RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 TPRNQ4KMQ1 711 aa9.24□□□□□ -0.93
HMGB1P44-201ENST00000508597 SEPT9Q9UHD8 586 aaPredicted RBP9.24□□□□□ -0.93
HMGB1P44-201ENST00000508597 POLA1P09884 1462 aaPredicted RBP9.23□□□□□ -0.93
HMGB1P44-201ENST00000508597 FGD5Q6ZNL6 1462 aa9.23□□□□□ -0.93
HMGB1P44-201ENST00000508597 ZC3H15Q8WU90 426 aaKnown RBP9.23□□□□□ -0.93
HMGB1P44-201ENST00000508597 RABGEF1Q9UJ41 708 aa9.23□□□□□ -0.93
HMGB1P44-201ENST00000508597 SYNJ1O43426 1573 aa9.23□□□□□ -0.93
HMGB1P44-201ENST00000508597 SOGA1O94964 1423 aa9.22□□□□□ -0.93
HMGB1P44-201ENST00000508597 CERKQ8TCT0 537 aa9.22□□□□□ -0.93
HMGB1P44-201ENST00000508597 WDR97A6NE52 1622 aa9.21□□□□□ -0.93
HMGB1P44-201ENST00000508597 GNPATO15228 680 aa9.21□□□□□ -0.94
HMGB1P44-201ENST00000508597 ONECUT3O60422 494 aaPredicted RBP9.21□□□□□ -0.94
HMGB1P44-201ENST00000508597 TULP1O00294 542 aaPredicted RBP9.2□□□□□ -0.94
HMGB1P44-201ENST00000508597 HIC1Q14526 733 aa9.2□□□□□ -0.94
HMGB1P44-201ENST00000508597 NUDT18Q6ZVK8 323 aa9.2□□□□□ -0.94
HMGB1P44-201ENST00000508597 TATDN2Q93075 761 aa9.2□□□□□ -0.94
HMGB1P44-201ENST00000508597 PNMA3Q9UL41 463 aa9.19□□□□□ -0.94
HMGB1P44-201ENST00000508597 ADGRG1Q9Y653 693 aa9.19□□□□□ -0.94
HMGB1P44-201ENST00000508597 ABCA10Q8WWZ4 1543 aa9.19□□□□□ -0.94
HMGB1P44-201ENST00000508597 TARBP1Q13395 1621 aaKnown RBP9.19□□□□□ -0.94
HMGB1P44-201ENST00000508597 PACS2Q86VP3 889 aa9.18□□□□□ -0.94
HMGB1P44-201ENST00000508597 PHOX2BQ99453 314 aa9.18□□□□□ -0.94
HMGB1P44-201ENST00000508597 EYA1Q99502 592 aa9.18□□□□□ -0.94
HMGB1P44-201ENST00000508597 RBM27Q9P2N5 1060 aaKnown RBP9.18□□□□□ -0.94
HMGB1P44-201ENST00000508597 ZMYND10O75800 440 aa9.17□□□□□ -0.94
HMGB1P44-201ENST00000508597 MYT1LQ9UL68 1186 aa9.17□□□□□ -0.94
HMGB1P44-201ENST00000508597 RAD54L2Q9Y4B4 1467 aa9.16□□□□□ -0.94
HMGB1P44-201ENST00000508597 MRPL50Q8N5N7 158 aaKnown RBP9.16□□□□□ -0.94
HMGB1P44-201ENST00000508597 NLRP7Q8WX94 980 aa9.16□□□□□ -0.94
HMGB1P44-201ENST00000508597 BARGINQ6ZT62 677 aa9.14□□□□□ -0.95
HMGB1P44-201ENST00000508597 KCTD12Q96CX2 325 aaKnown RBP9.13□□□□□ -0.95
HMGB1P44-201ENST00000508597 ZFRQ96KR1 1074 aaKnown RBP9.13□□□□□ -0.95
HMGB1P44-201ENST00000508597 NBPF3Q9H094 633 aa9.13□□□□□ -0.95
HMGB1P44-201ENST00000508597 ZNF608Q9ULD9 1512 aaPredicted RBP9.12□□□□□ -0.95
HMGB1P44-201ENST00000508597 NBPF26B4DH59 902 aa9.12□□□□□ -0.95
HMGB1P44-201ENST00000508597 IRF6O14896 467 aa9.12□□□□□ -0.95
HMGB1P44-201ENST00000508597 FAM98CQ17RN3 349 aaKnown RBP9.12□□□□□ -0.95
HMGB1P44-201ENST00000508597 PXYLP1Q8TE99 480 aa9.12□□□□□ -0.95
HMGB1P44-201ENST00000508597 KIF27Q86VH2 1401 aa9.12□□□□□ -0.95
HMGB1P44-201ENST00000508597 EIF4G3O43432 1585 aaKnown RBP9.12□□□□□ -0.95
HMGB1P44-201ENST00000508597 TDRD9Q8NDG6 1382 aaKnown RBP9.12□□□□□ -0.95
HMGB1P44-201ENST00000508597 GAPVD1Q14C86 1478 aa9.11□□□□□ -0.95
HMGB1P44-201ENST00000508597 METTL3Q86U44 580 aaKnown RBP9.11□□□□□ -0.95
HMGB1P44-201ENST00000508597 RNF166Q96A37 237 aaPredicted RBP9.11□□□□□ -0.95
HMGB1P44-201ENST00000508597 STAC3Q96MF2 364 aa9.11□□□□□ -0.95
HMGB1P44-201ENST00000508597 ABCA5Q8WWZ7 1642 aa9.11□□□□□ -0.95
HMGB1P44-201ENST00000508597 AQRO60306 1485 aaKnown RBP eCLIP9.1□□□□□ -0.95
HMGB1P44-201ENST00000508597 GRIN2BQ13224 1484 aa9.1□□□□□ -0.95
HMGB1P44-201ENST00000508597 RCCD1A6NED2 376 aa9.1□□□□□ -0.95
HMGB1P44-201ENST00000508597 BCAMP50895 628 aa9.1□□□□□ -0.95
HMGB1P44-201ENST00000508597 MAP2K5Q13163 448 aa9.1□□□□□ -0.95
HMGB1P44-201ENST00000508597 SAMD7Q7Z3H4 446 aa9.1□□□□□ -0.95
HMGB1P44-201ENST00000508597 LAPTM4BQ86VI4 370 aa9.1□□□□□ -0.95
HMGB1P44-201ENST00000508597 WNT2BQ93097 391 aa9.1□□□□□ -0.95
HMGB1P44-201ENST00000508597 EEA1Q15075 1411 aa9.09□□□□□ -0.95
HMGB1P44-201ENST00000508597 CCDC102AQ96A19 550 aa9.09□□□□□ -0.95
HMGB1P44-201ENST00000508597 ERICH3Q5RHP9 1530 aa9.09□□□□□ -0.95
HMGB1P44-201ENST00000508597 SWT1Q5T5J6 900 aaKnown RBP9.08□□□□□ -0.96
HMGB1P44-201ENST00000508597 SLC24A3Q9HC58 644 aa9.08□□□□□ -0.96
HMGB1P44-201ENST00000508597 MAGI1Q96QZ7 1491 aaPredicted RBP9.08□□□□□ -0.96
HMGB1P44-201ENST00000508597 MINK1Q8N4C8 1332 aaPredicted RBP9.07□□□□□ -0.96
HMGB1P44-201ENST00000508597 GOLGA8CPA6NN73 597 aa9.07□□□□□ -0.96
HMGB1P44-201ENST00000508597 KRI1Q8N9T8 703 aaKnown RBP9.07□□□□□ -0.96
HMGB1P44-201ENST00000508597 RBM46Q8TBY0 533 aaKnown RBP9.07□□□□□ -0.96
HMGB1P44-201ENST00000508597 PBRM1Q86U86 1689 aa9.07□□□□□ -0.96
HMGB1P44-201ENST00000508597 OATP04181 439 aa9.06□□□□□ -0.96
HMGB1P44-201ENST00000508597 THSD4Q6ZMP0 1018 aa9.06□□□□□ -0.96
HMGB1P44-201ENST00000508597 SOWAHBA6NEL2 793 aa9.05□□□□□ -0.96
HMGB1P44-201ENST00000508597 PTPN5P54829 565 aa9.05□□□□□ -0.96
HMGB1P44-201ENST00000508597 REPIN1Q9BWE0 567 aaKnown RBP9.05□□□□□ -0.96
HMGB1P44-201ENST00000508597 IGF1RP08069 1367 aa9.04□□□□□ -0.96
HMGB1P44-201ENST00000508597 TMEM134Q9H6X4 195 aa9.04□□□□□ -0.96
HMGB1P44-201ENST00000508597 CUL7Q14999 1698 aa9.04□□□□□ -0.96
HMGB1P44-201ENST00000508597 DNAJB2P25686 324 aa9.03□□□□□ -0.96
HMGB1P44-201ENST00000508597 ANKK1Q8NFD2 765 aa9.03□□□□□ -0.96
HMGB1P44-201ENST00000508597 WBP1LQ9NX94 342 aa9.03□□□□□ -0.96
HMGB1P44-201ENST00000508597 FHAD1B1AJZ9 1412 aa9.03□□□□□ -0.96
HMGB1P44-201ENST00000508597 SYNJ2O15056 1496 aa9.02□□□□□ -0.96
HMGB1P44-201ENST00000508597 SNAPC4Q5SXM2 1469 aa9.02□□□□□ -0.96
HMGB1P44-201ENST00000508597 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.02□□□□□ -0.97
HMGB1P44-201ENST00000508597 TRIM66O15016 1216 aa9.01□□□□□ -0.97
HMGB1P44-201ENST00000508597 ADAMTS12P58397 1594 aa9.01□□□□□ -0.97
HMGB1P44-201ENST00000508597 CHMP7Q8WUX9 453 aaPredicted RBP9.01□□□□□ -0.97
HMGB1P44-201ENST00000508597 LRCH3Q96II8 777 aa9.01□□□□□ -0.97
HMGB1P44-201ENST00000508597 HPS5Q9UPZ3 1129 aa9.01□□□□□ -0.97
HMGB1P44-201ENST00000508597 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9□□□□□ -0.97
HMGB1P44-201ENST00000508597 SLC10A3P09131 477 aa9□□□□□ -0.97
HMGB1P44-201ENST00000508597 MDM2Q00987 491 aaPredicted RBP9□□□□□ -0.97
HMGB1P44-201ENST00000508597 RUSC2Q8N2Y8 1516 aa9□□□□□ -0.97
HMGB1P44-201ENST00000508597 CARMIL1Q5VZK9 1371 aa8.99□□□□□ -0.97
HMGB1P44-201ENST00000508597 TMUB1Q9BVT8 246 aa8.99□□□□□ -0.97
HMGB1P44-201ENST00000508597 RNF40O75150 1001 aa8.98□□□□□ -0.97
HMGB1P44-201ENST00000508597 AK7Q96M32 723 aa8.98□□□□□ -0.97
HMGB1P44-201ENST00000508597 PRXQ9BXM0 1461 aa8.97□□□□□ -0.97
HMGB1P44-201ENST00000508597 RAPGEF2Q9Y4G8 1499 aa8.97□□□□□ -0.97
HMGB1P44-201ENST00000508597 DAXXQ9UER7 740 aaPredicted RBP8.97□□□□□ -0.97
HMGB1P44-201ENST00000508597 CHD1O14646 1710 aa8.97□□□□□ -0.97
HMGB1P44-201ENST00000508597 GRIN2AQ12879 1464 aa8.96□□□□□ -0.97
HMGB1P44-201ENST00000508597 TSR3Q9UJK0 312 aaKnown RBP8.96□□□□□ -0.98
HMGB1P44-201ENST00000508597 APLP1P51693 650 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms