RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 ALKQ9UM73 1620 aa34.72■■■■□ 3.15
SNF8-209ENST00000510558 XIRP1Q702N8 1843 aaKnown RBP34.71■■■■□ 3.15
SNF8-209ENST00000510558 PIP4K2BP78356 416 aa34.71■■■■□ 3.15
SNF8-209ENST00000510558 SCAF1Q9H7N4 1312 aaKnown RBP34.71■■■■□ 3.15
SNF8-209ENST00000510558 PPP1R15AO75807 674 aaPredicted RBP34.69■■■■□ 3.14
SNF8-209ENST00000510558 HDGFP51858 240 aaKnown RBP34.69■■■■□ 3.14
SNF8-209ENST00000510558 PLEKHG1Q9ULL1 1385 aa34.69■■■■□ 3.14
SNF8-209ENST00000510558 BCANQ96GW7 911 aa34.68■■■■□ 3.14
SNF8-209ENST00000510558 KCNA6P17658 529 aa34.65■■■■□ 3.14
SNF8-209ENST00000510558 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.64■■■■□ 3.14
SNF8-209ENST00000510558 SENP3Q9H4L4 574 aaPredicted RBP34.64■■■■□ 3.14
SNF8-209ENST00000510558 NWD1Q149M9 1564 aa34.64■■■■□ 3.14
SNF8-209ENST00000510558 TRIM52Q96A61 297 aa34.59■■■■□ 3.13
SNF8-209ENST00000510558 TRPM2O94759 1503 aa34.59■■■■□ 3.13
SNF8-209ENST00000510558 CHD2O14647 1828 aaKnown RBP34.58■■■■□ 3.13
SNF8-209ENST00000510558 NUTM2DQ5VT03 806 aaPredicted RBP34.58■■■■□ 3.13
SNF8-209ENST00000510558 CLTCL1P53675 1640 aa34.58■■■■□ 3.13
SNF8-209ENST00000510558 NKTRP30414 1462 aaKnown RBP34.58■■■■□ 3.13
SNF8-209ENST00000510558 HSPA1LP34931 641 aa34.56■■■■□ 3.12
SNF8-209ENST00000510558 TMEM94Q12767 1356 aa34.56■■■■□ 3.12
SNF8-209ENST00000510558 DISP3Q9P2K9 1392 aa34.54■■■■□ 3.12
SNF8-209ENST00000510558 DIP2AQ14689 1571 aa34.53■■■■□ 3.12
SNF8-209ENST00000510558 PROSER2Q86WR7 435 aaPredicted RBP34.53■■■■□ 3.12
SNF8-209ENST00000510558 TBX22Q9Y458 520 aa34.53■■■■□ 3.12
SNF8-209ENST00000510558 ADAMTS13Q76LX8 1427 aa34.53■■■■□ 3.12
SNF8-209ENST00000510558 KIF1BO60333 1816 aa34.51■■■■□ 3.12
SNF8-209ENST00000510558 SLC4A1APQ9BWU0 796 aaKnown RBP34.48■■■■□ 3.11
SNF8-209ENST00000510558 ZNF326Q5BKZ1 582 aaKnown RBP34.47■■■■□ 3.11
SNF8-209ENST00000510558 RBM33Q96EV2 1170 aaKnown RBP34.47■■■■□ 3.11
SNF8-209ENST00000510558 NRXN3Q9Y4C0 1643 aa34.43■■■■□ 3.1
SNF8-209ENST00000510558 NEXMIFQ5QGS0 1516 aa34.42■■■■□ 3.1
SNF8-209ENST00000510558 PIK3R4Q99570 1358 aa34.42■■■■□ 3.1
SNF8-209ENST00000510558 SETBP1Q9Y6X0 1596 aa34.41■■■■□ 3.1
SNF8-209ENST00000510558 MSH6P52701 1360 aa34.37■■■■□ 3.09
SNF8-209ENST00000510558 FAM135BQ49AJ0 1406 aa34.33■■■■□ 3.09
SNF8-209ENST00000510558 PTPRUQ92729 1446 aa34.32■■■■□ 3.08
SNF8-209ENST00000510558 NCOA3Q9Y6Q9 1424 aa34.31■■■■□ 3.08
SNF8-209ENST00000510558 FOXD1Q16676 465 aa34.31■■■■□ 3.08
SNF8-209ENST00000510558 MED1Q15648 1581 aaPredicted RBP34.31■■■■□ 3.08
SNF8-209ENST00000510558 ROBO1Q9Y6N7 1651 aa34.31■■■■□ 3.08
SNF8-209ENST00000510558 XRN1Q8IZH2 1706 aaKnown RBP34.29■■■■□ 3.08
SNF8-209ENST00000510558 AMOTL2Q9Y2J4 779 aa34.28■■■■□ 3.08
SNF8-209ENST00000510558 SETD5Q9C0A6 1442 aa34.28■■■■□ 3.08
SNF8-209ENST00000510558 MPHOSPH9Q99550 1183 aa34.27■■■■□ 3.08
SNF8-209ENST00000510558 ILDR2Q71H61 639 aa34.26■■■■□ 3.08
SNF8-209ENST00000510558 PPLO60437 1756 aa34.25■■■■□ 3.07
SNF8-209ENST00000510558 C14orf37Q86TY3 774 aa34.24■■■■□ 3.07
SNF8-209ENST00000510558 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.24■■■■□ 3.07
SNF8-209ENST00000510558 METP08581 1390 aa34.23■■■■□ 3.07
SNF8-209ENST00000510558 RPGRIP1LQ68CZ1 1315 aa34.22■■■■□ 3.07
SNF8-209ENST00000510558 ACIN1Q9UKV3 1341 aaKnown RBP34.22■■■■□ 3.07
SNF8-209ENST00000510558 CCDC144AA2RUR9 1427 aa34.21■■■■□ 3.07
SNF8-209ENST00000510558 VGFO15240 615 aaPredicted RBP34.2■■■■□ 3.07
SNF8-209ENST00000510558 SLAIN2Q9P270 581 aa34.2■■■■□ 3.07
SNF8-209ENST00000510558 SETD1AO15047 1707 aaKnown RBP34.18■■■■□ 3.06
SNF8-209ENST00000510558 C19orf44Q9H6X5 657 aa34.17■■■■□ 3.06
SNF8-209ENST00000510558 RAB3GAP2Q9H2M9 1393 aa34.15■■■■□ 3.06
SNF8-209ENST00000510558 CADPS2Q86UW7 1296 aa34.13■■■■□ 3.05
SNF8-209ENST00000510558 SPATA31E1Q6ZUB1 1445 aa34.12■■■■□ 3.05
SNF8-209ENST00000510558 PHLPP1O60346 1717 aa34.11■■■■□ 3.05
SNF8-209ENST00000510558 ATF3P18847 181 aa34.11■■■■□ 3.05
SNF8-209ENST00000510558 IFT172Q9UG01 1749 aa34.1■■■■□ 3.05
SNF8-209ENST00000510558 DCCP43146 1447 aa34.08■■■■□ 3.05
SNF8-209ENST00000510558 RGL3Q3MIN7 710 aa34.06■■■■□ 3.04
SNF8-209ENST00000510558 NALCNQ8IZF0 1738 aa34.04■■■■□ 3.04
SNF8-209ENST00000510558 PHF23Q9BUL5 403 aaPredicted RBP34.02■■■■□ 3.04
SNF8-209ENST00000510558 PTCH1Q13635 1447 aa34.02■■■■□ 3.04
SNF8-209ENST00000510558 ADGRL3Q9HAR2 1447 aa34.02■■■■□ 3.04
SNF8-209ENST00000510558 ANKRD30BQ9BXX2 1392 aa34.01■■■■□ 3.04
SNF8-209ENST00000510558 ADGRF5Q8IZF2 1346 aa34.01■■■■□ 3.03
SNF8-209ENST00000510558 COL16A1Q07092 1604 aaPredicted RBP34■■■■□ 3.03
SNF8-209ENST00000510558 PRAG1Q86YV5 1406 aa33.99■■■■□ 3.03
SNF8-209ENST00000510558 AHDC1Q5TGY3 1603 aaPredicted RBP33.97■■■■□ 3.03
SNF8-209ENST00000510558 SOCS7O14512 581 aa33.96■■■■□ 3.03
SNF8-209ENST00000510558 ROBO2Q9HCK4 1378 aa33.96■■■■□ 3.03
SNF8-209ENST00000510558 MST1RQ04912 1400 aa33.96■■■■□ 3.03
SNF8-209ENST00000510558 BRINP3Q76B58 766 aa33.93■■■■□ 3.02
SNF8-209ENST00000510558 JCADQ9P266 1359 aa33.92■■■■□ 3.02
SNF8-209ENST00000510558 ASXL1Q8IXJ9 1541 aa33.9■■■■□ 3.02
SNF8-209ENST00000510558 PIK3C2GO75747 1445 aa33.9■■■■□ 3.02
SNF8-209ENST00000510558 HRCP23327 699 aa33.89■■■■□ 3.02
SNF8-209ENST00000510558 NHSL1Q5SYE7 1610 aa33.86■■■■□ 3.01
SNF8-209ENST00000510558 MYOM2P54296 1465 aa33.83■■■■□ 3.01
SNF8-209ENST00000510558 KNDC1Q76NI1 1749 aa33.83■■■■□ 3.01
SNF8-209ENST00000510558 SHPRHQ149N8 1683 aa33.83■■■■□ 3.01
SNF8-209ENST00000510558 NRXN1Q9ULB1 1477 aa33.82■■■■□ 3
SNF8-209ENST00000510558 TECPR2O15040 1411 aa33.81■■■■□ 3
SNF8-209ENST00000510558 LRPPRCP42704 1394 aaKnown RBP33.81■■■■□ 3
SNF8-209ENST00000510558 C1orf167Q5SNV9 1468 aa33.81■■■■□ 3
SNF8-209ENST00000510558 RGS17Q9UGC6 210 aaPredicted RBP33.8■■■■□ 3
SNF8-209ENST00000510558 TMEM132EQ6IEE7 984 aa33.79■■■■□ 3
SNF8-209ENST00000510558 STK26Q9P289 416 aa33.79■■■■□ 3
SNF8-209ENST00000510558 LAMC1P11047 1609 aa33.79■■■■□ 3
SNF8-209ENST00000510558 ABCC11Q96J66 1382 aa33.76■■■■□ 3
SNF8-209ENST00000510558 CDC42BPGQ6DT37 1551 aa33.76■■■□□ 2.99
SNF8-209ENST00000510558 SPATA31A6Q5VVP1 1343 aa33.75■■■□□ 2.99
SNF8-209ENST00000510558 YTHDC2Q9H6S0 1430 aaKnown RBP33.74■■■□□ 2.99
SNF8-209ENST00000510558 C14orf93Q9H972 538 aaKnown RBP33.74■■■□□ 2.99
SNF8-209ENST00000510558 LRP6O75581 1613 aa33.72■■■□□ 2.99
SNF8-209ENST00000510558 WAPLQ7Z5K2 1190 aa33.71■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms