RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 MED14O60244 1454 aa20.37■□□□□ 0.85
SERF1B-204ENST00000506542 CLSPNQ9HAW4 1339 aa20.37■□□□□ 0.85
SERF1B-204ENST00000506542 TRPM2O94759 1503 aa20.35■□□□□ 0.85
SERF1B-204ENST00000506542 CERKQ8TCT0 537 aa20.35■□□□□ 0.85
SERF1B-204ENST00000506542 MPHOSPH9Q99550 1183 aa20.35■□□□□ 0.85
SERF1B-204ENST00000506542 STRCP1A6NGW2 1772 aa20.35■□□□□ 0.85
SERF1B-204ENST00000506542 ZFYVE9O95405 1425 aa20.33■□□□□ 0.85
SERF1B-204ENST00000506542 ILDR1Q86SU0 546 aaPredicted RBP20.32■□□□□ 0.84
SERF1B-204ENST00000506542 EID1Q9Y6B2 187 aa20.32■□□□□ 0.84
SERF1B-204ENST00000506542 RIMS2Q9UQ26 1411 aa20.32■□□□□ 0.84
SERF1B-204ENST00000506542 KIF1BO60333 1816 aa20.3■□□□□ 0.84
SERF1B-204ENST00000506542 SLC26A8Q96RN1 970 aa20.29■□□□□ 0.84
SERF1B-204ENST00000506542 ACIN1Q9UKV3 1341 aaKnown RBP20.28■□□□□ 0.84
SERF1B-204ENST00000506542 PPP1R15AO75807 674 aaPredicted RBP20.26■□□□□ 0.83
SERF1B-204ENST00000506542 ZNF326Q5BKZ1 582 aaKnown RBP20.26■□□□□ 0.83
SERF1B-204ENST00000506542 BCANQ96GW7 911 aa20.26■□□□□ 0.83
SERF1B-204ENST00000506542 NEXMIFQ5QGS0 1516 aa20.22■□□□□ 0.83
SERF1B-204ENST00000506542 PLEKHG1Q9ULL1 1385 aa20.21■□□□□ 0.83
SERF1B-204ENST00000506542 FBXO41Q8TF61 875 aa20.2■□□□□ 0.82
SERF1B-204ENST00000506542 RBM33Q96EV2 1170 aaKnown RBP20.19■□□□□ 0.82
SERF1B-204ENST00000506542 NRXN3Q9Y4C0 1643 aa20.19■□□□□ 0.82
SERF1B-204ENST00000506542 CCDC144AA2RUR9 1427 aa20.19■□□□□ 0.82
SERF1B-204ENST00000506542 ADAMTS13Q76LX8 1427 aa20.18■□□□□ 0.82
SERF1B-204ENST00000506542 XIRP1Q702N8 1843 aaKnown RBP20.18■□□□□ 0.82
SERF1B-204ENST00000506542 RGL3Q3MIN7 710 aa20.17■□□□□ 0.82
SERF1B-204ENST00000506542 CPS1P31327 1500 aa20.17■□□□□ 0.82
SERF1B-204ENST00000506542 PPLO60437 1756 aa20.17■□□□□ 0.82
SERF1B-204ENST00000506542 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.16■□□□□ 0.82
SERF1B-204ENST00000506542 LRRC7Q96NW7 1537 aa20.16■□□□□ 0.82
SERF1B-204ENST00000506542 HDGFP51858 240 aaKnown RBP20.14■□□□□ 0.81
SERF1B-204ENST00000506542 SPATA31E1Q6ZUB1 1445 aa20.14■□□□□ 0.81
SERF1B-204ENST00000506542 CHD2O14647 1828 aaKnown RBP20.14■□□□□ 0.81
SERF1B-204ENST00000506542 ANKRD30BQ9BXX2 1392 aa20.12■□□□□ 0.81
SERF1B-204ENST00000506542 IFT172Q9UG01 1749 aa20.11■□□□□ 0.81
SERF1B-204ENST00000506542 NWD1Q149M9 1564 aa20.1■□□□□ 0.81
SERF1B-204ENST00000506542 SETBP1Q9Y6X0 1596 aa20.1■□□□□ 0.81
SERF1B-204ENST00000506542 UBAP1LF5GYI3 381 aa20.1■□□□□ 0.81
SERF1B-204ENST00000506542 KCNA6P17658 529 aa20.1■□□□□ 0.81
SERF1B-204ENST00000506542 PTPRUQ92729 1446 aa20.09■□□□□ 0.81
SERF1B-204ENST00000506542 IQSEC2Q5JU85 1478 aa20.09■□□□□ 0.81
SERF1B-204ENST00000506542 ALKQ9UM73 1620 aa20.09■□□□□ 0.81
SERF1B-204ENST00000506542 METP08581 1390 aa20.08■□□□□ 0.81
SERF1B-204ENST00000506542 TBX22Q9Y458 520 aa20.08■□□□□ 0.81
SERF1B-204ENST00000506542 ADGRF5Q8IZF2 1346 aa20.08■□□□□ 0.8
SERF1B-204ENST00000506542 DIP2AQ14689 1571 aa20.07■□□□□ 0.8
SERF1B-204ENST00000506542 SETD1AO15047 1707 aaKnown RBP20.07■□□□□ 0.8
SERF1B-204ENST00000506542 TMEM94Q12767 1356 aa20.06■□□□□ 0.8
SERF1B-204ENST00000506542 PROSER2Q86WR7 435 aaPredicted RBP20.05■□□□□ 0.8
SERF1B-204ENST00000506542 SIN3AQ96ST3 1273 aa20.05■□□□□ 0.8
SERF1B-204ENST00000506542 PIP4K2BP78356 416 aa20.04■□□□□ 0.8
SERF1B-204ENST00000506542 VGFO15240 615 aaPredicted RBP20.03■□□□□ 0.8
SERF1B-204ENST00000506542 SCAF1Q9H7N4 1312 aaKnown RBP20.03■□□□□ 0.8
SERF1B-204ENST00000506542 RPGRIP1LQ68CZ1 1315 aa20.03■□□□□ 0.8
SERF1B-204ENST00000506542 AMOTL2Q9Y2J4 779 aa20.02■□□□□ 0.8
SERF1B-204ENST00000506542 XRN1Q8IZH2 1706 aaKnown RBP20.02■□□□□ 0.8
SERF1B-204ENST00000506542 NKTRP30414 1462 aaKnown RBP20.02■□□□□ 0.79
SERF1B-204ENST00000506542 TIMELESSQ9UNS1 1208 aa20■□□□□ 0.79
SERF1B-204ENST00000506542 NEUROD1Q13562 356 aa19.99■□□□□ 0.79
SERF1B-204ENST00000506542 KDM2AQ9Y2K7 1162 aa19.97■□□□□ 0.79
SERF1B-204ENST00000506542 PIK3R4Q99570 1358 aa19.96■□□□□ 0.79
SERF1B-204ENST00000506542 ASXL1Q8IXJ9 1541 aa19.96■□□□□ 0.79
SERF1B-204ENST00000506542 PIK3C2GO75747 1445 aa19.96■□□□□ 0.79
SERF1B-204ENST00000506542 TOM1O60784 492 aa19.95■□□□□ 0.78
SERF1B-204ENST00000506542 TMEM132EQ6IEE7 984 aa19.94■□□□□ 0.78
SERF1B-204ENST00000506542 DCAF11Q8TEB1 546 aa19.94■□□□□ 0.78
SERF1B-204ENST00000506542 C14orf37Q86TY3 774 aa19.93■□□□□ 0.78
SERF1B-204ENST00000506542 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.93■□□□□ 0.78
SERF1B-204ENST00000506542 TONSLQ96HA7 1378 aa19.93■□□□□ 0.78
SERF1B-204ENST00000506542 MYOM2P54296 1465 aa19.92■□□□□ 0.78
SERF1B-204ENST00000506542 NRXN1Q9ULB1 1477 aa19.92■□□□□ 0.78
SERF1B-204ENST00000506542 CFAP70Q5T0N1 1121 aa19.91■□□□□ 0.78
SERF1B-204ENST00000506542 STK26Q9P289 416 aa19.91■□□□□ 0.78
SERF1B-204ENST00000506542 ROBO2Q9HCK4 1378 aa19.91■□□□□ 0.78
SERF1B-204ENST00000506542 NALCNQ8IZF0 1738 aa19.9■□□□□ 0.78
SERF1B-204ENST00000506542 MSH6P52701 1360 aa19.89■□□□□ 0.77
SERF1B-204ENST00000506542 HSPA1LP34931 641 aa19.89■□□□□ 0.77
SERF1B-204ENST00000506542 ROBO1Q9Y6N7 1651 aa19.86■□□□□ 0.77
SERF1B-204ENST00000506542 C14orf93Q9H972 538 aaKnown RBP19.85■□□□□ 0.77
SERF1B-204ENST00000506542 WAPLQ7Z5K2 1190 aa19.84■□□□□ 0.77
SERF1B-204ENST00000506542 PLEKHH1Q9ULM0 1364 aa19.84■□□□□ 0.77
SERF1B-204ENST00000506542 PTCH1Q13635 1447 aa19.83■□□□□ 0.77
SERF1B-204ENST00000506542 C19orf44Q9H6X5 657 aa19.83■□□□□ 0.76
SERF1B-204ENST00000506542 LAMC1P11047 1609 aa19.83■□□□□ 0.76
SERF1B-204ENST00000506542 YTHDC2Q9H6S0 1430 aaKnown RBP19.83■□□□□ 0.76
SERF1B-204ENST00000506542 SLAIN2Q9P270 581 aa19.82■□□□□ 0.76
SERF1B-204ENST00000506542 LRPPRCP42704 1394 aaKnown RBP19.81■□□□□ 0.76
SERF1B-204ENST00000506542 ADGRB1O14514 1584 aa19.81■□□□□ 0.76
SERF1B-204ENST00000506542 KNDC1Q76NI1 1749 aa19.81■□□□□ 0.76
SERF1B-204ENST00000506542 ADGRL3Q9HAR2 1447 aa19.81■□□□□ 0.76
SERF1B-204ENST00000506542 NCOA3Q9Y6Q9 1424 aa19.81■□□□□ 0.76
SERF1B-204ENST00000506542 ATF3P18847 181 aa19.8■□□□□ 0.76
SERF1B-204ENST00000506542 L3MBTL2Q969R5 705 aa19.8■□□□□ 0.76
SERF1B-204ENST00000506542 PRAG1Q86YV5 1406 aa19.79■□□□□ 0.76
SERF1B-204ENST00000506542 SAFB2Q14151 953 aaKnown RBP eCLIP19.78■□□□□ 0.76
SERF1B-204ENST00000506542 TECPR2O15040 1411 aa19.78■□□□□ 0.76
SERF1B-204ENST00000506542 FAM135BQ49AJ0 1406 aa19.76■□□□□ 0.75
SERF1B-204ENST00000506542 ABCC11Q96J66 1382 aa19.76■□□□□ 0.75
SERF1B-204ENST00000506542 CADPS2Q86UW7 1296 aa19.76■□□□□ 0.75
SERF1B-204ENST00000506542 MST1RQ04912 1400 aa19.76■□□□□ 0.75
SERF1B-204ENST00000506542 TRAK1Q9UPV9 953 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms