RNA–Protein interactions for RNA: ENST00000507282.1

LPCAT1-204, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 2

Gene LPCAT1, Length 417 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-204ENST00000507282 ZFYVE9O95405 1425 aa25.68■■□□□ 1.7
LPCAT1-204ENST00000507282 TRIM52Q96A61 297 aa25.67■■□□□ 1.7
LPCAT1-204ENST00000507282 SLC26A8Q96RN1 970 aa25.67■■□□□ 1.7
LPCAT1-204ENST00000507282 SCAF1Q9H7N4 1312 aaKnown RBP25.66■■□□□ 1.7
LPCAT1-204ENST00000507282 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.66■■□□□ 1.7
LPCAT1-204ENST00000507282 SPHKAPQ2M3C7 1700 aa25.66■■□□□ 1.7
LPCAT1-204ENST00000507282 PIP4K2BP78356 416 aa25.64■■□□□ 1.7
LPCAT1-204ENST00000507282 PLEKHG1Q9ULL1 1385 aa25.64■■□□□ 1.69
LPCAT1-204ENST00000507282 SENP3Q9H4L4 574 aaPredicted RBP25.62■■□□□ 1.69
LPCAT1-204ENST00000507282 KCNA6P17658 529 aa25.61■■□□□ 1.69
LPCAT1-204ENST00000507282 NUTM2DQ5VT03 806 aaPredicted RBP25.58■■□□□ 1.69
LPCAT1-204ENST00000507282 SLC4A1APQ9BWU0 796 aaKnown RBP25.57■■□□□ 1.68
LPCAT1-204ENST00000507282 TRPM2O94759 1503 aa25.55■■□□□ 1.68
LPCAT1-204ENST00000507282 ZNF326Q5BKZ1 582 aaKnown RBP25.54■■□□□ 1.68
LPCAT1-204ENST00000507282 PROSER2Q86WR7 435 aaPredicted RBP25.54■■□□□ 1.68
LPCAT1-204ENST00000507282 TBX22Q9Y458 520 aa25.54■■□□□ 1.68
LPCAT1-204ENST00000507282 NKTRP30414 1462 aaKnown RBP25.53■■□□□ 1.68
LPCAT1-204ENST00000507282 NWD1Q149M9 1564 aa25.52■■□□□ 1.68
LPCAT1-204ENST00000507282 ALKQ9UM73 1620 aa25.52■■□□□ 1.68
LPCAT1-204ENST00000507282 XIRP1Q702N8 1843 aaKnown RBP25.52■■□□□ 1.68
LPCAT1-204ENST00000507282 TMEM94Q12767 1356 aa25.52■■□□□ 1.68
LPCAT1-204ENST00000507282 CLTCL1P53675 1640 aa25.52■■□□□ 1.68
LPCAT1-204ENST00000507282 HSPA1LP34931 641 aa25.5■■□□□ 1.67
LPCAT1-204ENST00000507282 DIP2AQ14689 1571 aa25.49■■□□□ 1.67
LPCAT1-204ENST00000507282 ADAMTS13Q76LX8 1427 aa25.48■■□□□ 1.67
LPCAT1-204ENST00000507282 CHD2O14647 1828 aaKnown RBP25.48■■□□□ 1.67
LPCAT1-204ENST00000507282 KIF1BO60333 1816 aa25.47■■□□□ 1.67
LPCAT1-204ENST00000507282 DISP3Q9P2K9 1392 aa25.46■■□□□ 1.67
LPCAT1-204ENST00000507282 RBM33Q96EV2 1170 aaKnown RBP25.46■■□□□ 1.67
LPCAT1-204ENST00000507282 PIK3R4Q99570 1358 aa25.44■■□□□ 1.66
LPCAT1-204ENST00000507282 ACIN1Q9UKV3 1341 aaKnown RBP25.44■■□□□ 1.66
LPCAT1-204ENST00000507282 SETD5Q9C0A6 1442 aa25.41■■□□□ 1.66
LPCAT1-204ENST00000507282 MSH6P52701 1360 aa25.41■■□□□ 1.66
LPCAT1-204ENST00000507282 FOXD1Q16676 465 aa25.4■■□□□ 1.66
LPCAT1-204ENST00000507282 MPHOSPH9Q99550 1183 aa25.4■■□□□ 1.66
LPCAT1-204ENST00000507282 NEXMIFQ5QGS0 1516 aa25.4■■□□□ 1.66
LPCAT1-204ENST00000507282 SETBP1Q9Y6X0 1596 aa25.39■■□□□ 1.66
LPCAT1-204ENST00000507282 NRXN3Q9Y4C0 1643 aa25.37■■□□□ 1.65
LPCAT1-204ENST00000507282 C14orf37Q86TY3 774 aa25.36■■□□□ 1.65
LPCAT1-204ENST00000507282 AMOTL2Q9Y2J4 779 aa25.36■■□□□ 1.65
LPCAT1-204ENST00000507282 NCOA3Q9Y6Q9 1424 aa25.36■■□□□ 1.65
LPCAT1-204ENST00000507282 VGFO15240 615 aaPredicted RBP25.35■■□□□ 1.65
LPCAT1-204ENST00000507282 RPGRIP1LQ68CZ1 1315 aa25.35■■□□□ 1.65
LPCAT1-204ENST00000507282 CCDC144AA2RUR9 1427 aa25.34■■□□□ 1.65
LPCAT1-204ENST00000507282 FAM135BQ49AJ0 1406 aa25.34■■□□□ 1.65
LPCAT1-204ENST00000507282 PTPRUQ92729 1446 aa25.33■■□□□ 1.65
LPCAT1-204ENST00000507282 RAB3GAP2Q9H2M9 1393 aa25.31■■□□□ 1.64
LPCAT1-204ENST00000507282 METP08581 1390 aa25.3■■□□□ 1.64
LPCAT1-204ENST00000507282 SLAIN2Q9P270 581 aa25.29■■□□□ 1.64
LPCAT1-204ENST00000507282 C19orf44Q9H6X5 657 aa25.28■■□□□ 1.64
LPCAT1-204ENST00000507282 ROBO1Q9Y6N7 1651 aa25.27■■□□□ 1.64
LPCAT1-204ENST00000507282 XRN1Q8IZH2 1706 aaKnown RBP25.27■■□□□ 1.64
LPCAT1-204ENST00000507282 PPLO60437 1756 aa25.26■■□□□ 1.63
LPCAT1-204ENST00000507282 ATF3P18847 181 aa25.25■■□□□ 1.63
LPCAT1-204ENST00000507282 CADPS2Q86UW7 1296 aa25.25■■□□□ 1.63
LPCAT1-204ENST00000507282 RGL3Q3MIN7 710 aa25.24■■□□□ 1.63
LPCAT1-204ENST00000507282 MED1Q15648 1581 aaPredicted RBP25.23■■□□□ 1.63
LPCAT1-204ENST00000507282 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.23■■□□□ 1.63
LPCAT1-204ENST00000507282 SPATA31E1Q6ZUB1 1445 aa25.21■■□□□ 1.63
LPCAT1-204ENST00000507282 ILDR2Q71H61 639 aa25.2■■□□□ 1.62
LPCAT1-204ENST00000507282 ANKRD30BQ9BXX2 1392 aa25.18■■□□□ 1.62
LPCAT1-204ENST00000507282 SETD1AO15047 1707 aaKnown RBP25.17■■□□□ 1.62
LPCAT1-204ENST00000507282 DCCP43146 1447 aa25.17■■□□□ 1.62
LPCAT1-204ENST00000507282 HRCP23327 699 aa25.16■■□□□ 1.62
LPCAT1-204ENST00000507282 ADGRF5Q8IZF2 1346 aa25.15■■□□□ 1.62
LPCAT1-204ENST00000507282 PHF23Q9BUL5 403 aaPredicted RBP25.14■■□□□ 1.62
LPCAT1-204ENST00000507282 PTCH1Q13635 1447 aa25.13■■□□□ 1.61
LPCAT1-204ENST00000507282 IFT172Q9UG01 1749 aa25.13■■□□□ 1.61
LPCAT1-204ENST00000507282 ADGRL3Q9HAR2 1447 aa25.12■■□□□ 1.61
LPCAT1-204ENST00000507282 PHLPP1O60346 1717 aa25.12■■□□□ 1.61
LPCAT1-204ENST00000507282 ROBO2Q9HCK4 1378 aa25.09■■□□□ 1.61
LPCAT1-204ENST00000507282 PRAG1Q86YV5 1406 aa25.09■■□□□ 1.61
LPCAT1-204ENST00000507282 NALCNQ8IZF0 1738 aa25.08■■□□□ 1.61
LPCAT1-204ENST00000507282 PIK3C2GO75747 1445 aa25.06■■□□□ 1.6
LPCAT1-204ENST00000507282 MST1RQ04912 1400 aa25.06■■□□□ 1.6
LPCAT1-204ENST00000507282 BRINP3Q76B58 766 aa25.06■■□□□ 1.6
LPCAT1-204ENST00000507282 JCADQ9P266 1359 aa25.05■■□□□ 1.6
LPCAT1-204ENST00000507282 AHDC1Q5TGY3 1603 aaPredicted RBP25.04■■□□□ 1.6
LPCAT1-204ENST00000507282 COL16A1Q07092 1604 aaPredicted RBP25.04■■□□□ 1.6
LPCAT1-204ENST00000507282 STK26Q9P289 416 aa25.02■■□□□ 1.6
LPCAT1-204ENST00000507282 MYOM2P54296 1465 aa25.02■■□□□ 1.6
LPCAT1-204ENST00000507282 ASXL1Q8IXJ9 1541 aa25.02■■□□□ 1.6
LPCAT1-204ENST00000507282 SOCS7O14512 581 aa25.01■■□□□ 1.59
LPCAT1-204ENST00000507282 TMEM132EQ6IEE7 984 aa25.01■■□□□ 1.59
LPCAT1-204ENST00000507282 LRPPRCP42704 1394 aaKnown RBP25.01■■□□□ 1.59
LPCAT1-204ENST00000507282 NRXN1Q9ULB1 1477 aa24.99■■□□□ 1.59
LPCAT1-204ENST00000507282 TECPR2O15040 1411 aa24.98■■□□□ 1.59
LPCAT1-204ENST00000507282 C14orf93Q9H972 538 aaKnown RBP24.98■■□□□ 1.59
LPCAT1-204ENST00000507282 ABCC11Q96J66 1382 aa24.97■■□□□ 1.59
LPCAT1-204ENST00000507282 LAMC1P11047 1609 aa24.96■■□□□ 1.59
LPCAT1-204ENST00000507282 C1orf167Q5SNV9 1468 aa24.96■■□□□ 1.59
LPCAT1-204ENST00000507282 YTHDC2Q9H6S0 1430 aaKnown RBP24.95■■□□□ 1.59
LPCAT1-204ENST00000507282 CFAP70Q5T0N1 1121 aa24.95■■□□□ 1.58
LPCAT1-204ENST00000507282 KNDC1Q76NI1 1749 aa24.95■■□□□ 1.58
LPCAT1-204ENST00000507282 SPATA31A6Q5VVP1 1343 aa24.94■■□□□ 1.58
LPCAT1-204ENST00000507282 WAPLQ7Z5K2 1190 aa24.94■■□□□ 1.58
LPCAT1-204ENST00000507282 NHSL1Q5SYE7 1610 aa24.93■■□□□ 1.58
LPCAT1-204ENST00000507282 DHX57Q6P158 1386 aaKnown RBP24.93■■□□□ 1.58
LPCAT1-204ENST00000507282 DCAF11Q8TEB1 546 aa24.91■■□□□ 1.58
LPCAT1-204ENST00000507282 KDM2AQ9Y2K7 1162 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms