RNA–Protein interactions for RNA: ENST00000509694.1

KLHL3-210, Transcript of kelch like family member 3, humanhuman

TSL 5

Gene KLHL3, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-210ENST00000509694 TRIM52Q96A61 297 aa13.29□□□□□ -0.28
KLHL3-210ENST00000509694 SETD5Q9C0A6 1442 aa13.29□□□□□ -0.28
KLHL3-210ENST00000509694 CPS1P31327 1500 aa13.29□□□□□ -0.28
KLHL3-210ENST00000509694 TXNDC2Q86VQ3 553 aa13.28□□□□□ -0.28
KLHL3-210ENST00000509694 RIMS2Q9UQ26 1411 aa13.28□□□□□ -0.28
KLHL3-210ENST00000509694 FBXO41Q8TF61 875 aa13.27□□□□□ -0.29
KLHL3-210ENST00000509694 CHD2O14647 1828 aaKnown RBP13.27□□□□□ -0.29
KLHL3-210ENST00000509694 PPLO60437 1756 aa13.26□□□□□ -0.29
KLHL3-210ENST00000509694 RAB3GAP2Q9H2M9 1393 aa13.26□□□□□ -0.29
KLHL3-210ENST00000509694 NRXN3Q9Y4C0 1643 aa13.26□□□□□ -0.29
KLHL3-210ENST00000509694 EID1Q9Y6B2 187 aa13.26□□□□□ -0.29
KLHL3-210ENST00000509694 NWD1Q149M9 1564 aa13.25□□□□□ -0.29
KLHL3-210ENST00000509694 NEXMIFQ5QGS0 1516 aa13.25□□□□□ -0.29
KLHL3-210ENST00000509694 SLC4A1APQ9BWU0 796 aaKnown RBP13.25□□□□□ -0.29
KLHL3-210ENST00000509694 IFT172Q9UG01 1749 aa13.25□□□□□ -0.29
KLHL3-210ENST00000509694 CHGAP10645 457 aaKnown RBP13.24□□□□□ -0.29
KLHL3-210ENST00000509694 PLEKHG1Q9ULL1 1385 aa13.23□□□□□ -0.29
KLHL3-210ENST00000509694 DIP2AQ14689 1571 aa13.23□□□□□ -0.29
KLHL3-210ENST00000509694 LRRC7Q96NW7 1537 aa13.22□□□□□ -0.29
KLHL3-210ENST00000509694 SETD1AO15047 1707 aaKnown RBP13.22□□□□□ -0.29
KLHL3-210ENST00000509694 SETBP1Q9Y6X0 1596 aa13.21□□□□□ -0.29
KLHL3-210ENST00000509694 MPHOSPH9Q99550 1183 aa13.21□□□□□ -0.29
KLHL3-210ENST00000509694 ALKQ9UM73 1620 aa13.21□□□□□ -0.3
KLHL3-210ENST00000509694 NUTM2DQ5VT03 806 aaPredicted RBP13.2□□□□□ -0.3
KLHL3-210ENST00000509694 ADAMTS13Q76LX8 1427 aa13.2□□□□□ -0.3
KLHL3-210ENST00000509694 PPP1R15AO75807 674 aaPredicted RBP13.18□□□□□ -0.3
KLHL3-210ENST00000509694 SLC26A8Q96RN1 970 aa13.18□□□□□ -0.3
KLHL3-210ENST00000509694 XRN1Q8IZH2 1706 aaKnown RBP13.18□□□□□ -0.3
KLHL3-210ENST00000509694 NKTRP30414 1462 aaKnown RBP13.17□□□□□ -0.3
KLHL3-210ENST00000509694 ACIN1Q9UKV3 1341 aaKnown RBP13.17□□□□□ -0.3
KLHL3-210ENST00000509694 CCDC144AA2RUR9 1427 aa13.17□□□□□ -0.3
KLHL3-210ENST00000509694 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.17□□□□□ -0.3
KLHL3-210ENST00000509694 SPATA31E1Q6ZUB1 1445 aa13.15□□□□□ -0.3
KLHL3-210ENST00000509694 HDGFP51858 240 aaKnown RBP13.15□□□□□ -0.3
KLHL3-210ENST00000509694 ZNF326Q5BKZ1 582 aaKnown RBP13.15□□□□□ -0.3
KLHL3-210ENST00000509694 BCANQ96GW7 911 aa13.14□□□□□ -0.31
KLHL3-210ENST00000509694 KCNA6P17658 529 aa13.13□□□□□ -0.31
KLHL3-210ENST00000509694 HRCP23327 699 aa13.12□□□□□ -0.31
KLHL3-210ENST00000509694 PTPRUQ92729 1446 aa13.12□□□□□ -0.31
KLHL3-210ENST00000509694 PIK3R4Q99570 1358 aa13.11□□□□□ -0.31
KLHL3-210ENST00000509694 UBAP1LF5GYI3 381 aa13.11□□□□□ -0.31
KLHL3-210ENST00000509694 TBX22Q9Y458 520 aa13.11□□□□□ -0.31
KLHL3-210ENST00000509694 TMEM94Q12767 1356 aa13.1□□□□□ -0.31
KLHL3-210ENST00000509694 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.1□□□□□ -0.31
KLHL3-210ENST00000509694 ANKRD30BQ9BXX2 1392 aa13.09□□□□□ -0.31
KLHL3-210ENST00000509694 NALCNQ8IZF0 1738 aa13.09□□□□□ -0.31
KLHL3-210ENST00000509694 RPGRIP1LQ68CZ1 1315 aa13.09□□□□□ -0.31
KLHL3-210ENST00000509694 METP08581 1390 aa13.08□□□□□ -0.31
KLHL3-210ENST00000509694 RBM33Q96EV2 1170 aaKnown RBP13.07□□□□□ -0.32
KLHL3-210ENST00000509694 KNDC1Q76NI1 1749 aa13.07□□□□□ -0.32
KLHL3-210ENST00000509694 ASXL1Q8IXJ9 1541 aa13.07□□□□□ -0.32
KLHL3-210ENST00000509694 LAMC1P11047 1609 aa13.06□□□□□ -0.32
KLHL3-210ENST00000509694 ROBO1Q9Y6N7 1651 aa13.06□□□□□ -0.32
KLHL3-210ENST00000509694 MYOM2P54296 1465 aa13.06□□□□□ -0.32
KLHL3-210ENST00000509694 PROSER2Q86WR7 435 aaPredicted RBP13.06□□□□□ -0.32
KLHL3-210ENST00000509694 PIK3C2GO75747 1445 aa13.05□□□□□ -0.32
KLHL3-210ENST00000509694 NRXN1Q9ULB1 1477 aa13.05□□□□□ -0.32
KLHL3-210ENST00000509694 VGFO15240 615 aaPredicted RBP13.05□□□□□ -0.32
KLHL3-210ENST00000509694 TOM1O60784 492 aa13.05□□□□□ -0.32
KLHL3-210ENST00000509694 RGL3Q3MIN7 710 aa13.05□□□□□ -0.32
KLHL3-210ENST00000509694 ADGRF5Q8IZF2 1346 aa13.05□□□□□ -0.32
KLHL3-210ENST00000509694 PIP4K2BP78356 416 aa13.04□□□□□ -0.32
KLHL3-210ENST00000509694 PRAG1Q86YV5 1406 aa13.04□□□□□ -0.32
KLHL3-210ENST00000509694 AMOTL2Q9Y2J4 779 aa13.03□□□□□ -0.32
KLHL3-210ENST00000509694 NCOA3Q9Y6Q9 1424 aa13.03□□□□□ -0.32
KLHL3-210ENST00000509694 SCAF1Q9H7N4 1312 aaKnown RBP13.02□□□□□ -0.33
KLHL3-210ENST00000509694 MSH6P52701 1360 aa13.02□□□□□ -0.33
KLHL3-210ENST00000509694 PTCH1Q13635 1447 aa13.02□□□□□ -0.33
KLHL3-210ENST00000509694 PHLPP1O60346 1717 aa12.99□□□□□ -0.33
KLHL3-210ENST00000509694 ADGRL3Q9HAR2 1447 aa12.98□□□□□ -0.33
KLHL3-210ENST00000509694 ROBO2Q9HCK4 1378 aa12.98□□□□□ -0.33
KLHL3-210ENST00000509694 HSPA1LP34931 641 aa12.98□□□□□ -0.33
KLHL3-210ENST00000509694 DCCP43146 1447 aa12.97□□□□□ -0.33
KLHL3-210ENST00000509694 DHX57Q6P158 1386 aaKnown RBP12.97□□□□□ -0.33
KLHL3-210ENST00000509694 TRIM26Q12899 539 aaPredicted RBP12.97□□□□□ -0.33
KLHL3-210ENST00000509694 ADGRB1O14514 1584 aa12.97□□□□□ -0.33
KLHL3-210ENST00000509694 TECPR2O15040 1411 aa12.96□□□□□ -0.33
KLHL3-210ENST00000509694 FAM135BQ49AJ0 1406 aa12.96□□□□□ -0.33
KLHL3-210ENST00000509694 KIAA1210Q9ULL0 1709 aa12.96□□□□□ -0.33
KLHL3-210ENST00000509694 NHSL1Q5SYE7 1610 aa12.95□□□□□ -0.34
KLHL3-210ENST00000509694 C14orf37Q86TY3 774 aa12.95□□□□□ -0.34
KLHL3-210ENST00000509694 YTHDC2Q9H6S0 1430 aaKnown RBP12.95□□□□□ -0.34
KLHL3-210ENST00000509694 COL16A1Q07092 1604 aaPredicted RBP12.95□□□□□ -0.34
KLHL3-210ENST00000509694 LRPPRCP42704 1394 aaKnown RBP12.94□□□□□ -0.34
KLHL3-210ENST00000509694 CDC42BPGQ6DT37 1551 aa12.94□□□□□ -0.34
KLHL3-210ENST00000509694 ARHGEF28Q8N1W1 1705 aaKnown RBP12.94□□□□□ -0.34
KLHL3-210ENST00000509694 C19orf44Q9H6X5 657 aa12.94□□□□□ -0.34
KLHL3-210ENST00000509694 AHDC1Q5TGY3 1603 aaPredicted RBP12.94□□□□□ -0.34
KLHL3-210ENST00000509694 MST1RQ04912 1400 aa12.94□□□□□ -0.34
KLHL3-210ENST00000509694 FMN2Q9NZ56 1722 aa12.93□□□□□ -0.34
KLHL3-210ENST00000509694 TMEM132EQ6IEE7 984 aa12.93□□□□□ -0.34
KLHL3-210ENST00000509694 C14orf93Q9H972 538 aaKnown RBP12.93□□□□□ -0.34
KLHL3-210ENST00000509694 RGPD8O14715 1765 aaPredicted RBP12.93□□□□□ -0.34
KLHL3-210ENST00000509694 MED1Q15648 1581 aaPredicted RBP12.93□□□□□ -0.34
KLHL3-210ENST00000509694 CFAP70Q5T0N1 1121 aa12.92□□□□□ -0.34
KLHL3-210ENST00000509694 DCAF11Q8TEB1 546 aa12.92□□□□□ -0.34
KLHL3-210ENST00000509694 SLAIN2Q9P270 581 aa12.92□□□□□ -0.34
KLHL3-210ENST00000509694 DLC1Q96QB1 1528 aa12.92□□□□□ -0.34
KLHL3-210ENST00000509694 ABCC11Q96J66 1382 aa12.92□□□□□ -0.34
KLHL3-210ENST00000509694 ATF3P18847 181 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms