RNA–Protein interactions for RNA: ENST00000506951.5

PACRGL-217, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-217ENST00000506951 CHGAP10645 457 aaKnown RBP33.07■■■□□ 2.88
PACRGL-217ENST00000506951 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.07■■■□□ 2.88
PACRGL-217ENST00000506951 PLEKHG1Q9ULL1 1385 aa33.07■■■□□ 2.88
PACRGL-217ENST00000506951 BCANQ96GW7 911 aa33.06■■■□□ 2.88
PACRGL-217ENST00000506951 SCAF1Q9H7N4 1312 aaKnown RBP33.04■■■□□ 2.88
PACRGL-217ENST00000506951 SLC26A8Q96RN1 970 aa33.01■■■□□ 2.87
PACRGL-217ENST00000506951 NWD1Q149M9 1564 aa33■■■□□ 2.87
PACRGL-217ENST00000506951 KCNA6P17658 529 aa33■■■□□ 2.87
PACRGL-217ENST00000506951 PIP4K2BP78356 416 aa33■■■□□ 2.87
PACRGL-217ENST00000506951 XIRP1Q702N8 1843 aaKnown RBP33■■■□□ 2.87
PACRGL-217ENST00000506951 NKTRP30414 1462 aaKnown RBP32.99■■■□□ 2.87
PACRGL-217ENST00000506951 DIP2AQ14689 1571 aa32.98■■■□□ 2.87
PACRGL-217ENST00000506951 TRPM2O94759 1503 aa32.97■■■□□ 2.87
PACRGL-217ENST00000506951 ALKQ9UM73 1620 aa32.95■■■□□ 2.87
PACRGL-217ENST00000506951 TRIM52Q96A61 297 aa32.95■■■□□ 2.87
PACRGL-217ENST00000506951 CHD2O14647 1828 aaKnown RBP32.94■■■□□ 2.86
PACRGL-217ENST00000506951 KIF1BO60333 1816 aa32.92■■■□□ 2.86
PACRGL-217ENST00000506951 TBX22Q9Y458 520 aa32.9■■■□□ 2.86
PACRGL-217ENST00000506951 CLTCL1P53675 1640 aa32.9■■■□□ 2.86
PACRGL-217ENST00000506951 TMEM94Q12767 1356 aa32.89■■■□□ 2.86
PACRGL-217ENST00000506951 PROSER2Q86WR7 435 aaPredicted RBP32.88■■■□□ 2.85
PACRGL-217ENST00000506951 DISP3Q9P2K9 1392 aa32.87■■■□□ 2.85
PACRGL-217ENST00000506951 PIK3R4Q99570 1358 aa32.86■■■□□ 2.85
PACRGL-217ENST00000506951 HSPA1LP34931 641 aa32.85■■■□□ 2.85
PACRGL-217ENST00000506951 SLC4A1APQ9BWU0 796 aaKnown RBP32.85■■■□□ 2.85
PACRGL-217ENST00000506951 ADAMTS13Q76LX8 1427 aa32.85■■■□□ 2.85
PACRGL-217ENST00000506951 ACIN1Q9UKV3 1341 aaKnown RBP32.84■■■□□ 2.85
PACRGL-217ENST00000506951 ZNF326Q5BKZ1 582 aaKnown RBP32.84■■■□□ 2.85
PACRGL-217ENST00000506951 NUTM2DQ5VT03 806 aaPredicted RBP32.83■■■□□ 2.85
PACRGL-217ENST00000506951 SENP3Q9H4L4 574 aaPredicted RBP32.82■■■□□ 2.84
PACRGL-217ENST00000506951 SETBP1Q9Y6X0 1596 aa32.8■■■□□ 2.84
PACRGL-217ENST00000506951 MSH6P52701 1360 aa32.79■■■□□ 2.84
PACRGL-217ENST00000506951 NEXMIFQ5QGS0 1516 aa32.77■■■□□ 2.84
PACRGL-217ENST00000506951 NCOA3Q9Y6Q9 1424 aa32.77■■■□□ 2.84
PACRGL-217ENST00000506951 NRXN3Q9Y4C0 1643 aa32.74■■■□□ 2.83
PACRGL-217ENST00000506951 FAM135BQ49AJ0 1406 aa32.72■■■□□ 2.83
PACRGL-217ENST00000506951 RBM33Q96EV2 1170 aaKnown RBP32.68■■■□□ 2.82
PACRGL-217ENST00000506951 RPGRIP1LQ68CZ1 1315 aa32.67■■■□□ 2.82
PACRGL-217ENST00000506951 SETD5Q9C0A6 1442 aa32.67■■■□□ 2.82
PACRGL-217ENST00000506951 ROBO1Q9Y6N7 1651 aa32.66■■■□□ 2.82
PACRGL-217ENST00000506951 XRN1Q8IZH2 1706 aaKnown RBP32.66■■■□□ 2.82
PACRGL-217ENST00000506951 CCDC144AA2RUR9 1427 aa32.65■■■□□ 2.82
PACRGL-217ENST00000506951 MED1Q15648 1581 aaPredicted RBP32.65■■■□□ 2.82
PACRGL-217ENST00000506951 VGFO15240 615 aaPredicted RBP32.64■■■□□ 2.82
PACRGL-217ENST00000506951 C14orf37Q86TY3 774 aa32.64■■■□□ 2.82
PACRGL-217ENST00000506951 PPLO60437 1756 aa32.63■■■□□ 2.81
PACRGL-217ENST00000506951 AMOTL2Q9Y2J4 779 aa32.63■■■□□ 2.81
PACRGL-217ENST00000506951 MPHOSPH9Q99550 1183 aa32.62■■■□□ 2.81
PACRGL-217ENST00000506951 PTPRUQ92729 1446 aa32.6■■■□□ 2.81
PACRGL-217ENST00000506951 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.59■■■□□ 2.81
PACRGL-217ENST00000506951 SLAIN2Q9P270 581 aa32.58■■■□□ 2.81
PACRGL-217ENST00000506951 C19orf44Q9H6X5 657 aa32.57■■■□□ 2.8
PACRGL-217ENST00000506951 FOXD1Q16676 465 aa32.56■■■□□ 2.8
PACRGL-217ENST00000506951 CADPS2Q86UW7 1296 aa32.56■■■□□ 2.8
PACRGL-217ENST00000506951 METP08581 1390 aa32.56■■■□□ 2.8
PACRGL-217ENST00000506951 DCCP43146 1447 aa32.54■■■□□ 2.8
PACRGL-217ENST00000506951 ATF3P18847 181 aa32.54■■■□□ 2.8
PACRGL-217ENST00000506951 SETD1AO15047 1707 aaKnown RBP32.52■■■□□ 2.8
PACRGL-217ENST00000506951 RAB3GAP2Q9H2M9 1393 aa32.5■■■□□ 2.79
PACRGL-217ENST00000506951 PHLPP1O60346 1717 aa32.49■■■□□ 2.79
PACRGL-217ENST00000506951 IFT172Q9UG01 1749 aa32.48■■■□□ 2.79
PACRGL-217ENST00000506951 SPATA31E1Q6ZUB1 1445 aa32.47■■■□□ 2.79
PACRGL-217ENST00000506951 ILDR2Q71H61 639 aa32.47■■■□□ 2.79
PACRGL-217ENST00000506951 ANKRD30BQ9BXX2 1392 aa32.46■■■□□ 2.79
PACRGL-217ENST00000506951 PTCH1Q13635 1447 aa32.45■■■□□ 2.79
PACRGL-217ENST00000506951 PHF23Q9BUL5 403 aaPredicted RBP32.45■■■□□ 2.79
PACRGL-217ENST00000506951 PRAG1Q86YV5 1406 aa32.43■■■□□ 2.78
PACRGL-217ENST00000506951 ADGRL3Q9HAR2 1447 aa32.42■■■□□ 2.78
PACRGL-217ENST00000506951 NALCNQ8IZF0 1738 aa32.4■■■□□ 2.78
PACRGL-217ENST00000506951 RGL3Q3MIN7 710 aa32.39■■■□□ 2.78
PACRGL-217ENST00000506951 AHDC1Q5TGY3 1603 aaPredicted RBP32.38■■■□□ 2.77
PACRGL-217ENST00000506951 HRCP23327 699 aa32.37■■■□□ 2.77
PACRGL-217ENST00000506951 COL16A1Q07092 1604 aaPredicted RBP32.37■■■□□ 2.77
PACRGL-217ENST00000506951 JCADQ9P266 1359 aa32.33■■■□□ 2.77
PACRGL-217ENST00000506951 SOCS7O14512 581 aa32.33■■■□□ 2.77
PACRGL-217ENST00000506951 MST1RQ04912 1400 aa32.33■■■□□ 2.77
PACRGL-217ENST00000506951 ADGRF5Q8IZF2 1346 aa32.32■■■□□ 2.76
PACRGL-217ENST00000506951 PIK3C2GO75747 1445 aa32.31■■■□□ 2.76
PACRGL-217ENST00000506951 ASXL1Q8IXJ9 1541 aa32.3■■■□□ 2.76
PACRGL-217ENST00000506951 ROBO2Q9HCK4 1378 aa32.3■■■□□ 2.76
PACRGL-217ENST00000506951 LAMC1P11047 1609 aa32.29■■■□□ 2.76
PACRGL-217ENST00000506951 BRINP3Q76B58 766 aa32.28■■■□□ 2.76
PACRGL-217ENST00000506951 MYOM2P54296 1465 aa32.28■■■□□ 2.76
PACRGL-217ENST00000506951 KNDC1Q76NI1 1749 aa32.27■■■□□ 2.76
PACRGL-217ENST00000506951 NHSL1Q5SYE7 1610 aa32.26■■■□□ 2.75
PACRGL-217ENST00000506951 SHPRHQ149N8 1683 aa32.25■■■□□ 2.75
PACRGL-217ENST00000506951 TECPR2O15040 1411 aa32.24■■■□□ 2.75
PACRGL-217ENST00000506951 NRXN1Q9ULB1 1477 aa32.22■■■□□ 2.75
PACRGL-217ENST00000506951 LRPPRCP42704 1394 aaKnown RBP32.21■■■□□ 2.75
PACRGL-217ENST00000506951 SPATA31A6Q5VVP1 1343 aa32.21■■■□□ 2.75
PACRGL-217ENST00000506951 CDC42BPGQ6DT37 1551 aa32.19■■■□□ 2.74
PACRGL-217ENST00000506951 C1orf167Q5SNV9 1468 aa32.18■■■□□ 2.74
PACRGL-217ENST00000506951 ABCC11Q96J66 1382 aa32.18■■■□□ 2.74
PACRGL-217ENST00000506951 YTHDC2Q9H6S0 1430 aaKnown RBP32.14■■■□□ 2.74
PACRGL-217ENST00000506951 C14orf93Q9H972 538 aaKnown RBP32.13■■■□□ 2.73
PACRGL-217ENST00000506951 STK26Q9P289 416 aa32.13■■■□□ 2.73
PACRGL-217ENST00000506951 STAC3Q96MF2 364 aa32.11■■■□□ 2.73
PACRGL-217ENST00000506951 DHX57Q6P158 1386 aaKnown RBP32.1■■■□□ 2.73
PACRGL-217ENST00000506951 TMEM132EQ6IEE7 984 aa32.1■■■□□ 2.73
PACRGL-217ENST00000506951 LRRC59Q96AG4 307 aaKnown RBP32.1■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms