RNA–Protein interactions for RNA: ENST00000510689.5

SPOCK1-209, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, human

TSL 4

Gene SPOCK1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOCK1-209	ENST00000510689	PLEKHG1	Q9ULL1	1385 aa		33.32	■■■□□ 2.92
SPOCK1-209	ENST00000510689	NWD1	Q149M9	1564 aa		33.31	■■■□□ 2.92
SPOCK1-209	ENST00000510689	KCNA6	P17658	529 aa		33.31	■■■□□ 2.92
SPOCK1-209	ENST00000510689	HSPA1L	P34931	641 aa		33.31	■■■□□ 2.92
SPOCK1-209	ENST00000510689	SPHKAP	Q2M3C7	1700 aa		33.31	■■■□□ 2.92
SPOCK1-209	ENST00000510689	DISP3	Q9P2K9	1392 aa		33.3	■■■□□ 2.92
SPOCK1-209	ENST00000510689	CHD2	O14647	1828 aa	Known RBP	33.29	■■■□□ 2.92
SPOCK1-209	ENST00000510689	SCAF1	Q9H7N4	1312 aa	Known RBP	33.26	■■■□□ 2.91
SPOCK1-209	ENST00000510689	HFM1	A2PYH4	1435 aa		33.23	■■■□□ 2.91
SPOCK1-209	ENST00000510689	HDGF	P51858	240 aa	Known RBP	33.22	■■■□□ 2.91
SPOCK1-209	ENST00000510689	NKTR	P30414	1462 aa	Known RBP	33.22	■■■□□ 2.91
SPOCK1-209	ENST00000510689	TMEM94	Q12767	1356 aa		33.21	■■■□□ 2.91
SPOCK1-209	ENST00000510689	ADAMTS13	Q76LX8	1427 aa		33.2	■■■□□ 2.91
SPOCK1-209	ENST00000510689	CHGA	P10645	457 aa	Known RBP	33.2	■■■□□ 2.91
SPOCK1-209	ENST00000510689	ILDR2	Q71H61	639 aa		33.2	■■■□□ 2.91
SPOCK1-209	ENST00000510689	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	33.2	■■■□□ 2.91
SPOCK1-209	ENST00000510689	TBX22	Q9Y458	520 aa		33.19	■■■□□ 2.9
SPOCK1-209	ENST00000510689	PPP1R15A	O75807	674 aa	Predicted RBP	33.15	■■■□□ 2.9
SPOCK1-209	ENST00000510689	CLTCL1	P53675	1640 aa		33.14	■■■□□ 2.9
SPOCK1-209	ENST00000510689	PROSER2	Q86WR7	435 aa	Predicted RBP	33.14	■■■□□ 2.9
SPOCK1-209	ENST00000510689	SENP3	Q9H4L4	574 aa	Predicted RBP	33.14	■■■□□ 2.9
SPOCK1-209	ENST00000510689	NUTM2D	Q5VT03	806 aa	Predicted RBP	33.13	■■■□□ 2.89
SPOCK1-209	ENST00000510689	BCAN	Q96GW7	911 aa		33.13	■■■□□ 2.89
SPOCK1-209	ENST00000510689	DIP2A	Q14689	1571 aa		33.13	■■■□□ 2.89
SPOCK1-209	ENST00000510689	TRPM2	O94759	1503 aa		33.12	■■■□□ 2.89
SPOCK1-209	ENST00000510689	RBM33	Q96EV2	1170 aa	Known RBP	33.11	■■■□□ 2.89
SPOCK1-209	ENST00000510689	NRXN3	Q9Y4C0	1643 aa		33.1	■■■□□ 2.89
SPOCK1-209	ENST00000510689	FAM135B	Q49AJ0	1406 aa		33.08	■■■□□ 2.89
SPOCK1-209	ENST00000510689	MED1	Q15648	1581 aa	Predicted RBP	33.07	■■■□□ 2.88
SPOCK1-209	ENST00000510689	PIK3R4	Q99570	1358 aa		33.07	■■■□□ 2.88
SPOCK1-209	ENST00000510689	KIF1B	O60333	1816 aa		33.06	■■■□□ 2.88
SPOCK1-209	ENST00000510689	SETBP1	Q9Y6X0	1596 aa		33.04	■■■□□ 2.88
SPOCK1-209	ENST00000510689	NEXMIF	Q5QGS0	1516 aa		33.02	■■■□□ 2.88
SPOCK1-209	ENST00000510689	PTPRU	Q92729	1446 aa		33.01	■■■□□ 2.87
SPOCK1-209	ENST00000510689	NCOA3	Q9Y6Q9	1424 aa		33.01	■■■□□ 2.87
SPOCK1-209	ENST00000510689	ROBO1	Q9Y6N7	1651 aa		33	■■■□□ 2.87
SPOCK1-209	ENST00000510689	TRIM52	Q96A61	297 aa		32.98	■■■□□ 2.87
SPOCK1-209	ENST00000510689	MSH6	P52701	1360 aa		32.96	■■■□□ 2.87
SPOCK1-209	ENST00000510689	XRN1	Q8IZH2	1706 aa	Known RBP	32.96	■■■□□ 2.87
SPOCK1-209	ENST00000510689	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.94	■■■□□ 2.86
SPOCK1-209	ENST00000510689	ZNF326	Q5BKZ1	582 aa	Known RBP	32.93	■■■□□ 2.86
SPOCK1-209	ENST00000510689	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.92	■■■□□ 2.86
SPOCK1-209	ENST00000510689	AMOTL2	Q9Y2J4	779 aa		32.92	■■■□□ 2.86
SPOCK1-209	ENST00000510689	SLAIN2	Q9P270	581 aa		32.9	■■■□□ 2.86
SPOCK1-209	ENST00000510689	MET	P08581	1390 aa		32.89	■■■□□ 2.86
SPOCK1-209	ENST00000510689	SOCS7	O14512	581 aa		32.87	■■■□□ 2.85
SPOCK1-209	ENST00000510689	SETD1A	O15047	1707 aa	Known RBP	32.87	■■■□□ 2.85
SPOCK1-209	ENST00000510689	PPL	O60437	1756 aa		32.85	■■■□□ 2.85
SPOCK1-209	ENST00000510689	C19orf44	Q9H6X5	657 aa		32.83	■■■□□ 2.85
SPOCK1-209	ENST00000510689	FOXD1	Q16676	465 aa		32.82	■■■□□ 2.84
SPOCK1-209	ENST00000510689	RPGRIP1L	Q68CZ1	1315 aa		32.79	■■■□□ 2.84
SPOCK1-209	ENST00000510689	MPHOSPH9	Q99550	1183 aa		32.79	■■■□□ 2.84
SPOCK1-209	ENST00000510689	PHLPP1	O60346	1717 aa		32.78	■■■□□ 2.84
SPOCK1-209	ENST00000510689	VGF	O15240	615 aa	Predicted RBP	32.76	■■■□□ 2.83
SPOCK1-209	ENST00000510689	CADPS2	Q86UW7	1296 aa		32.76	■■■□□ 2.83
SPOCK1-209	ENST00000510689	DCC	P43146	1447 aa		32.75	■■■□□ 2.83
SPOCK1-209	ENST00000510689	COL16A1	Q07092	1604 aa	Predicted RBP	32.74	■■■□□ 2.83
SPOCK1-209	ENST00000510689	C14orf37	Q86TY3	774 aa		32.74	■■■□□ 2.83
SPOCK1-209	ENST00000510689	SPATA31E1	Q6ZUB1	1445 aa		32.73	■■■□□ 2.83
SPOCK1-209	ENST00000510689	SETD5	Q9C0A6	1442 aa		32.73	■■■□□ 2.83
SPOCK1-209	ENST00000510689	IFT172	Q9UG01	1749 aa		32.71	■■■□□ 2.83
SPOCK1-209	ENST00000510689	PRAG1	Q86YV5	1406 aa		32.7	■■■□□ 2.83
SPOCK1-209	ENST00000510689	ATF3	P18847	181 aa		32.7	■■■□□ 2.83
SPOCK1-209	ENST00000510689	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.69	■■■□□ 2.82
SPOCK1-209	ENST00000510689	NALCN	Q8IZF0	1738 aa		32.69	■■■□□ 2.82
SPOCK1-209	ENST00000510689	RGS17	Q9UGC6	210 aa	Predicted RBP	32.69	■■■□□ 2.82
SPOCK1-209	ENST00000510689	CCDC144A	A2RUR9	1427 aa		32.68	■■■□□ 2.82
SPOCK1-209	ENST00000510689	ACIN1	Q9UKV3	1341 aa	Known RBP	32.67	■■■□□ 2.82
SPOCK1-209	ENST00000510689	ADGRL3	Q9HAR2	1447 aa		32.66	■■■□□ 2.82
SPOCK1-209	ENST00000510689	PHF23	Q9BUL5	403 aa	Predicted RBP	32.65	■■■□□ 2.82
SPOCK1-209	ENST00000510689	MST1R	Q04912	1400 aa		32.65	■■■□□ 2.82
SPOCK1-209	ENST00000510689	PTCH1	Q13635	1447 aa		32.65	■■■□□ 2.82
SPOCK1-209	ENST00000510689	BRINP3	Q76B58	766 aa		32.62	■■■□□ 2.81
SPOCK1-209	ENST00000510689	RAB3GAP2	Q9H2M9	1393 aa		32.61	■■■□□ 2.81
SPOCK1-209	ENST00000510689	ROBO2	Q9HCK4	1378 aa		32.61	■■■□□ 2.81
SPOCK1-209	ENST00000510689	JCAD	Q9P266	1359 aa		32.61	■■■□□ 2.81
SPOCK1-209	ENST00000510689	ADGRF5	Q8IZF2	1346 aa		32.61	■■■□□ 2.81
SPOCK1-209	ENST00000510689	ASXL1	Q8IXJ9	1541 aa		32.57	■■■□□ 2.8
SPOCK1-209	ENST00000510689	NHSL1	Q5SYE7	1610 aa		32.57	■■■□□ 2.8
SPOCK1-209	ENST00000510689	ANKRD30B	Q9BXX2	1392 aa		32.57	■■■□□ 2.8
SPOCK1-209	ENST00000510689	RGL3	Q3MIN7	710 aa		32.56	■■■□□ 2.8
SPOCK1-209	ENST00000510689	SHPRH	Q149N8	1683 aa		32.56	■■■□□ 2.8
SPOCK1-209	ENST00000510689	PIK3C2G	O75747	1445 aa		32.51	■■■□□ 2.79
SPOCK1-209	ENST00000510689	LRP6	O75581	1613 aa		32.48	■■■□□ 2.79
SPOCK1-209	ENST00000510689	TECPR2	O15040	1411 aa		32.48	■■■□□ 2.79
SPOCK1-209	ENST00000510689	LAMC1	P11047	1609 aa		32.48	■■■□□ 2.79
SPOCK1-209	ENST00000510689	C1orf167	Q5SNV9	1468 aa		32.47	■■■□□ 2.79
SPOCK1-209	ENST00000510689	POTEA	Q6S8J7	498 aa		32.46	■■■□□ 2.79
SPOCK1-209	ENST00000510689	NRXN1	Q9ULB1	1477 aa		32.46	■■■□□ 2.79
SPOCK1-209	ENST00000510689	SPATA31A6	Q5VVP1	1343 aa		32.46	■■■□□ 2.79
SPOCK1-209	ENST00000510689	KNDC1	Q76NI1	1749 aa		32.45	■■■□□ 2.78
SPOCK1-209	ENST00000510689	HRC	P23327	699 aa		32.44	■■■□□ 2.78
SPOCK1-209	ENST00000510689	LRPPRC	P42704	1394 aa	Known RBP	32.43	■■■□□ 2.78
SPOCK1-209	ENST00000510689	ABCC11	Q96J66	1382 aa		32.42	■■■□□ 2.78
SPOCK1-209	ENST00000510689	MYOM2	P54296	1465 aa		32.41	■■■□□ 2.78
SPOCK1-209	ENST00000510689	DDX17	Q92841	729 aa	Known RBP	32.39	■■■□□ 2.78
SPOCK1-209	ENST00000510689	CDC42BPG	Q6DT37	1551 aa		32.39	■■■□□ 2.78
SPOCK1-209	ENST00000510689	TMEM132E	Q6IEE7	984 aa		32.38	■■■□□ 2.77
SPOCK1-209	ENST00000510689	C14orf93	Q9H972	538 aa	Known RBP	32.37	■■■□□ 2.77
SPOCK1-209	ENST00000510689	ORAI2	Q96SN7	254 aa		32.35	■■■□□ 2.77

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms