RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 UBAP1LF5GYI3 381 aa20■□□□□ 0.79
RNF4-215ENST00000511843 SLC26A8Q96RN1 970 aa20■□□□□ 0.79
RNF4-215ENST00000511843 LRRC7Q96NW7 1537 aa19.99■□□□□ 0.79
RNF4-215ENST00000511843 NUTM2DQ5VT03 806 aaPredicted RBP19.99■□□□□ 0.79
RNF4-215ENST00000511843 KIF1BO60333 1816 aa19.98■□□□□ 0.79
RNF4-215ENST00000511843 TRPM2O94759 1503 aa19.97■□□□□ 0.79
RNF4-215ENST00000511843 BCANQ96GW7 911 aa19.97■□□□□ 0.79
RNF4-215ENST00000511843 PPP1R15AO75807 674 aaPredicted RBP19.96■□□□□ 0.79
RNF4-215ENST00000511843 ALKQ9UM73 1620 aa19.94■□□□□ 0.78
RNF4-215ENST00000511843 SLC4A1APQ9BWU0 796 aaKnown RBP19.94■□□□□ 0.78
RNF4-215ENST00000511843 PLEKHG1Q9ULL1 1385 aa19.94■□□□□ 0.78
RNF4-215ENST00000511843 CHD2O14647 1828 aaKnown RBP19.93■□□□□ 0.78
RNF4-215ENST00000511843 FOXD1Q16676 465 aa19.92■□□□□ 0.78
RNF4-215ENST00000511843 PIP4K2BP78356 416 aa19.91■□□□□ 0.78
RNF4-215ENST00000511843 SCAF1Q9H7N4 1312 aaKnown RBP19.91■□□□□ 0.78
RNF4-215ENST00000511843 NWD1Q149M9 1564 aa19.91■□□□□ 0.78
RNF4-215ENST00000511843 ZNF326Q5BKZ1 582 aaKnown RBP19.89■□□□□ 0.77
RNF4-215ENST00000511843 RBM33Q96EV2 1170 aaKnown RBP19.89■□□□□ 0.77
RNF4-215ENST00000511843 NRXN3Q9Y4C0 1643 aa19.89■□□□□ 0.77
RNF4-215ENST00000511843 HDGFP51858 240 aaKnown RBP19.88■□□□□ 0.77
RNF4-215ENST00000511843 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.88■□□□□ 0.77
RNF4-215ENST00000511843 NEXMIFQ5QGS0 1516 aa19.87■□□□□ 0.77
RNF4-215ENST00000511843 ADAMTS13Q76LX8 1427 aa19.87■□□□□ 0.77
RNF4-215ENST00000511843 SETD5Q9C0A6 1442 aa19.87■□□□□ 0.77
RNF4-215ENST00000511843 TOM1O60784 492 aa19.86■□□□□ 0.77
RNF4-215ENST00000511843 KCNA6P17658 529 aa19.86■□□□□ 0.77
RNF4-215ENST00000511843 DIP2AQ14689 1571 aa19.85■□□□□ 0.77
RNF4-215ENST00000511843 TMEM94Q12767 1356 aa19.84■□□□□ 0.77
RNF4-215ENST00000511843 MPHOSPH9Q99550 1183 aa19.84■□□□□ 0.77
RNF4-215ENST00000511843 RAB3GAP2Q9H2M9 1393 aa19.83■□□□□ 0.77
RNF4-215ENST00000511843 PPLO60437 1756 aa19.83■□□□□ 0.77
RNF4-215ENST00000511843 NKTRP30414 1462 aaKnown RBP19.83■□□□□ 0.76
RNF4-215ENST00000511843 PROSER2Q86WR7 435 aaPredicted RBP19.82■□□□□ 0.76
RNF4-215ENST00000511843 SETBP1Q9Y6X0 1596 aa19.82■□□□□ 0.76
RNF4-215ENST00000511843 TBX22Q9Y458 520 aa19.81■□□□□ 0.76
RNF4-215ENST00000511843 PTPRUQ92729 1446 aa19.78■□□□□ 0.76
RNF4-215ENST00000511843 HSPA1LP34931 641 aa19.78■□□□□ 0.76
RNF4-215ENST00000511843 SETD1AO15047 1707 aaKnown RBP19.77■□□□□ 0.76
RNF4-215ENST00000511843 XRN1Q8IZH2 1706 aaKnown RBP19.76■□□□□ 0.75
RNF4-215ENST00000511843 IFT172Q9UG01 1749 aa19.76■□□□□ 0.75
RNF4-215ENST00000511843 CCDC144AA2RUR9 1427 aa19.76■□□□□ 0.75
RNF4-215ENST00000511843 METP08581 1390 aa19.74■□□□□ 0.75
RNF4-215ENST00000511843 PIK3R4Q99570 1358 aa19.73■□□□□ 0.75
RNF4-215ENST00000511843 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.73■□□□□ 0.75
RNF4-215ENST00000511843 ROBO1Q9Y6N7 1651 aa19.72■□□□□ 0.75
RNF4-215ENST00000511843 AMOTL2Q9Y2J4 779 aa19.72■□□□□ 0.75
RNF4-215ENST00000511843 SPATA31E1Q6ZUB1 1445 aa19.71■□□□□ 0.75
RNF4-215ENST00000511843 RGL3Q3MIN7 710 aa19.71■□□□□ 0.75
RNF4-215ENST00000511843 MSH6P52701 1360 aa19.7■□□□□ 0.74
RNF4-215ENST00000511843 C14orf37Q86TY3 774 aa19.69■□□□□ 0.74
RNF4-215ENST00000511843 DISP3Q9P2K9 1392 aa19.68■□□□□ 0.74
RNF4-215ENST00000511843 VGFO15240 615 aaPredicted RBP19.67■□□□□ 0.74
RNF4-215ENST00000511843 RPGRIP1LQ68CZ1 1315 aa19.67■□□□□ 0.74
RNF4-215ENST00000511843 NALCNQ8IZF0 1738 aa19.66■□□□□ 0.74
RNF4-215ENST00000511843 ACIN1Q9UKV3 1341 aaKnown RBP19.66■□□□□ 0.74
RNF4-215ENST00000511843 ADGRF5Q8IZF2 1346 aa19.65■□□□□ 0.74
RNF4-215ENST00000511843 MED1Q15648 1581 aaPredicted RBP19.63■□□□□ 0.73
RNF4-215ENST00000511843 FAM135BQ49AJ0 1406 aa19.63■□□□□ 0.73
RNF4-215ENST00000511843 NCOA3Q9Y6Q9 1424 aa19.63■□□□□ 0.73
RNF4-215ENST00000511843 SLAIN2Q9P270 581 aa19.62■□□□□ 0.73
RNF4-215ENST00000511843 PHLPP1O60346 1717 aa19.62■□□□□ 0.73
RNF4-215ENST00000511843 ANKRD30BQ9BXX2 1392 aa19.6■□□□□ 0.73
RNF4-215ENST00000511843 C19orf44Q9H6X5 657 aa19.59■□□□□ 0.73
RNF4-215ENST00000511843 ASXL1Q8IXJ9 1541 aa19.59■□□□□ 0.73
RNF4-215ENST00000511843 ROBO2Q9HCK4 1378 aa19.57■□□□□ 0.72
RNF4-215ENST00000511843 ATF3P18847 181 aa19.57■□□□□ 0.72
RNF4-215ENST00000511843 HRCP23327 699 aa19.57■□□□□ 0.72
RNF4-215ENST00000511843 PIK3C2GO75747 1445 aa19.57■□□□□ 0.72
RNF4-215ENST00000511843 PTCH1Q13635 1447 aa19.55■□□□□ 0.72
RNF4-215ENST00000511843 CADPS2Q86UW7 1296 aa19.55■□□□□ 0.72
RNF4-215ENST00000511843 ADGRL3Q9HAR2 1447 aa19.55■□□□□ 0.72
RNF4-215ENST00000511843 ILDR2Q71H61 639 aa19.54■□□□□ 0.72
RNF4-215ENST00000511843 COL16A1Q07092 1604 aaPredicted RBP19.54■□□□□ 0.72
RNF4-215ENST00000511843 MYOM2P54296 1465 aa19.54■□□□□ 0.72
RNF4-215ENST00000511843 KNDC1Q76NI1 1749 aa19.54■□□□□ 0.72
RNF4-215ENST00000511843 DCCP43146 1447 aa19.53■□□□□ 0.72
RNF4-215ENST00000511843 TMEM132EQ6IEE7 984 aa19.53■□□□□ 0.72
RNF4-215ENST00000511843 STK26Q9P289 416 aa19.53■□□□□ 0.72
RNF4-215ENST00000511843 NRXN1Q9ULB1 1477 aa19.52■□□□□ 0.72
RNF4-215ENST00000511843 MST1RQ04912 1400 aa19.51■□□□□ 0.71
RNF4-215ENST00000511843 PRAG1Q86YV5 1406 aa19.51■□□□□ 0.71
RNF4-215ENST00000511843 LAMC1P11047 1609 aa19.51■□□□□ 0.71
RNF4-215ENST00000511843 AHDC1Q5TGY3 1603 aaPredicted RBP19.49■□□□□ 0.71
RNF4-215ENST00000511843 CFAP70Q5T0N1 1121 aa19.48■□□□□ 0.71
RNF4-215ENST00000511843 BRINP3Q76B58 766 aa19.48■□□□□ 0.71
RNF4-215ENST00000511843 KDM2AQ9Y2K7 1162 aa19.48■□□□□ 0.71
RNF4-215ENST00000511843 NHSL1Q5SYE7 1610 aa19.47■□□□□ 0.71
RNF4-215ENST00000511843 LRPPRCP42704 1394 aaKnown RBP19.47■□□□□ 0.71
RNF4-215ENST00000511843 TECPR2O15040 1411 aa19.46■□□□□ 0.71
RNF4-215ENST00000511843 YTHDC2Q9H6S0 1430 aaKnown RBP19.46■□□□□ 0.71
RNF4-215ENST00000511843 WAPLQ7Z5K2 1190 aa19.46■□□□□ 0.71
RNF4-215ENST00000511843 PLEKHH1Q9ULM0 1364 aa19.45■□□□□ 0.7
RNF4-215ENST00000511843 DCAF11Q8TEB1 546 aa19.45■□□□□ 0.7
RNF4-215ENST00000511843 C14orf93Q9H972 538 aaKnown RBP19.45■□□□□ 0.7
RNF4-215ENST00000511843 C1orf167Q5SNV9 1468 aa19.44■□□□□ 0.7
RNF4-215ENST00000511843 DDX17Q92841 729 aaKnown RBP19.44■□□□□ 0.7
RNF4-215ENST00000511843 CDC42BPGQ6DT37 1551 aa19.44■□□□□ 0.7
RNF4-215ENST00000511843 DHX57Q6P158 1386 aaKnown RBP19.44■□□□□ 0.7
RNF4-215ENST00000511843 ABCC11Q96J66 1382 aa19.43■□□□□ 0.7
RNF4-215ENST00000511843 PHF23Q9BUL5 403 aaPredicted RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms