RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-222ENST00000507459 CPS1P31327 1500 aa21.09■□□□□ 0.97
CCHCR1-222ENST00000507459 IQSEC2Q5JU85 1478 aa21.09■□□□□ 0.97
CCHCR1-222ENST00000507459 ZFYVE9O95405 1425 aa21.09■□□□□ 0.97
CCHCR1-222ENST00000507459 SETD5Q9C0A6 1442 aa21.09■□□□□ 0.97
CCHCR1-222ENST00000507459 FOXD1Q16676 465 aa21.08■□□□□ 0.97
CCHCR1-222ENST00000507459 ZNF326Q5BKZ1 582 aaKnown RBP21.08■□□□□ 0.97
CCHCR1-222ENST00000507459 UBAP1LF5GYI3 381 aa21.07■□□□□ 0.96
CCHCR1-222ENST00000507459 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.07■□□□□ 0.96
CCHCR1-222ENST00000507459 MPHOSPH9Q99550 1183 aa21.06■□□□□ 0.96
CCHCR1-222ENST00000507459 STRCP1A6NGW2 1772 aa21.05■□□□□ 0.96
CCHCR1-222ENST00000507459 PLEKHG1Q9ULL1 1385 aa21.04■□□□□ 0.96
CCHCR1-222ENST00000507459 CLTCL1P53675 1640 aa21.04■□□□□ 0.96
CCHCR1-222ENST00000507459 TRPM2O94759 1503 aa21.04■□□□□ 0.96
CCHCR1-222ENST00000507459 RAB3GAP2Q9H2M9 1393 aa21.02■□□□□ 0.96
CCHCR1-222ENST00000507459 LRRC7Q96NW7 1537 aa20.99■□□□□ 0.95
CCHCR1-222ENST00000507459 KCNA6P17658 529 aa20.99■□□□□ 0.95
CCHCR1-222ENST00000507459 ACIN1Q9UKV3 1341 aaKnown RBP20.99■□□□□ 0.95
CCHCR1-222ENST00000507459 SCAF1Q9H7N4 1312 aaKnown RBP20.98■□□□□ 0.95
CCHCR1-222ENST00000507459 KIF1BO60333 1816 aa20.97■□□□□ 0.95
CCHCR1-222ENST00000507459 TOM1O60784 492 aa20.97■□□□□ 0.95
CCHCR1-222ENST00000507459 PIP4K2BP78356 416 aa20.96■□□□□ 0.95
CCHCR1-222ENST00000507459 TBX22Q9Y458 520 aa20.96■□□□□ 0.95
CCHCR1-222ENST00000507459 PROSER2Q86WR7 435 aaPredicted RBP20.95■□□□□ 0.94
CCHCR1-222ENST00000507459 RBM33Q96EV2 1170 aaKnown RBP20.95■□□□□ 0.94
CCHCR1-222ENST00000507459 ADAMTS13Q76LX8 1427 aa20.94■□□□□ 0.94
CCHCR1-222ENST00000507459 CCDC144AA2RUR9 1427 aa20.92■□□□□ 0.94
CCHCR1-222ENST00000507459 TMEM94Q12767 1356 aa20.91■□□□□ 0.94
CCHCR1-222ENST00000507459 NEXMIFQ5QGS0 1516 aa20.9■□□□□ 0.94
CCHCR1-222ENST00000507459 RGL3Q3MIN7 710 aa20.9■□□□□ 0.94
CCHCR1-222ENST00000507459 VGFO15240 615 aaPredicted RBP20.88■□□□□ 0.93
CCHCR1-222ENST00000507459 CHD2O14647 1828 aaKnown RBP20.88■□□□□ 0.93
CCHCR1-222ENST00000507459 RPGRIP1LQ68CZ1 1315 aa20.87■□□□□ 0.93
CCHCR1-222ENST00000507459 DIP2AQ14689 1571 aa20.87■□□□□ 0.93
CCHCR1-222ENST00000507459 NWD1Q149M9 1564 aa20.87■□□□□ 0.93
CCHCR1-222ENST00000507459 NKTRP30414 1462 aaKnown RBP20.87■□□□□ 0.93
CCHCR1-222ENST00000507459 XIRP1Q702N8 1843 aaKnown RBP20.86■□□□□ 0.93
CCHCR1-222ENST00000507459 HRCP23327 699 aa20.86■□□□□ 0.93
CCHCR1-222ENST00000507459 AMOTL2Q9Y2J4 779 aa20.86■□□□□ 0.93
CCHCR1-222ENST00000507459 SETBP1Q9Y6X0 1596 aa20.85■□□□□ 0.93
CCHCR1-222ENST00000507459 PIK3R4Q99570 1358 aa20.85■□□□□ 0.93
CCHCR1-222ENST00000507459 NRXN3Q9Y4C0 1643 aa20.84■□□□□ 0.93
CCHCR1-222ENST00000507459 ALKQ9UM73 1620 aa20.83■□□□□ 0.93
CCHCR1-222ENST00000507459 PTPRUQ92729 1446 aa20.82■□□□□ 0.92
CCHCR1-222ENST00000507459 C14orf37Q86TY3 774 aa20.82■□□□□ 0.92
CCHCR1-222ENST00000507459 METP08581 1390 aa20.82■□□□□ 0.92
CCHCR1-222ENST00000507459 SPATA31E1Q6ZUB1 1445 aa20.81■□□□□ 0.92
CCHCR1-222ENST00000507459 HSPA1LP34931 641 aa20.81■□□□□ 0.92
CCHCR1-222ENST00000507459 MSH6P52701 1360 aa20.8■□□□□ 0.92
CCHCR1-222ENST00000507459 PPLO60437 1756 aa20.8■□□□□ 0.92
CCHCR1-222ENST00000507459 ADGRF5Q8IZF2 1346 aa20.78■□□□□ 0.92
CCHCR1-222ENST00000507459 ANKRD30BQ9BXX2 1392 aa20.76■□□□□ 0.91
CCHCR1-222ENST00000507459 NCOA3Q9Y6Q9 1424 aa20.72■□□□□ 0.91
CCHCR1-222ENST00000507459 C19orf44Q9H6X5 657 aa20.72■□□□□ 0.91
CCHCR1-222ENST00000507459 XRN1Q8IZH2 1706 aaKnown RBP20.72■□□□□ 0.91
CCHCR1-222ENST00000507459 ATF3P18847 181 aa20.71■□□□□ 0.91
CCHCR1-222ENST00000507459 SLAIN2Q9P270 581 aa20.71■□□□□ 0.91
CCHCR1-222ENST00000507459 IFT172Q9UG01 1749 aa20.7■□□□□ 0.9
CCHCR1-222ENST00000507459 SETD1AO15047 1707 aaKnown RBP20.69■□□□□ 0.9
CCHCR1-222ENST00000507459 FAM135BQ49AJ0 1406 aa20.69■□□□□ 0.9
CCHCR1-222ENST00000507459 CADPS2Q86UW7 1296 aa20.68■□□□□ 0.9
CCHCR1-222ENST00000507459 TMEM132EQ6IEE7 984 aa20.67■□□□□ 0.9
CCHCR1-222ENST00000507459 STK26Q9P289 416 aa20.67■□□□□ 0.9
CCHCR1-222ENST00000507459 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.67■□□□□ 0.9
CCHCR1-222ENST00000507459 KDM2AQ9Y2K7 1162 aa20.66■□□□□ 0.9
CCHCR1-222ENST00000507459 PIK3C2GO75747 1445 aa20.65■□□□□ 0.9
CCHCR1-222ENST00000507459 ROBO2Q9HCK4 1378 aa20.65■□□□□ 0.9
CCHCR1-222ENST00000507459 ROBO1Q9Y6N7 1651 aa20.64■□□□□ 0.9
CCHCR1-222ENST00000507459 DCAF11Q8TEB1 546 aa20.64■□□□□ 0.89
CCHCR1-222ENST00000507459 DISP3Q9P2K9 1392 aa20.63■□□□□ 0.89
CCHCR1-222ENST00000507459 TRIM26Q12899 539 aaPredicted RBP20.63■□□□□ 0.89
CCHCR1-222ENST00000507459 CFAP70Q5T0N1 1121 aa20.63■□□□□ 0.89
CCHCR1-222ENST00000507459 C14orf93Q9H972 538 aaKnown RBP20.62■□□□□ 0.89
CCHCR1-222ENST00000507459 MYOM2P54296 1465 aa20.62■□□□□ 0.89
CCHCR1-222ENST00000507459 PTCH1Q13635 1447 aa20.61■□□□□ 0.89
CCHCR1-222ENST00000507459 ADGRL3Q9HAR2 1447 aa20.61■□□□□ 0.89
CCHCR1-222ENST00000507459 NRXN1Q9ULB1 1477 aa20.59■□□□□ 0.89
CCHCR1-222ENST00000507459 LRPPRCP42704 1394 aaKnown RBP20.59■□□□□ 0.89
CCHCR1-222ENST00000507459 WAPLQ7Z5K2 1190 aa20.58■□□□□ 0.89
CCHCR1-222ENST00000507459 DCCP43146 1447 aa20.58■□□□□ 0.88
CCHCR1-222ENST00000507459 ASXL1Q8IXJ9 1541 aa20.58■□□□□ 0.88
CCHCR1-222ENST00000507459 NALCNQ8IZF0 1738 aa20.57■□□□□ 0.88
CCHCR1-222ENST00000507459 YTHDC2Q9H6S0 1430 aaKnown RBP20.56■□□□□ 0.88
CCHCR1-222ENST00000507459 DHX57Q6P158 1386 aaKnown RBP20.56■□□□□ 0.88
CCHCR1-222ENST00000507459 PRAG1Q86YV5 1406 aa20.55■□□□□ 0.88
CCHCR1-222ENST00000507459 ABCC11Q96J66 1382 aa20.55■□□□□ 0.88
CCHCR1-222ENST00000507459 MST1RQ04912 1400 aa20.54■□□□□ 0.88
CCHCR1-222ENST00000507459 BRINP3Q76B58 766 aa20.54■□□□□ 0.88
CCHCR1-222ENST00000507459 STAC3Q96MF2 364 aa20.53■□□□□ 0.88
CCHCR1-222ENST00000507459 TECPR2O15040 1411 aa20.53■□□□□ 0.88
CCHCR1-222ENST00000507459 PLEKHH1Q9ULM0 1364 aa20.52■□□□□ 0.88
CCHCR1-222ENST00000507459 SIN3AQ96ST3 1273 aa20.52■□□□□ 0.88
CCHCR1-222ENST00000507459 PHLPP1O60346 1717 aa20.52■□□□□ 0.88
CCHCR1-222ENST00000507459 LAMC1P11047 1609 aa20.51■□□□□ 0.87
CCHCR1-222ENST00000507459 NEUROD1Q13562 356 aa20.5■□□□□ 0.87
CCHCR1-222ENST00000507459 MED1Q15648 1581 aaPredicted RBP20.5■□□□□ 0.87
CCHCR1-222ENST00000507459 SAFB2Q14151 953 aaKnown RBP eCLIP20.49■□□□□ 0.87
CCHCR1-222ENST00000507459 KNDC1Q76NI1 1749 aa20.49■□□□□ 0.87
CCHCR1-222ENST00000507459 TRAK1Q9UPV9 953 aa20.48■□□□□ 0.87
CCHCR1-222ENST00000507459 C1orf167Q5SNV9 1468 aa20.48■□□□□ 0.87
CCHCR1-222ENST00000507459 NUTM2FA1L443 756 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms