RNA–Protein interactions for RNA: ENST00000508619.1

LINC02171-201, Transcript of long intergenic non-protein coding RNA 2171, humanhuman

TSL 1 (best) BASIC

Gene LINC02171, Length 1,033 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02171-201ENST00000508619 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.46■□□□□ 0.87
LINC02171-201ENST00000508619 NKTRP30414 1462 aaKnown RBP20.44■□□□□ 0.86
LINC02171-201ENST00000508619 NWD1Q149M9 1564 aa20.44■□□□□ 0.86
LINC02171-201ENST00000508619 MYO5BQ9ULV0 1848 aa20.43■□□□□ 0.86
LINC02171-201ENST00000508619 SPHKAPQ2M3C7 1700 aa20.41■□□□□ 0.86
LINC02171-201ENST00000508619 SLC26A8Q96RN1 970 aa20.4■□□□□ 0.86
LINC02171-201ENST00000508619 TBX22Q9Y458 520 aa20.4■□□□□ 0.86
LINC02171-201ENST00000508619 DIP2AQ14689 1571 aa20.39■□□□□ 0.85
LINC02171-201ENST00000508619 PPP1R15AO75807 674 aaPredicted RBP20.39■□□□□ 0.85
LINC02171-201ENST00000508619 XIRP1Q702N8 1843 aaKnown RBP20.39■□□□□ 0.85
LINC02171-201ENST00000508619 PIK3R4Q99570 1358 aa20.38■□□□□ 0.85
LINC02171-201ENST00000508619 PIP4K2BP78356 416 aa20.38■□□□□ 0.85
LINC02171-201ENST00000508619 TRPM2O94759 1503 aa20.37■□□□□ 0.85
LINC02171-201ENST00000508619 TMEM94Q12767 1356 aa20.37■□□□□ 0.85
LINC02171-201ENST00000508619 CHGAP10645 457 aaKnown RBP20.36■□□□□ 0.85
LINC02171-201ENST00000508619 ADAMTS13Q76LX8 1427 aa20.36■□□□□ 0.85
LINC02171-201ENST00000508619 DISP3Q9P2K9 1392 aa20.35■□□□□ 0.85
LINC02171-201ENST00000508619 SCAF1Q9H7N4 1312 aaKnown RBP20.35■□□□□ 0.85
LINC02171-201ENST00000508619 HSPA1LP34931 641 aa20.35■□□□□ 0.85
LINC02171-201ENST00000508619 NCOA3Q9Y6Q9 1424 aa20.35■□□□□ 0.85
LINC02171-201ENST00000508619 CHD2O14647 1828 aaKnown RBP20.34■□□□□ 0.85
LINC02171-201ENST00000508619 BCANQ96GW7 911 aa20.34■□□□□ 0.85
LINC02171-201ENST00000508619 ACIN1Q9UKV3 1341 aaKnown RBP20.32■□□□□ 0.84
LINC02171-201ENST00000508619 PROSER2Q86WR7 435 aaPredicted RBP20.32■□□□□ 0.84
LINC02171-201ENST00000508619 FAM135BQ49AJ0 1406 aa20.32■□□□□ 0.84
LINC02171-201ENST00000508619 SETBP1Q9Y6X0 1596 aa20.3■□□□□ 0.84
LINC02171-201ENST00000508619 CLTCL1P53675 1640 aa20.29■□□□□ 0.84
LINC02171-201ENST00000508619 MSH6P52701 1360 aa20.28■□□□□ 0.84
LINC02171-201ENST00000508619 TRIM52Q96A61 297 aa20.27■□□□□ 0.84
LINC02171-201ENST00000508619 SLC4A1APQ9BWU0 796 aaKnown RBP20.26■□□□□ 0.83
LINC02171-201ENST00000508619 NEXMIFQ5QGS0 1516 aa20.26■□□□□ 0.83
LINC02171-201ENST00000508619 NRXN3Q9Y4C0 1643 aa20.25■□□□□ 0.83
LINC02171-201ENST00000508619 KIF1BO60333 1816 aa20.25■□□□□ 0.83
LINC02171-201ENST00000508619 ZNF326Q5BKZ1 582 aaKnown RBP20.23■□□□□ 0.83
LINC02171-201ENST00000508619 NUTM2DQ5VT03 806 aaPredicted RBP20.23■□□□□ 0.83
LINC02171-201ENST00000508619 RPGRIP1LQ68CZ1 1315 aa20.22■□□□□ 0.83
LINC02171-201ENST00000508619 MED1Q15648 1581 aaPredicted RBP20.21■□□□□ 0.83
LINC02171-201ENST00000508619 PTPRUQ92729 1446 aa20.19■□□□□ 0.82
LINC02171-201ENST00000508619 XRN1Q8IZH2 1706 aaKnown RBP20.19■□□□□ 0.82
LINC02171-201ENST00000508619 C19orf44Q9H6X5 657 aa20.18■□□□□ 0.82
LINC02171-201ENST00000508619 AMOTL2Q9Y2J4 779 aa20.18■□□□□ 0.82
LINC02171-201ENST00000508619 DCCP43146 1447 aa20.18■□□□□ 0.82
LINC02171-201ENST00000508619 ROBO1Q9Y6N7 1651 aa20.17■□□□□ 0.82
LINC02171-201ENST00000508619 VGFO15240 615 aaPredicted RBP20.17■□□□□ 0.82
LINC02171-201ENST00000508619 ILDR2Q71H61 639 aa20.17■□□□□ 0.82
LINC02171-201ENST00000508619 CADPS2Q86UW7 1296 aa20.17■□□□□ 0.82
LINC02171-201ENST00000508619 RBM33Q96EV2 1170 aaKnown RBP20.17■□□□□ 0.82
LINC02171-201ENST00000508619 SLAIN2Q9P270 581 aa20.17■□□□□ 0.82
LINC02171-201ENST00000508619 SENP3Q9H4L4 574 aaPredicted RBP20.16■□□□□ 0.82
LINC02171-201ENST00000508619 PRAG1Q86YV5 1406 aa20.16■□□□□ 0.82
LINC02171-201ENST00000508619 MPHOSPH9Q99550 1183 aa20.15■□□□□ 0.82
LINC02171-201ENST00000508619 METP08581 1390 aa20.15■□□□□ 0.82
LINC02171-201ENST00000508619 SETD5Q9C0A6 1442 aa20.15■□□□□ 0.82
LINC02171-201ENST00000508619 CCDC144AA2RUR9 1427 aa20.14■□□□□ 0.81
LINC02171-201ENST00000508619 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.13■□□□□ 0.81
LINC02171-201ENST00000508619 SOCS7O14512 581 aa20.11■□□□□ 0.81
LINC02171-201ENST00000508619 C14orf37Q86TY3 774 aa20.11■□□□□ 0.81
LINC02171-201ENST00000508619 PPLO60437 1756 aa20.11■□□□□ 0.81
LINC02171-201ENST00000508619 PTCH1Q13635 1447 aa20.1■□□□□ 0.81
LINC02171-201ENST00000508619 SPATA31E1Q6ZUB1 1445 aa20.1■□□□□ 0.81
LINC02171-201ENST00000508619 ATF3P18847 181 aa20.1■□□□□ 0.81
LINC02171-201ENST00000508619 SETD1AO15047 1707 aaKnown RBP20.1■□□□□ 0.81
LINC02171-201ENST00000508619 ANKRD30BQ9BXX2 1392 aa20.08■□□□□ 0.8
LINC02171-201ENST00000508619 FOXD1Q16676 465 aa20.07■□□□□ 0.8
LINC02171-201ENST00000508619 ADGRL3Q9HAR2 1447 aa20.07■□□□□ 0.8
LINC02171-201ENST00000508619 AHDC1Q5TGY3 1603 aaPredicted RBP20.05■□□□□ 0.8
LINC02171-201ENST00000508619 HRCP23327 699 aa20.05■□□□□ 0.8
LINC02171-201ENST00000508619 RAB3GAP2Q9H2M9 1393 aa20.05■□□□□ 0.8
LINC02171-201ENST00000508619 PHF23Q9BUL5 403 aaPredicted RBP20.04■□□□□ 0.8
LINC02171-201ENST00000508619 JCADQ9P266 1359 aa20.04■□□□□ 0.8
LINC02171-201ENST00000508619 PHLPP1O60346 1717 aa20.04■□□□□ 0.8
LINC02171-201ENST00000508619 COL16A1Q07092 1604 aaPredicted RBP20.03■□□□□ 0.8
LINC02171-201ENST00000508619 IFT172Q9UG01 1749 aa20.02■□□□□ 0.8
LINC02171-201ENST00000508619 MST1RQ04912 1400 aa20.02■□□□□ 0.79
LINC02171-201ENST00000508619 BRINP3Q76B58 766 aa20■□□□□ 0.79
LINC02171-201ENST00000508619 ROBO2Q9HCK4 1378 aa19.99■□□□□ 0.79
LINC02171-201ENST00000508619 TECPR2O15040 1411 aa19.99■□□□□ 0.79
LINC02171-201ENST00000508619 PIK3C2GO75747 1445 aa19.99■□□□□ 0.79
LINC02171-201ENST00000508619 ADGRF5Q8IZF2 1346 aa19.99■□□□□ 0.79
LINC02171-201ENST00000508619 NALCNQ8IZF0 1738 aa19.99■□□□□ 0.79
LINC02171-201ENST00000508619 ASXL1Q8IXJ9 1541 aa19.98■□□□□ 0.79
LINC02171-201ENST00000508619 SPATA31A6Q5VVP1 1343 aa19.97■□□□□ 0.79
LINC02171-201ENST00000508619 RGL3Q3MIN7 710 aa19.96■□□□□ 0.79
LINC02171-201ENST00000508619 MYOM2P54296 1465 aa19.96■□□□□ 0.79
LINC02171-201ENST00000508619 NRXN1Q9ULB1 1477 aa19.96■□□□□ 0.79
LINC02171-201ENST00000508619 LRPPRCP42704 1394 aaKnown RBP19.95■□□□□ 0.78
LINC02171-201ENST00000508619 ABCC11Q96J66 1382 aa19.94■□□□□ 0.78
LINC02171-201ENST00000508619 SHPRHQ149N8 1683 aa19.94■□□□□ 0.78
LINC02171-201ENST00000508619 RGS17Q9UGC6 210 aaPredicted RBP19.93■□□□□ 0.78
LINC02171-201ENST00000508619 NHSL1Q5SYE7 1610 aa19.93■□□□□ 0.78
LINC02171-201ENST00000508619 C1orf167Q5SNV9 1468 aa19.92■□□□□ 0.78
LINC02171-201ENST00000508619 CDC42BPGQ6DT37 1551 aa19.91■□□□□ 0.78
LINC02171-201ENST00000508619 LAMC1P11047 1609 aa19.91■□□□□ 0.78
LINC02171-201ENST00000508619 KNDC1Q76NI1 1749 aa19.91■□□□□ 0.78
LINC02171-201ENST00000508619 SIRT1Q96EB6 747 aa19.9■□□□□ 0.78
LINC02171-201ENST00000508619 STAC3Q96MF2 364 aa19.89■□□□□ 0.77
LINC02171-201ENST00000508619 C14orf93Q9H972 538 aaKnown RBP19.89■□□□□ 0.77
LINC02171-201ENST00000508619 LRRC59Q96AG4 307 aaKnown RBP19.87■□□□□ 0.77
LINC02171-201ENST00000508619 YTHDC2Q9H6S0 1430 aaKnown RBP19.86■□□□□ 0.77
LINC02171-201ENST00000508619 LRP6O75581 1613 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms