RNA–Protein interactions for RNA: ENST00000498219.5

HPS1-214, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 845 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-214ENST00000498219 TRPM2O94759 1503 aa21.94■■□□□ 1.1
HPS1-214ENST00000498219 STRCP1A6NGW2 1772 aa21.94■■□□□ 1.1
HPS1-214ENST00000498219 ZFYVE9O95405 1425 aa21.93■■□□□ 1.1
HPS1-214ENST00000498219 MPHOSPH9Q99550 1183 aa21.92■■□□□ 1.1
HPS1-214ENST00000498219 KIF1BO60333 1816 aa21.91■■□□□ 1.1
HPS1-214ENST00000498219 BCANQ96GW7 911 aa21.9■■□□□ 1.1
HPS1-214ENST00000498219 PPP1R15AO75807 674 aaPredicted RBP21.89■■□□□ 1.09
HPS1-214ENST00000498219 SLC26A8Q96RN1 970 aa21.89■■□□□ 1.09
HPS1-214ENST00000498219 ZNF326Q5BKZ1 582 aaKnown RBP21.87■■□□□ 1.09
HPS1-214ENST00000498219 TRIM26Q12899 539 aaPredicted RBP21.85■■□□□ 1.09
HPS1-214ENST00000498219 CPS1P31327 1500 aa21.85■■□□□ 1.09
HPS1-214ENST00000498219 HDGFP51858 240 aaKnown RBP21.84■■□□□ 1.09
HPS1-214ENST00000498219 PLEKHG1Q9ULL1 1385 aa21.84■■□□□ 1.09
HPS1-214ENST00000498219 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.83■■□□□ 1.09
HPS1-214ENST00000498219 IQSEC2Q5JU85 1478 aa21.82■■□□□ 1.08
HPS1-214ENST00000498219 NEXMIFQ5QGS0 1516 aa21.8■■□□□ 1.08
HPS1-214ENST00000498219 LRRC7Q96NW7 1537 aa21.79■■□□□ 1.08
HPS1-214ENST00000498219 XIRP1Q702N8 1843 aaKnown RBP21.77■■□□□ 1.08
HPS1-214ENST00000498219 CCDC144AA2RUR9 1427 aa21.77■■□□□ 1.08
HPS1-214ENST00000498219 ADAMTS13Q76LX8 1427 aa21.77■■□□□ 1.08
HPS1-214ENST00000498219 ACIN1Q9UKV3 1341 aaKnown RBP21.77■■□□□ 1.07
HPS1-214ENST00000498219 UBAP1LF5GYI3 381 aa21.76■■□□□ 1.07
HPS1-214ENST00000498219 NRXN3Q9Y4C0 1643 aa21.76■■□□□ 1.07
HPS1-214ENST00000498219 CHD2O14647 1828 aaKnown RBP21.76■■□□□ 1.07
HPS1-214ENST00000498219 KCNA6P17658 529 aa21.75■■□□□ 1.07
HPS1-214ENST00000498219 PPLO60437 1756 aa21.74■■□□□ 1.07
HPS1-214ENST00000498219 RBM33Q96EV2 1170 aaKnown RBP21.73■■□□□ 1.07
HPS1-214ENST00000498219 RGL3Q3MIN7 710 aa21.72■■□□□ 1.07
HPS1-214ENST00000498219 TBX22Q9Y458 520 aa21.72■■□□□ 1.07
HPS1-214ENST00000498219 NWD1Q149M9 1564 aa21.72■■□□□ 1.07
HPS1-214ENST00000498219 HRCP23327 699 aa21.71■■□□□ 1.07
HPS1-214ENST00000498219 DIP2AQ14689 1571 aa21.7■■□□□ 1.06
HPS1-214ENST00000498219 SETBP1Q9Y6X0 1596 aa21.7■■□□□ 1.06
HPS1-214ENST00000498219 PROSER2Q86WR7 435 aaPredicted RBP21.69■■□□□ 1.06
HPS1-214ENST00000498219 SPATA31E1Q6ZUB1 1445 aa21.69■■□□□ 1.06
HPS1-214ENST00000498219 ALKQ9UM73 1620 aa21.67■■□□□ 1.06
HPS1-214ENST00000498219 TMEM94Q12767 1356 aa21.67■■□□□ 1.06
HPS1-214ENST00000498219 IFT172Q9UG01 1749 aa21.66■■□□□ 1.06
HPS1-214ENST00000498219 PTPRUQ92729 1446 aa21.66■■□□□ 1.06
HPS1-214ENST00000498219 ANKRD30BQ9BXX2 1392 aa21.66■■□□□ 1.06
HPS1-214ENST00000498219 RPGRIP1LQ68CZ1 1315 aa21.66■■□□□ 1.06
HPS1-214ENST00000498219 SCAF1Q9H7N4 1312 aaKnown RBP21.66■■□□□ 1.06
HPS1-214ENST00000498219 PIP4K2BP78356 416 aa21.66■■□□□ 1.06
HPS1-214ENST00000498219 NKTRP30414 1462 aaKnown RBP21.65■■□□□ 1.06
HPS1-214ENST00000498219 VGFO15240 615 aaPredicted RBP21.64■■□□□ 1.05
HPS1-214ENST00000498219 METP08581 1390 aa21.63■■□□□ 1.05
HPS1-214ENST00000498219 TOM1O60784 492 aa21.63■■□□□ 1.05
HPS1-214ENST00000498219 PCGF6Q9BYE7 350 aa21.63■■□□□ 1.05
HPS1-214ENST00000498219 SETD1AO15047 1707 aaKnown RBP21.63■■□□□ 1.05
HPS1-214ENST00000498219 ADGRF5Q8IZF2 1346 aa21.62■■□□□ 1.05
HPS1-214ENST00000498219 AMOTL2Q9Y2J4 779 aa21.62■■□□□ 1.05
HPS1-214ENST00000498219 PIK3R4Q99570 1358 aa21.61■■□□□ 1.05
HPS1-214ENST00000498219 XRN1Q8IZH2 1706 aaKnown RBP21.6■■□□□ 1.05
HPS1-214ENST00000498219 C14orf37Q86TY3 774 aa21.54■■□□□ 1.04
HPS1-214ENST00000498219 MSH6P52701 1360 aa21.52■■□□□ 1.04
HPS1-214ENST00000498219 HSPA1LP34931 641 aa21.51■■□□□ 1.03
HPS1-214ENST00000498219 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.51■■□□□ 1.03
HPS1-214ENST00000498219 PIK3C2GO75747 1445 aa21.5■■□□□ 1.03
HPS1-214ENST00000498219 KDM2AQ9Y2K7 1162 aa21.5■■□□□ 1.03
HPS1-214ENST00000498219 ASXL1Q8IXJ9 1541 aa21.49■■□□□ 1.03
HPS1-214ENST00000498219 MYOM2P54296 1465 aa21.48■■□□□ 1.03
HPS1-214ENST00000498219 TMEM132EQ6IEE7 984 aa21.48■■□□□ 1.03
HPS1-214ENST00000498219 DCAF11Q8TEB1 546 aa21.47■■□□□ 1.03
HPS1-214ENST00000498219 NCOA3Q9Y6Q9 1424 aa21.46■■□□□ 1.03
HPS1-214ENST00000498219 NRXN1Q9ULB1 1477 aa21.46■■□□□ 1.03
HPS1-214ENST00000498219 STK26Q9P289 416 aa21.46■■□□□ 1.03
HPS1-214ENST00000498219 ROBO1Q9Y6N7 1651 aa21.46■■□□□ 1.03
HPS1-214ENST00000498219 ROBO2Q9HCK4 1378 aa21.46■■□□□ 1.03
HPS1-214ENST00000498219 CFAP70Q5T0N1 1121 aa21.45■■□□□ 1.02
HPS1-214ENST00000498219 NALCNQ8IZF0 1738 aa21.45■■□□□ 1.02
HPS1-214ENST00000498219 DHX57Q6P158 1386 aaKnown RBP21.45■■□□□ 1.02
HPS1-214ENST00000498219 C19orf44Q9H6X5 657 aa21.44■■□□□ 1.02
HPS1-214ENST00000498219 SLAIN2Q9P270 581 aa21.43■■□□□ 1.02
HPS1-214ENST00000498219 PTCH1Q13635 1447 aa21.42■■□□□ 1.02
HPS1-214ENST00000498219 SIN3AQ96ST3 1273 aa21.42■■□□□ 1.02
HPS1-214ENST00000498219 C14orf93Q9H972 538 aaKnown RBP21.42■■□□□ 1.02
HPS1-214ENST00000498219 ATF3P18847 181 aa21.41■■□□□ 1.02
HPS1-214ENST00000498219 LAMC1P11047 1609 aa21.4■■□□□ 1.02
HPS1-214ENST00000498219 FAM135BQ49AJ0 1406 aa21.4■■□□□ 1.02
HPS1-214ENST00000498219 ADGRL3Q9HAR2 1447 aa21.39■■□□□ 1.02
HPS1-214ENST00000498219 LRPPRCP42704 1394 aaKnown RBP21.39■■□□□ 1.02
HPS1-214ENST00000498219 KNDC1Q76NI1 1749 aa21.39■■□□□ 1.01
HPS1-214ENST00000498219 CADPS2Q86UW7 1296 aa21.39■■□□□ 1.01
HPS1-214ENST00000498219 PRAG1Q86YV5 1406 aa21.38■■□□□ 1.01
HPS1-214ENST00000498219 YTHDC2Q9H6S0 1430 aaKnown RBP21.38■■□□□ 1.01
HPS1-214ENST00000498219 WAPLQ7Z5K2 1190 aa21.38■■□□□ 1.01
HPS1-214ENST00000498219 NEUROD1Q13562 356 aa21.37■■□□□ 1.01
HPS1-214ENST00000498219 PLEKHH1Q9ULM0 1364 aa21.36■■□□□ 1.01
HPS1-214ENST00000498219 TECPR2O15040 1411 aa21.35■■□□□ 1.01
HPS1-214ENST00000498219 ABCC11Q96J66 1382 aa21.35■■□□□ 1.01
HPS1-214ENST00000498219 DCCP43146 1447 aa21.34■■□□□ 1.01
HPS1-214ENST00000498219 MST1RQ04912 1400 aa21.34■■□□□ 1.01
HPS1-214ENST00000498219 PHLPP1O60346 1717 aa21.33■■□□□ 1.01
HPS1-214ENST00000498219 ADGRB1O14514 1584 aa21.33■■□□□ 1.01
HPS1-214ENST00000498219 L3MBTL2Q969R5 705 aa21.3■■□□□ 1
HPS1-214ENST00000498219 SAFB2Q14151 953 aaKnown RBP eCLIP21.29■■□□□ 1
HPS1-214ENST00000498219 BRINP3Q76B58 766 aa21.29■■□□□ 1
HPS1-214ENST00000498219 STAC3Q96MF2 364 aa21.29■■□□□ 1
HPS1-214ENST00000498219 TRAK1Q9UPV9 953 aa21.29■■□□□ 1
HPS1-214ENST00000498219 PRAM1Q96QH2 718 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms