2Q9UQ26 1411 aa29.45■■■□□ 2.31
CCHCR1-230ENST00000513222 TOM1O60784 492 aa29.45■■■□□ 2.31
CCHCR1-230ENST00000513222 NWD1Q149M9 1564 aa29.43■■■□□ 2.3
CCHCR1-230ENST00000513222 CHD2O14647 1828 aaKnown RBP29.41■■■□□ 2.3
CCHCR1-230ENST00000513222 KCNA6P17658 529 aa29.41■■■□□ 2.3
CCHCR1-230ENST00000513222 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.41■■■□□ 2.3
CCHCR1-230ENST00000513222 TRPM2O94759 1503 aa29.38■■■□□ 2.29
CCHCR1-230ENST00000513222 SLC26A8Q96RN1 970 aa29.37■■■□□ 2.29
CCHCR1-230ENST00000513222 NKTRP30414 1462 aaKnown RBP29.36■■■□□ 2.29
CCHCR1-230ENST00000513222 TBX22Q9Y458 520 aa29.36■■■□□ 2.29
CCHCR1-230ENST00000513222 DIP2AQ14689 1571 aa29.34■■■□□ 2.29
CCHCR1-230ENST00000513222 ADAMTS13Q76LX8 1427 aa29.33■■■□□ 2.29
CCHCR1-230ENST00000513222 CLTCL1P53675 1640 aa29.33■■■□□ 2.29
CCHCR1-230ENST00000513222 PIK3R4Q99570 1358 aa29.3■■■□□ 2.28
CCHCR1-230ENST00000513222 KIF1BO60333 1816 aa29.3■■■□□ 2.28
CCHCR1-230ENST00000513222 CHGAP10645 457 aaKnown RBP29.29■■■□□ 2.28
CCHCR1-230ENST00000513222 PPP1R15AO75807 674 aaPredicted RBP29.28■■■□□ 2.28
CCHCR1-230ENST00000513222 TMEM94Q12767 1356 aa29.26■■■□□ 2.28
CCHCR1-230ENST00000513222 SETBP1Q9Y6X0 1596 aa29.26■■■□□ 2.27
CCHCR1-230ENST00000513222 ACIN1Q9UKV3 1341 aaKnown RBP29.25■■■□□ 2.27
CCHCR1-230ENST00000513222 NRXN3Q9Y4C0 1643 aa29.25■■■□□ 2.27
CCHCR1-230ENST00000513222 PIP4K2BP78356 416 aa29.24■■■□□ 2.27
CCHCR1-230ENST00000513222 NCOA3Q9Y6Q9 1424 aa29.24■■■□□ 2.27
CCHCR1-230ENST00000513222 NEXMIFQ5QGS0 1516 aa29.23■■■□□ 2.27
CCHCR1-230ENST00000513222 HSPA1LP34931 641 aa29.22■■■□□ 2.27
CCHCR1-230ENST00000513222 PROSER2Q86WR7 435 aaPredicted RBP29.22■■■□□ 2.27
CCHCR1-230ENST00000513222 TRIM52Q96A61 297 aa29.22■■■□□ 2.27
CCHCR1-230ENST00000513222 SLC4A1APQ9BWU0 796 aaKnown RBP29.22■■■□□ 2.27
CCHCR1-230ENST00000513222 BCANQ96GW7 911 aa29.21■■■□□ 2.27
CCHCR1-230ENST00000513222 FAM135BQ49AJ0 1406 aa29.19■■■□□ 2.26
CCHCR1-230ENST00000513222 NUTM2DQ5VT03 806 aaPredicted RBP29.17■■■□□ 2.26
CCHCR1-230ENST00000513222 SCAF1Q9H7N4 1312 aaKnown RBP29.15■■■□□ 2.26
CCHCR1-230ENST00000513222 XRN1Q8IZH2 1706 aaKnown RBP29.13■■■□□ 2.25
CCHCR1-230ENST00000513222 RPGRIP1LQ68CZ1 1315 aa29.12■■■□□ 2.25
CCHCR1-230ENST00000513222 PTPRUQ92729 1446 aa29.11■■■□□ 2.25
CCHCR1-230ENST00000513222 SETD5Q9C0A6 1442 aa29.11■■■□□ 2.25
CCHCR1-230ENST00000513222 ZNF326Q5BKZ1 582 aaKnown RBP29.11■■■□□ 2.25
CCHCR1-230ENST00000513222 MPHOSPH9Q99550 1183 aa29.11■■■□□ 2.25
CCHCR1-230ENST00000513222 DISP3Q9P2K9 1392 aa29.11■■■□□ 2.25
CCHCR1-230ENST00000513222 PPLO60437 1756 aa29.1■■■□□ 2.25
CCHCR1-230ENST00000513222 MSH6P52701 1360 aa29.1■■■□□ 2.25
CCHCR1-230ENST00000513222 SETD1AO15047 1707 aaKnown RBP29.08■■■□□ 2.25
CCHCR1-230ENST00000513222 RBM33Q96EV2 1170 aaKnown RBP29.07■■■□□ 2.24
CCHCR1-230ENST00000513222 SENP3Q9H4L4 574 aaPredicted RBP29.06■■■□□ 2.24
CCHCR1-230ENST00000513222 AMOTL2Q9Y2J4 779 aa29.06■■■□□ 2.24
CCHCR1-230ENST00000513222 ROBO1Q9Y6N7 1651 aa29.05■■■□□ 2.24
CCHCR1-230ENST00000513222 VGFO15240 615 aaPredicted RBP29.05■■■□□ 2.24
CCHCR1-230ENST00000513222 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.05■■■□□ 2.24
CCHCR1-230ENST00000513222 METP08581 1390 aa29.04■■■□□ 2.24
CCHCR1-230ENST00000513222 SPATA31E1Q6ZUB1 1445 aa29.03■■■□□ 2.24
CCHCR1-230ENST00000513222 C19orf44Q9H6X5 657 aa29.02■■■□□ 2.24
CCHCR1-230ENST00000513222 PRAG1Q86YV5 1406 aa29.02■■■□□ 2.24
CCHCR1-230ENST00000513222 FOXD1Q16676 465 aa29.01■■■□□ 2.23
CCHCR1-230ENST00000513222 SLAIN2Q9P270 581 aa29.01■■■□□ 2.23
CCHCR1-230ENST00000513222 CCDC144AA2RUR9 1427 aa29.01■■■□□ 2.23
CCHCR1-230ENST00000513222 MED1Q15648 1581 aaPredicted RBP29.01■■■□□ 2.23
CCHCR1-230ENST00000513222 IFT172Q9UG01 1749 aa29■■■□□ 2.23
CCHCR1-230ENST00000513222 HRCP23327 699 aa28.99■■■□□ 2.23
CCHCR1-230ENST00000513222 DCCP43146 1447 aa28.98■■■□□ 2.23
CCHCR1-230ENST00000513222 RAB3GAP2Q9H2M9 1393 aa28.98■■■□□ 2.23
CCHCR1-230ENST00000513222 CADPS2Q86UW7 1296 aa28.95■■■□□ 2.22
CCHCR1-230ENST00000513222 ILDR2Q71H61 639 aa28.94■■■□□ 2.22
CCHCR1-230ENST00000513222 ANKRD30BQ9BXX2 1392 aa28.91■■■□□ 2.22
CCHCR1-230ENST00000513222 PTCH1Q13635 1447 aa28.9■■■□□ 2.22
CCHCR1-230ENST00000513222 ATF3P18847 181 aa28.87■■■□□ 2.21
CCHCR1-230ENST00000513222 PHLPP1O60346 1717 aa28.86■■■□□ 2.21
CCHCR1-230ENST00000513222 ADGRL3Q9HAR2 1447 aa28.86■■■□□ 2.21
CCHCR1-230ENST00000513222 C14orf37Q86TY3 774 aa28.85■■■□□ 2.21
CCHCR1-230ENST00000513222 NALCNQ8IZF0 1738 aa28.85■■■□□ 2.21
CCHCR1-230ENST00000513222 AHDC1Q5TGY3 1603 aaPredicted RBP28.84■■■□□ 2.21
CCHCR1-230ENST00000513222 ADGRF5Q8IZF2 1346 aa28.84■■■□□ 2.21
CCHCR1-230ENST00000513222 COL16A1Q07092 1604 aaPredicted RBP28.83■■■□□ 2.21
CCHCR1-230ENST00000513222 NRXN1Q9ULB1 1477 aa28.81■■■□□ 2.2
CCHCR1-230ENST00000513222 PIK3C2GO75747 1445 aa28.81■■■□□ 2.2
CCHCR1-230ENST00000513222 MST1RQ04912 1400 aa28.8■■■□□ 2.2
CCHCR1-230ENST00000513222 ROBO2Q9HCK4 1378 aa28.8■■■□□ 2.2
CCHCR1-230ENST00000513222 RGL3Q3MIN7 710 aa28.79■■■□□ 2.2
CCHCR1-230ENST00000513222 TECPR2O15040 1411 aa28.78■■■□□ 2.2
CCHCR1-230ENST00000513222 MYOM2P54296 1465 aa28.77■■■□□ 2.2
CCHCR1-230ENST00000513222 BRINP3Q76B58 766 aa28.76■■■□□ 2.19
CCHCR1-230ENST00000513222 KNDC1Q76NI1 1749 aa28.75■■■□□ 2.19
CCHCR1-230ENST00000513222 NHSL1Q5SYE7 1610 aa28.74■■■□□ 2.19
CCHCR1-230ENST00000513222 SOCS7O14512 581 aa28.74■■■□□ 2.19
CCHCR1-230ENST00000513222 JCADQ9P266 1359 aa28.74■■■□□ 2.19
CCHCR1-230ENST00000513222 ASXL1Q8IXJ9 1541 aa28.74■■■□□ 2.19
CCHCR1-230ENST00000513222 ABCC11Q96J66 1382 aa28.73■■■□□ 2.19
CCHCR1-230ENST00000513222 LAMC1P11047 1609 aa28.72■■■□□ 2.19
CCHCR1-230ENST00000513222 SHPRHQ149N8 1683 aa28.71■■■□□ 2.19
CCHCR1-230ENST00000513222 LRPPRCP42704 1394 aaKnown RBP28.71■■■□□ 2.19
CCHCR1-230ENST00000513222 C14orf93Q9H972 538 aaKnown RBP28.7■■■□□ 2.18
CCHCR1-230ENST00000513222 SIRT1Q96EB6 747 aa28.68■■■□□ 2.18
CCHCR1-230ENST00000513222 C1orf167Q5SNV9 1468 aa28.67■■■□□ 2.18
CCHCR1-230ENST00000513222 RGS17Q9UGC6 210 aaPredicted RBP28.67■■■□□ 2.18
CCHCR1-230ENST00000513222 STAC3Q96MF2 364 aa28.66■■■□□ 2.18
CCHCR1-230ENST00000513222 CDC42BPGQ6DT37 1551 aa28.66■■■□□ 2.18
CCHCR1-230ENST00000513222 PHF23Q9BUL5 403 aaPredicted RBP28.64■■■□□ 2.18
CCHCR1-230ENST00000513222 SPATA31A6Q5VVP1 1343 aa28.64■■■□□ 2.17
CCHCR1-230ENST00000513222 YTHDC2Q9H6S0 1430 aaKnown RBP28.63■■■□□ 2.17
CCHCR1-230ENST00000513222 TMEM132EQ6IEE7 984 aa28.6■■■□□ 2.17
CCHCR1-230ENST00000513222 ADGRB1O14514 1584 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms