RNA–Protein interactions for RNA: ENST00000504045.5

MATR3-208, Transcript of matrin 3, humanhuman

TSL 5

Gene MATR3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-208ENST00000504045 SENP3Q9H4L4 574 aaPredicted RBP25.4■■□□□ 1.66
MATR3-208ENST00000504045 KIF1BO60333 1816 aa25.39■■□□□ 1.66
MATR3-208ENST00000504045 LRRC7Q96NW7 1537 aa25.38■■□□□ 1.65
MATR3-208ENST00000504045 SLC26A8Q96RN1 970 aa25.37■■□□□ 1.65
MATR3-208ENST00000504045 NUTM2DQ5VT03 806 aaPredicted RBP25.36■■□□□ 1.65
MATR3-208ENST00000504045 UBAP1LF5GYI3 381 aa25.35■■□□□ 1.65
MATR3-208ENST00000504045 PLEKHG1Q9ULL1 1385 aa25.34■■□□□ 1.65
MATR3-208ENST00000504045 SLC4A1APQ9BWU0 796 aaKnown RBP25.34■■□□□ 1.65
MATR3-208ENST00000504045 CHD2O14647 1828 aaKnown RBP25.33■■□□□ 1.64
MATR3-208ENST00000504045 PPP1R15AO75807 674 aaPredicted RBP25.32■■□□□ 1.64
MATR3-208ENST00000504045 ALKQ9UM73 1620 aa25.32■■□□□ 1.64
MATR3-208ENST00000504045 BCANQ96GW7 911 aa25.31■■□□□ 1.64
MATR3-208ENST00000504045 NWD1Q149M9 1564 aa25.31■■□□□ 1.64
MATR3-208ENST00000504045 SETD5Q9C0A6 1442 aa25.28■■□□□ 1.64
MATR3-208ENST00000504045 HDGFP51858 240 aaKnown RBP25.28■■□□□ 1.64
MATR3-208ENST00000504045 FOXD1Q16676 465 aa25.28■■□□□ 1.64
MATR3-208ENST00000504045 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.28■■□□□ 1.64
MATR3-208ENST00000504045 NRXN3Q9Y4C0 1643 aa25.28■■□□□ 1.64
MATR3-208ENST00000504045 ADAMTS13Q76LX8 1427 aa25.27■■□□□ 1.64
MATR3-208ENST00000504045 NEXMIFQ5QGS0 1516 aa25.26■■□□□ 1.63
MATR3-208ENST00000504045 KCNA6P17658 529 aa25.25■■□□□ 1.63
MATR3-208ENST00000504045 ZNF326Q5BKZ1 582 aaKnown RBP25.24■■□□□ 1.63
MATR3-208ENST00000504045 DIP2AQ14689 1571 aa25.23■■□□□ 1.63
MATR3-208ENST00000504045 RAB3GAP2Q9H2M9 1393 aa25.23■■□□□ 1.63
MATR3-208ENST00000504045 MPHOSPH9Q99550 1183 aa25.22■■□□□ 1.63
MATR3-208ENST00000504045 TOM1O60784 492 aa25.22■■□□□ 1.63
MATR3-208ENST00000504045 NKTRP30414 1462 aaKnown RBP25.21■■□□□ 1.63
MATR3-208ENST00000504045 PIP4K2BP78356 416 aa25.21■■□□□ 1.63
MATR3-208ENST00000504045 PPLO60437 1756 aa25.2■■□□□ 1.62
MATR3-208ENST00000504045 TBX22Q9Y458 520 aa25.2■■□□□ 1.62
MATR3-208ENST00000504045 SETBP1Q9Y6X0 1596 aa25.2■■□□□ 1.62
MATR3-208ENST00000504045 TMEM94Q12767 1356 aa25.2■■□□□ 1.62
MATR3-208ENST00000504045 RBM33Q96EV2 1170 aaKnown RBP25.19■■□□□ 1.62
MATR3-208ENST00000504045 SCAF1Q9H7N4 1312 aaKnown RBP25.19■■□□□ 1.62
MATR3-208ENST00000504045 PROSER2Q86WR7 435 aaPredicted RBP25.15■■□□□ 1.62
MATR3-208ENST00000504045 PTPRUQ92729 1446 aa25.13■■□□□ 1.61
MATR3-208ENST00000504045 SETD1AO15047 1707 aaKnown RBP25.13■■□□□ 1.61
MATR3-208ENST00000504045 XRN1Q8IZH2 1706 aaKnown RBP25.12■■□□□ 1.61
MATR3-208ENST00000504045 IFT172Q9UG01 1749 aa25.12■■□□□ 1.61
MATR3-208ENST00000504045 CCDC144AA2RUR9 1427 aa25.12■■□□□ 1.61
MATR3-208ENST00000504045 PIK3R4Q99570 1358 aa25.11■■□□□ 1.61
MATR3-208ENST00000504045 HSPA1LP34931 641 aa25.09■■□□□ 1.61
MATR3-208ENST00000504045 ACIN1Q9UKV3 1341 aaKnown RBP25.08■■□□□ 1.61
MATR3-208ENST00000504045 SPATA31E1Q6ZUB1 1445 aa25.07■■□□□ 1.6
MATR3-208ENST00000504045 METP08581 1390 aa25.07■■□□□ 1.6
MATR3-208ENST00000504045 AMOTL2Q9Y2J4 779 aa25.05■■□□□ 1.6
MATR3-208ENST00000504045 RPGRIP1LQ68CZ1 1315 aa25.04■■□□□ 1.6
MATR3-208ENST00000504045 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.04■■□□□ 1.6
MATR3-208ENST00000504045 ROBO1Q9Y6N7 1651 aa25.02■■□□□ 1.6
MATR3-208ENST00000504045 VGFO15240 615 aaPredicted RBP25.02■■□□□ 1.6
MATR3-208ENST00000504045 RGL3Q3MIN7 710 aa25.02■■□□□ 1.6
MATR3-208ENST00000504045 MSH6P52701 1360 aa25.02■■□□□ 1.6
MATR3-208ENST00000504045 NCOA3Q9Y6Q9 1424 aa24.98■■□□□ 1.59
MATR3-208ENST00000504045 HRCP23327 699 aa24.97■■□□□ 1.59
MATR3-208ENST00000504045 ADGRF5Q8IZF2 1346 aa24.96■■□□□ 1.59
MATR3-208ENST00000504045 C14orf37Q86TY3 774 aa24.96■■□□□ 1.59
MATR3-208ENST00000504045 FAM135BQ49AJ0 1406 aa24.96■■□□□ 1.59
MATR3-208ENST00000504045 NALCNQ8IZF0 1738 aa24.95■■□□□ 1.59
MATR3-208ENST00000504045 ANKRD30BQ9BXX2 1392 aa24.95■■□□□ 1.58
MATR3-208ENST00000504045 DISP3Q9P2K9 1392 aa24.91■■□□□ 1.58
MATR3-208ENST00000504045 C19orf44Q9H6X5 657 aa24.9■■□□□ 1.58
MATR3-208ENST00000504045 SLAIN2Q9P270 581 aa24.9■■□□□ 1.58
MATR3-208ENST00000504045 ASXL1Q8IXJ9 1541 aa24.89■■□□□ 1.58
MATR3-208ENST00000504045 PIK3C2GO75747 1445 aa24.89■■□□□ 1.57
MATR3-208ENST00000504045 MED1Q15648 1581 aaPredicted RBP24.88■■□□□ 1.57
MATR3-208ENST00000504045 PHLPP1O60346 1717 aa24.87■■□□□ 1.57
MATR3-208ENST00000504045 PTCH1Q13635 1447 aa24.87■■□□□ 1.57
MATR3-208ENST00000504045 ROBO2Q9HCK4 1378 aa24.86■■□□□ 1.57
MATR3-208ENST00000504045 PRAG1Q86YV5 1406 aa24.86■■□□□ 1.57
MATR3-208ENST00000504045 ADGRL3Q9HAR2 1447 aa24.85■■□□□ 1.57
MATR3-208ENST00000504045 CADPS2Q86UW7 1296 aa24.85■■□□□ 1.57
MATR3-208ENST00000504045 MYOM2P54296 1465 aa24.85■■□□□ 1.57
MATR3-208ENST00000504045 NRXN1Q9ULB1 1477 aa24.85■■□□□ 1.57
MATR3-208ENST00000504045 DCCP43146 1447 aa24.84■■□□□ 1.57
MATR3-208ENST00000504045 ATF3P18847 181 aa24.84■■□□□ 1.57
MATR3-208ENST00000504045 KNDC1Q76NI1 1749 aa24.84■■□□□ 1.57
MATR3-208ENST00000504045 LAMC1P11047 1609 aa24.81■■□□□ 1.56
MATR3-208ENST00000504045 MST1RQ04912 1400 aa24.8■■□□□ 1.56
MATR3-208ENST00000504045 COL16A1Q07092 1604 aaPredicted RBP24.8■■□□□ 1.56
MATR3-208ENST00000504045 TMEM132EQ6IEE7 984 aa24.79■■□□□ 1.56
MATR3-208ENST00000504045 TECPR2O15040 1411 aa24.77■■□□□ 1.56
MATR3-208ENST00000504045 STK26Q9P289 416 aa24.76■■□□□ 1.55
MATR3-208ENST00000504045 AHDC1Q5TGY3 1603 aaPredicted RBP24.76■■□□□ 1.55
MATR3-208ENST00000504045 LRPPRCP42704 1394 aaKnown RBP24.76■■□□□ 1.55
MATR3-208ENST00000504045 CFAP70Q5T0N1 1121 aa24.75■■□□□ 1.55
MATR3-208ENST00000504045 C14orf93Q9H972 538 aaKnown RBP24.75■■□□□ 1.55
MATR3-208ENST00000504045 NHSL1Q5SYE7 1610 aa24.74■■□□□ 1.55
MATR3-208ENST00000504045 ILDR2Q71H61 639 aa24.74■■□□□ 1.55
MATR3-208ENST00000504045 BRINP3Q76B58 766 aa24.74■■□□□ 1.55
MATR3-208ENST00000504045 YTHDC2Q9H6S0 1430 aaKnown RBP24.74■■□□□ 1.55
MATR3-208ENST00000504045 DHX57Q6P158 1386 aaKnown RBP24.73■■□□□ 1.55
MATR3-208ENST00000504045 ABCC11Q96J66 1382 aa24.72■■□□□ 1.55
MATR3-208ENST00000504045 DCAF11Q8TEB1 546 aa24.71■■□□□ 1.55
MATR3-208ENST00000504045 KDM2AQ9Y2K7 1162 aa24.71■■□□□ 1.55
MATR3-208ENST00000504045 PLEKHH1Q9ULM0 1364 aa24.71■■□□□ 1.55
MATR3-208ENST00000504045 WAPLQ7Z5K2 1190 aa24.71■■□□□ 1.55
MATR3-208ENST00000504045 CDC42BPGQ6DT37 1551 aa24.7■■□□□ 1.54
MATR3-208ENST00000504045 ADGRB1O14514 1584 aa24.69■■□□□ 1.54
MATR3-208ENST00000504045 C1orf167Q5SNV9 1468 aa24.69■■□□□ 1.54
MATR3-208ENST00000504045 SHPRHQ149N8 1683 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms