RNA–Protein interactions for RNA: ENST00000505469.1

PPARGC1A-203, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 2

Gene PPARGC1A, Length 406 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-203ENST00000505469 CERKQ8TCT0 537 aa13.18□□□□□ -0.3
PPARGC1A-203ENST00000505469 NPHP4O75161 1426 aaPredicted RBP13.17□□□□□ -0.3
PPARGC1A-203ENST00000505469 STRCP1A6NGW2 1772 aa13.15□□□□□ -0.3
PPARGC1A-203ENST00000505469 TMEM2Q9UHN6 1383 aa13.15□□□□□ -0.3
PPARGC1A-203ENST00000505469 NCKAP5LQ9HCH0 1330 aa13.14□□□□□ -0.31
PPARGC1A-203ENST00000505469 CHD2O14647 1828 aaKnown RBP13.14□□□□□ -0.31
PPARGC1A-203ENST00000505469 NUP155O75694 1391 aa13.14□□□□□ -0.31
PPARGC1A-203ENST00000505469 TRPM2O94759 1503 aa13.13□□□□□ -0.31
PPARGC1A-203ENST00000505469 DIP2AQ14689 1571 aa13.13□□□□□ -0.31
PPARGC1A-203ENST00000505469 ILDR1Q86SU0 546 aaPredicted RBP13.13□□□□□ -0.31
PPARGC1A-203ENST00000505469 XIRP1Q702N8 1843 aaKnown RBP13.12□□□□□ -0.31
PPARGC1A-203ENST00000505469 IDI1Q13907 227 aa13.11□□□□□ -0.31
PPARGC1A-203ENST00000505469 EID1Q9Y6B2 187 aa13.11□□□□□ -0.31
PPARGC1A-203ENST00000505469 ZFYVE9O95405 1425 aa13.11□□□□□ -0.31
PPARGC1A-203ENST00000505469 NWD1Q149M9 1564 aa13.11□□□□□ -0.31
PPARGC1A-203ENST00000505469 SLC4A2P04920 1241 aa13.1□□□□□ -0.31
PPARGC1A-203ENST00000505469 HDGFP51858 240 aaKnown RBP13.09□□□□□ -0.31
PPARGC1A-203ENST00000505469 U3KPZ7 1027 aaPredicted RBP13.09□□□□□ -0.31
PPARGC1A-203ENST00000505469 PPARGC1BQ86YN6 1023 aaKnown RBP13.08□□□□□ -0.32
PPARGC1A-203ENST00000505469 STAG3Q9UJ98 1225 aa13.08□□□□□ -0.32
PPARGC1A-203ENST00000505469 CLTCL1P53675 1640 aa13.07□□□□□ -0.32
PPARGC1A-203ENST00000505469 ITGAEP38570 1179 aa13.07□□□□□ -0.32
PPARGC1A-203ENST00000505469 NKTRP30414 1462 aaKnown RBP13.07□□□□□ -0.32
PPARGC1A-203ENST00000505469 ZNF335Q9H4Z2 1342 aaPredicted RBP13.07□□□□□ -0.32
PPARGC1A-203ENST00000505469 PPLO60437 1756 aa13.06□□□□□ -0.32
PPARGC1A-203ENST00000505469 PLEKHG1Q9ULL1 1385 aa13.06□□□□□ -0.32
PPARGC1A-203ENST00000505469 TXNDC2Q86VQ3 553 aa13.05□□□□□ -0.32
PPARGC1A-203ENST00000505469 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.05□□□□□ -0.32
PPARGC1A-203ENST00000505469 SETBP1Q9Y6X0 1596 aa13.05□□□□□ -0.32
PPARGC1A-203ENST00000505469 LTKP29376 864 aa13.04□□□□□ -0.32
PPARGC1A-203ENST00000505469 IFT172Q9UG01 1749 aa13.04□□□□□ -0.32
PPARGC1A-203ENST00000505469 PIK3R4Q99570 1358 aa13.04□□□□□ -0.32
PPARGC1A-203ENST00000505469 RIMS2Q9UQ26 1411 aa13.04□□□□□ -0.32
PPARGC1A-203ENST00000505469 LRRC7Q96NW7 1537 aa13.03□□□□□ -0.32
PPARGC1A-203ENST00000505469 NRXN3Q9Y4C0 1643 aa13.02□□□□□ -0.33
PPARGC1A-203ENST00000505469 NEXMIFQ5QGS0 1516 aa13.01□□□□□ -0.33
PPARGC1A-203ENST00000505469 SETD1AO15047 1707 aaKnown RBP13□□□□□ -0.33
PPARGC1A-203ENST00000505469 SETD5Q9C0A6 1442 aa13□□□□□ -0.33
PPARGC1A-203ENST00000505469 NCOA3Q9Y6Q9 1424 aa13□□□□□ -0.33
PPARGC1A-203ENST00000505469 XRN1Q8IZH2 1706 aaKnown RBP12.99□□□□□ -0.33
PPARGC1A-203ENST00000505469 HRCP23327 699 aa12.99□□□□□ -0.33
PPARGC1A-203ENST00000505469 ALKQ9UM73 1620 aa12.98□□□□□ -0.33
PPARGC1A-203ENST00000505469 SLC4A1APQ9BWU0 796 aaKnown RBP12.97□□□□□ -0.33
PPARGC1A-203ENST00000505469 TBX22Q9Y458 520 aa12.97□□□□□ -0.33
PPARGC1A-203ENST00000505469 ADAMTS13Q76LX8 1427 aa12.96□□□□□ -0.33
PPARGC1A-203ENST00000505469 RPGRIP1LQ68CZ1 1315 aa12.96□□□□□ -0.33
PPARGC1A-203ENST00000505469 TOM1O60784 492 aa12.96□□□□□ -0.33
PPARGC1A-203ENST00000505469 KCNA6P17658 529 aa12.96□□□□□ -0.33
PPARGC1A-203ENST00000505469 PPP1R15AO75807 674 aaPredicted RBP12.95□□□□□ -0.34
PPARGC1A-203ENST00000505469 PRAG1Q86YV5 1406 aa12.95□□□□□ -0.34
PPARGC1A-203ENST00000505469 LAMC1P11047 1609 aa12.95□□□□□ -0.34
PPARGC1A-203ENST00000505469 TRIM52Q96A61 297 aa12.94□□□□□ -0.34
PPARGC1A-203ENST00000505469 CCDC144AA2RUR9 1427 aa12.94□□□□□ -0.34
PPARGC1A-203ENST00000505469 UBAP1LF5GYI3 381 aa12.92□□□□□ -0.34
PPARGC1A-203ENST00000505469 KNDC1Q76NI1 1749 aa12.92□□□□□ -0.34
PPARGC1A-203ENST00000505469 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.91□□□□□ -0.34
PPARGC1A-203ENST00000505469 RAB3GAP2Q9H2M9 1393 aa12.91□□□□□ -0.34
PPARGC1A-203ENST00000505469 DCCP43146 1447 aa12.9□□□□□ -0.34
PPARGC1A-203ENST00000505469 SPATA31E1Q6ZUB1 1445 aa12.9□□□□□ -0.34
PPARGC1A-203ENST00000505469 CHGAP10645 457 aaKnown RBP12.9□□□□□ -0.34
PPARGC1A-203ENST00000505469 MPHOSPH9Q99550 1183 aa12.9□□□□□ -0.34
PPARGC1A-203ENST00000505469 VGFO15240 615 aaPredicted RBP12.89□□□□□ -0.35
PPARGC1A-203ENST00000505469 ANKRD30BQ9BXX2 1392 aa12.89□□□□□ -0.35
PPARGC1A-203ENST00000505469 SLC26A8Q96RN1 970 aa12.88□□□□□ -0.35
PPARGC1A-203ENST00000505469 TMEM94Q12767 1356 aa12.88□□□□□ -0.35
PPARGC1A-203ENST00000505469 ROBO1Q9Y6N7 1651 aa12.88□□□□□ -0.35
PPARGC1A-203ENST00000505469 PTCH1Q13635 1447 aa12.88□□□□□ -0.35
PPARGC1A-203ENST00000505469 FAM135BQ49AJ0 1406 aa12.88□□□□□ -0.35
PPARGC1A-203ENST00000505469 MSH6P52701 1360 aa12.87□□□□□ -0.35
PPARGC1A-203ENST00000505469 ZNF326Q5BKZ1 582 aaKnown RBP12.87□□□□□ -0.35
PPARGC1A-203ENST00000505469 SPINK5Q9NQ38 1064 aaPredicted RBP12.87□□□□□ -0.35
PPARGC1A-203ENST00000505469 MYOM2P54296 1465 aa12.86□□□□□ -0.35
PPARGC1A-203ENST00000505469 NALCNQ8IZF0 1738 aa12.86□□□□□ -0.35
PPARGC1A-203ENST00000505469 BCANQ96GW7 911 aa12.85□□□□□ -0.35
PPARGC1A-203ENST00000505469 STAC3Q96MF2 364 aa12.85□□□□□ -0.35
PPARGC1A-203ENST00000505469 NRXN1Q9ULB1 1477 aa12.85□□□□□ -0.35
PPARGC1A-203ENST00000505469 CAPN15O75808 1086 aa12.84□□□□□ -0.35
PPARGC1A-203ENST00000505469 PROSER2Q86WR7 435 aaPredicted RBP12.84□□□□□ -0.35
PPARGC1A-203ENST00000505469 PHLPP1O60346 1717 aa12.82□□□□□ -0.36
PPARGC1A-203ENST00000505469 KIAA1210Q9ULL0 1709 aa12.82□□□□□ -0.36
PPARGC1A-203ENST00000505469 TECPR2O15040 1411 aa12.82□□□□□ -0.36
PPARGC1A-203ENST00000505469 PIK3C2GO75747 1445 aa12.82□□□□□ -0.36
PPARGC1A-203ENST00000505469 PTPRUQ92729 1446 aa12.82□□□□□ -0.36
PPARGC1A-203ENST00000505469 NHSL1Q5SYE7 1610 aa12.81□□□□□ -0.36
PPARGC1A-203ENST00000505469 AHDC1Q5TGY3 1603 aaPredicted RBP12.81□□□□□ -0.36
PPARGC1A-203ENST00000505469 ADGRL3Q9HAR2 1447 aa12.8□□□□□ -0.36
PPARGC1A-203ENST00000505469 CADPS2Q86UW7 1296 aa12.8□□□□□ -0.36
PPARGC1A-203ENST00000505469 C19orf44Q9H6X5 657 aa12.8□□□□□ -0.36
PPARGC1A-203ENST00000505469 AMOTL2Q9Y2J4 779 aa12.8□□□□□ -0.36
PPARGC1A-203ENST00000505469 CDC42BPGQ6DT37 1551 aa12.8□□□□□ -0.36
PPARGC1A-203ENST00000505469 METP08581 1390 aa12.8□□□□□ -0.36
PPARGC1A-203ENST00000505469 SHPRHQ149N8 1683 aa12.8□□□□□ -0.36
PPARGC1A-203ENST00000505469 COL16A1Q07092 1604 aaPredicted RBP12.78□□□□□ -0.36
PPARGC1A-203ENST00000505469 MED1Q15648 1581 aaPredicted RBP12.77□□□□□ -0.36
PPARGC1A-203ENST00000505469 NUTM2DQ5VT03 806 aaPredicted RBP12.77□□□□□ -0.37
PPARGC1A-203ENST00000505469 PIP4K2BP78356 416 aa12.76□□□□□ -0.37
PPARGC1A-203ENST00000505469 ASXL1Q8IXJ9 1541 aa12.76□□□□□ -0.37
PPARGC1A-203ENST00000505469 DLC1Q96QB1 1528 aa12.76□□□□□ -0.37
PPARGC1A-203ENST00000505469 HSPA1LP34931 641 aa12.75□□□□□ -0.37
PPARGC1A-203ENST00000505469 SLAIN2Q9P270 581 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms