RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 FOXD1Q16676 465 aa23.64■■□□□ 1.37
DDX41-214ENST00000512334 BCANQ96GW7 911 aa23.64■■□□□ 1.37
DDX41-214ENST00000512334 MPHOSPH9Q99550 1183 aa23.64■■□□□ 1.37
DDX41-214ENST00000512334 CLTCL1P53675 1640 aa23.63■■□□□ 1.37
DDX41-214ENST00000512334 ZFYVE9O95405 1425 aa23.62■■□□□ 1.37
DDX41-214ENST00000512334 SENP3Q9H4L4 574 aaPredicted RBP23.62■■□□□ 1.37
DDX41-214ENST00000512334 ZNF326Q5BKZ1 582 aaKnown RBP23.61■■□□□ 1.37
DDX41-214ENST00000512334 NUTM2DQ5VT03 806 aaPredicted RBP23.6■■□□□ 1.37
DDX41-214ENST00000512334 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.6■■□□□ 1.37
DDX41-214ENST00000512334 SLC26A8Q96RN1 970 aa23.58■■□□□ 1.37
DDX41-214ENST00000512334 KIF1BO60333 1816 aa23.58■■□□□ 1.37
DDX41-214ENST00000512334 CPS1P31327 1500 aa23.58■■□□□ 1.36
DDX41-214ENST00000512334 PLEKHG1Q9ULL1 1385 aa23.56■■□□□ 1.36
DDX41-214ENST00000512334 IQSEC2Q5JU85 1478 aa23.56■■□□□ 1.36
DDX41-214ENST00000512334 STRCP1A6NGW2 1772 aa23.52■■□□□ 1.36
DDX41-214ENST00000512334 CCDC144AA2RUR9 1427 aa23.51■■□□□ 1.35
DDX41-214ENST00000512334 HRCP23327 699 aa23.49■■□□□ 1.35
DDX41-214ENST00000512334 NEXMIFQ5QGS0 1516 aa23.47■■□□□ 1.35
DDX41-214ENST00000512334 LRRC7Q96NW7 1537 aa23.45■■□□□ 1.34
DDX41-214ENST00000512334 UBAP1LF5GYI3 381 aa23.45■■□□□ 1.34
DDX41-214ENST00000512334 KCNA6P17658 529 aa23.45■■□□□ 1.34
DDX41-214ENST00000512334 TBX22Q9Y458 520 aa23.45■■□□□ 1.34
DDX41-214ENST00000512334 ADAMTS13Q76LX8 1427 aa23.43■■□□□ 1.34
DDX41-214ENST00000512334 DIP2AQ14689 1571 aa23.43■■□□□ 1.34
DDX41-214ENST00000512334 RGL3Q3MIN7 710 aa23.42■■□□□ 1.34
DDX41-214ENST00000512334 RPGRIP1LQ68CZ1 1315 aa23.41■■□□□ 1.34
DDX41-214ENST00000512334 VGFO15240 615 aaPredicted RBP23.4■■□□□ 1.34
DDX41-214ENST00000512334 NWD1Q149M9 1564 aa23.4■■□□□ 1.34
DDX41-214ENST00000512334 SETBP1Q9Y6X0 1596 aa23.39■■□□□ 1.33
DDX41-214ENST00000512334 NRXN3Q9Y4C0 1643 aa23.38■■□□□ 1.33
DDX41-214ENST00000512334 PROSER2Q86WR7 435 aaPredicted RBP23.38■■□□□ 1.33
DDX41-214ENST00000512334 CHD2O14647 1828 aaKnown RBP23.38■■□□□ 1.33
DDX41-214ENST00000512334 PPLO60437 1756 aa23.37■■□□□ 1.33
DDX41-214ENST00000512334 SPATA31E1Q6ZUB1 1445 aa23.37■■□□□ 1.33
DDX41-214ENST00000512334 TOM1O60784 492 aa23.37■■□□□ 1.33
DDX41-214ENST00000512334 NKTRP30414 1462 aaKnown RBP23.36■■□□□ 1.33
DDX41-214ENST00000512334 SCAF1Q9H7N4 1312 aaKnown RBP23.35■■□□□ 1.33
DDX41-214ENST00000512334 RBM33Q96EV2 1170 aaKnown RBP23.35■■□□□ 1.33
DDX41-214ENST00000512334 TMEM94Q12767 1356 aa23.35■■□□□ 1.33
DDX41-214ENST00000512334 PIK3R4Q99570 1358 aa23.35■■□□□ 1.33
DDX41-214ENST00000512334 ANKRD30BQ9BXX2 1392 aa23.35■■□□□ 1.33
DDX41-214ENST00000512334 XIRP1Q702N8 1843 aaKnown RBP23.34■■□□□ 1.33
DDX41-214ENST00000512334 PIP4K2BP78356 416 aa23.33■■□□□ 1.33
DDX41-214ENST00000512334 TRIM26Q12899 539 aaPredicted RBP23.32■■□□□ 1.32
DDX41-214ENST00000512334 AMOTL2Q9Y2J4 779 aa23.31■■□□□ 1.32
DDX41-214ENST00000512334 METP08581 1390 aa23.3■■□□□ 1.32
DDX41-214ENST00000512334 PTPRUQ92729 1446 aa23.3■■□□□ 1.32
DDX41-214ENST00000512334 IFT172Q9UG01 1749 aa23.29■■□□□ 1.32
DDX41-214ENST00000512334 ADGRF5Q8IZF2 1346 aa23.29■■□□□ 1.32
DDX41-214ENST00000512334 C14orf37Q86TY3 774 aa23.27■■□□□ 1.32
DDX41-214ENST00000512334 ALKQ9UM73 1620 aa23.26■■□□□ 1.31
DDX41-214ENST00000512334 MSH6P52701 1360 aa23.26■■□□□ 1.31
DDX41-214ENST00000512334 XRN1Q8IZH2 1706 aaKnown RBP23.24■■□□□ 1.31
DDX41-214ENST00000512334 SETD1AO15047 1707 aaKnown RBP23.23■■□□□ 1.31
DDX41-214ENST00000512334 NCOA3Q9Y6Q9 1424 aa23.2■■□□□ 1.3
DDX41-214ENST00000512334 PIK3C2GO75747 1445 aa23.19■■□□□ 1.3
DDX41-214ENST00000512334 MYOM2P54296 1465 aa23.18■■□□□ 1.3
DDX41-214ENST00000512334 KDM2AQ9Y2K7 1162 aa23.17■■□□□ 1.3
DDX41-214ENST00000512334 DCAF11Q8TEB1 546 aa23.16■■□□□ 1.3
DDX41-214ENST00000512334 C19orf44Q9H6X5 657 aa23.15■■□□□ 1.3
DDX41-214ENST00000512334 ATF3P18847 181 aa23.14■■□□□ 1.29
DDX41-214ENST00000512334 HSPA1LP34931 641 aa23.14■■□□□ 1.29
DDX41-214ENST00000512334 NRXN1Q9ULB1 1477 aa23.13■■□□□ 1.29
DDX41-214ENST00000512334 TMEM132EQ6IEE7 984 aa23.13■■□□□ 1.29
DDX41-214ENST00000512334 PTCH1Q13635 1447 aa23.13■■□□□ 1.29
DDX41-214ENST00000512334 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.13■■□□□ 1.29
DDX41-214ENST00000512334 CADPS2Q86UW7 1296 aa23.12■■□□□ 1.29
DDX41-214ENST00000512334 STK26Q9P289 416 aa23.12■■□□□ 1.29
DDX41-214ENST00000512334 ROBO2Q9HCK4 1378 aa23.12■■□□□ 1.29
DDX41-214ENST00000512334 CFAP70Q5T0N1 1121 aa23.11■■□□□ 1.29
DDX41-214ENST00000512334 C14orf93Q9H972 538 aaKnown RBP23.11■■□□□ 1.29
DDX41-214ENST00000512334 SLAIN2Q9P270 581 aa23.1■■□□□ 1.29
DDX41-214ENST00000512334 DHX57Q6P158 1386 aaKnown RBP23.1■■□□□ 1.29
DDX41-214ENST00000512334 ASXL1Q8IXJ9 1541 aa23.09■■□□□ 1.29
DDX41-214ENST00000512334 LAMC1P11047 1609 aa23.09■■□□□ 1.29
DDX41-214ENST00000512334 FAM135BQ49AJ0 1406 aa23.08■■□□□ 1.29
DDX41-214ENST00000512334 STAC3Q96MF2 364 aa23.08■■□□□ 1.29
DDX41-214ENST00000512334 ROBO1Q9Y6N7 1651 aa23.08■■□□□ 1.29
DDX41-214ENST00000512334 PRAG1Q86YV5 1406 aa23.08■■□□□ 1.28
DDX41-214ENST00000512334 ADGRL3Q9HAR2 1447 aa23.08■■□□□ 1.28
DDX41-214ENST00000512334 LRPPRCP42704 1394 aaKnown RBP23.07■■□□□ 1.28
DDX41-214ENST00000512334 NALCNQ8IZF0 1738 aa23.06■■□□□ 1.28
DDX41-214ENST00000512334 SIN3AQ96ST3 1273 aa23.06■■□□□ 1.28
DDX41-214ENST00000512334 DCCP43146 1447 aa23.06■■□□□ 1.28
DDX41-214ENST00000512334 YTHDC2Q9H6S0 1430 aaKnown RBP23.06■■□□□ 1.28
DDX41-214ENST00000512334 NEUROD1Q13562 356 aa23.05■■□□□ 1.28
DDX41-214ENST00000512334 ABCC11Q96J66 1382 aa23.03■■□□□ 1.28
DDX41-214ENST00000512334 KNDC1Q76NI1 1749 aa23.03■■□□□ 1.28
DDX41-214ENST00000512334 TECPR2O15040 1411 aa23.03■■□□□ 1.28
DDX41-214ENST00000512334 WAPLQ7Z5K2 1190 aa23.02■■□□□ 1.28
DDX41-214ENST00000512334 MST1RQ04912 1400 aa22.99■■□□□ 1.27
DDX41-214ENST00000512334 PCGF6Q9BYE7 350 aa22.98■■□□□ 1.27
DDX41-214ENST00000512334 PLEKHH1Q9ULM0 1364 aa22.98■■□□□ 1.27
DDX41-214ENST00000512334 ADGRB1O14514 1584 aa22.97■■□□□ 1.27
DDX41-214ENST00000512334 L3MBTL2Q969R5 705 aa22.96■■□□□ 1.27
DDX41-214ENST00000512334 PHLPP1O60346 1717 aa22.95■■□□□ 1.26
DDX41-214ENST00000512334 TRAK1Q9UPV9 953 aa22.95■■□□□ 1.26
DDX41-214ENST00000512334 BRINP3Q76B58 766 aa22.94■■□□□ 1.26
DDX41-214ENST00000512334 SIRT1Q96EB6 747 aa22.94■■□□□ 1.26
DDX41-214ENST00000512334 PRAM1Q96QH2 718 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms