RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 NUTM2DQ5VT03 806 aaPredicted RBP18.47■□□□□ 0.55
HDLBP-246ENST00000496569 ALKQ9UM73 1620 aa18.47■□□□□ 0.55
HDLBP-246ENST00000496569 LRRC7Q96NW7 1537 aa18.47■□□□□ 0.55
HDLBP-246ENST00000496569 SLC26A8Q96RN1 970 aa18.46■□□□□ 0.55
HDLBP-246ENST00000496569 TRIM52Q96A61 297 aa18.44■□□□□ 0.54
HDLBP-246ENST00000496569 KIF1BO60333 1816 aa18.43■□□□□ 0.54
HDLBP-246ENST00000496569 TRPM2O94759 1503 aa18.42■□□□□ 0.54
HDLBP-246ENST00000496569 BCANQ96GW7 911 aa18.41■□□□□ 0.54
HDLBP-246ENST00000496569 CHD2O14647 1828 aaKnown RBP18.41■□□□□ 0.54
HDLBP-246ENST00000496569 SCAF1Q9H7N4 1312 aaKnown RBP18.41■□□□□ 0.54
HDLBP-246ENST00000496569 NWD1Q149M9 1564 aa18.4■□□□□ 0.54
HDLBP-246ENST00000496569 PIP4K2BP78356 416 aa18.4■□□□□ 0.54
HDLBP-246ENST00000496569 PPP1R15AO75807 674 aaPredicted RBP18.39■□□□□ 0.53
HDLBP-246ENST00000496569 PLEKHG1Q9ULL1 1385 aa18.39■□□□□ 0.53
HDLBP-246ENST00000496569 RBM33Q96EV2 1170 aaKnown RBP18.38■□□□□ 0.53
HDLBP-246ENST00000496569 NRXN3Q9Y4C0 1643 aa18.38■□□□□ 0.53
HDLBP-246ENST00000496569 FOXD1Q16676 465 aa18.37■□□□□ 0.53
HDLBP-246ENST00000496569 ADAMTS13Q76LX8 1427 aa18.35■□□□□ 0.53
HDLBP-246ENST00000496569 SLC4A1APQ9BWU0 796 aaKnown RBP18.35■□□□□ 0.53
HDLBP-246ENST00000496569 NEXMIFQ5QGS0 1516 aa18.34■□□□□ 0.53
HDLBP-246ENST00000496569 TMEM94Q12767 1356 aa18.32■□□□□ 0.52
HDLBP-246ENST00000496569 TOM1O60784 492 aa18.32■□□□□ 0.52
HDLBP-246ENST00000496569 KCNA6P17658 529 aa18.32■□□□□ 0.52
HDLBP-246ENST00000496569 ZNF326Q5BKZ1 582 aaKnown RBP18.32■□□□□ 0.52
HDLBP-246ENST00000496569 DIP2AQ14689 1571 aa18.31■□□□□ 0.52
HDLBP-246ENST00000496569 NKTRP30414 1462 aaKnown RBP18.31■□□□□ 0.52
HDLBP-246ENST00000496569 HSPA1LP34931 641 aa18.3■□□□□ 0.52
HDLBP-246ENST00000496569 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.3■□□□□ 0.52
HDLBP-246ENST00000496569 PPLO60437 1756 aa18.3■□□□□ 0.52
HDLBP-246ENST00000496569 PROSER2Q86WR7 435 aaPredicted RBP18.29■□□□□ 0.52
HDLBP-246ENST00000496569 SETD5Q9C0A6 1442 aa18.29■□□□□ 0.52
HDLBP-246ENST00000496569 SETBP1Q9Y6X0 1596 aa18.29■□□□□ 0.52
HDLBP-246ENST00000496569 ILDR2Q71H61 639 aa18.28■□□□□ 0.52
HDLBP-246ENST00000496569 PTPRUQ92729 1446 aa18.28■□□□□ 0.52
HDLBP-246ENST00000496569 DISP3Q9P2K9 1392 aa18.28■□□□□ 0.52
HDLBP-246ENST00000496569 HDGFP51858 240 aaKnown RBP18.27■□□□□ 0.52
HDLBP-246ENST00000496569 SETD1AO15047 1707 aaKnown RBP18.26■□□□□ 0.51
HDLBP-246ENST00000496569 XRN1Q8IZH2 1706 aaKnown RBP18.26■□□□□ 0.51
HDLBP-246ENST00000496569 RAB3GAP2Q9H2M9 1393 aa18.26■□□□□ 0.51
HDLBP-246ENST00000496569 TBX22Q9Y458 520 aa18.25■□□□□ 0.51
HDLBP-246ENST00000496569 IFT172Q9UG01 1749 aa18.24■□□□□ 0.51
HDLBP-246ENST00000496569 MPHOSPH9Q99550 1183 aa18.24■□□□□ 0.51
HDLBP-246ENST00000496569 ROBO1Q9Y6N7 1651 aa18.24■□□□□ 0.51
HDLBP-246ENST00000496569 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.22■□□□□ 0.51
HDLBP-246ENST00000496569 METP08581 1390 aa18.21■□□□□ 0.51
HDLBP-246ENST00000496569 CCDC144AA2RUR9 1427 aa18.2■□□□□ 0.5
HDLBP-246ENST00000496569 MSH6P52701 1360 aa18.18■□□□□ 0.5
HDLBP-246ENST00000496569 MED1Q15648 1581 aaPredicted RBP18.18■□□□□ 0.5
HDLBP-246ENST00000496569 AMOTL2Q9Y2J4 779 aa18.18■□□□□ 0.5
HDLBP-246ENST00000496569 NALCNQ8IZF0 1738 aa18.18■□□□□ 0.5
HDLBP-246ENST00000496569 PIK3R4Q99570 1358 aa18.17■□□□□ 0.5
HDLBP-246ENST00000496569 SPATA31E1Q6ZUB1 1445 aa18.16■□□□□ 0.5
HDLBP-246ENST00000496569 RGL3Q3MIN7 710 aa18.16■□□□□ 0.5
HDLBP-246ENST00000496569 C14orf37Q86TY3 774 aa18.15■□□□□ 0.5
HDLBP-246ENST00000496569 PHLPP1O60346 1717 aa18.13■□□□□ 0.49
HDLBP-246ENST00000496569 ADGRF5Q8IZF2 1346 aa18.13■□□□□ 0.49
HDLBP-246ENST00000496569 FAM135BQ49AJ0 1406 aa18.12■□□□□ 0.49
HDLBP-246ENST00000496569 ASXL1Q8IXJ9 1541 aa18.11■□□□□ 0.49
HDLBP-246ENST00000496569 RPGRIP1LQ68CZ1 1315 aa18.1■□□□□ 0.49
HDLBP-246ENST00000496569 VGFO15240 615 aaPredicted RBP18.1■□□□□ 0.49
HDLBP-246ENST00000496569 NCOA3Q9Y6Q9 1424 aa18.08■□□□□ 0.49
HDLBP-246ENST00000496569 SLAIN2Q9P270 581 aa18.08■□□□□ 0.48
HDLBP-246ENST00000496569 ROBO2Q9HCK4 1378 aa18.07■□□□□ 0.48
HDLBP-246ENST00000496569 COL16A1Q07092 1604 aaPredicted RBP18.06■□□□□ 0.48
HDLBP-246ENST00000496569 ADGRL3Q9HAR2 1447 aa18.06■□□□□ 0.48
HDLBP-246ENST00000496569 C19orf44Q9H6X5 657 aa18.05■□□□□ 0.48
HDLBP-246ENST00000496569 ANKRD30BQ9BXX2 1392 aa18.04■□□□□ 0.48
HDLBP-246ENST00000496569 ATF3P18847 181 aa18.04■□□□□ 0.48
HDLBP-246ENST00000496569 PIK3C2GO75747 1445 aa18.04■□□□□ 0.48
HDLBP-246ENST00000496569 PTCH1Q13635 1447 aa18.04■□□□□ 0.48
HDLBP-246ENST00000496569 KNDC1Q76NI1 1749 aa18.03■□□□□ 0.48
HDLBP-246ENST00000496569 MST1RQ04912 1400 aa18.03■□□□□ 0.48
HDLBP-246ENST00000496569 CADPS2Q86UW7 1296 aa18.02■□□□□ 0.48
HDLBP-246ENST00000496569 AHDC1Q5TGY3 1603 aaPredicted RBP18.01■□□□□ 0.47
HDLBP-246ENST00000496569 DCCP43146 1447 aa18.01■□□□□ 0.47
HDLBP-246ENST00000496569 TMEM132EQ6IEE7 984 aa18.01■□□□□ 0.47
HDLBP-246ENST00000496569 NHSL1Q5SYE7 1610 aa18.01■□□□□ 0.47
HDLBP-246ENST00000496569 ACIN1Q9UKV3 1341 aaKnown RBP18■□□□□ 0.47
HDLBP-246ENST00000496569 SOCS7O14512 581 aa18■□□□□ 0.47
HDLBP-246ENST00000496569 STK26Q9P289 416 aa18■□□□□ 0.47
HDLBP-246ENST00000496569 MYOM2P54296 1465 aa18■□□□□ 0.47
HDLBP-246ENST00000496569 PRAG1Q86YV5 1406 aa17.99■□□□□ 0.47
HDLBP-246ENST00000496569 BRINP3Q76B58 766 aa17.99■□□□□ 0.47
HDLBP-246ENST00000496569 NRXN1Q9ULB1 1477 aa17.99■□□□□ 0.47
HDLBP-246ENST00000496569 LAMC1P11047 1609 aa17.98■□□□□ 0.47
HDLBP-246ENST00000496569 PLEKHH1Q9ULM0 1364 aa17.97■□□□□ 0.47
HDLBP-246ENST00000496569 DDX17Q92841 729 aaKnown RBP17.97■□□□□ 0.47
HDLBP-246ENST00000496569 CFAP70Q5T0N1 1121 aa17.96■□□□□ 0.47
HDLBP-246ENST00000496569 LRPPRCP42704 1394 aaKnown RBP17.95■□□□□ 0.46
HDLBP-246ENST00000496569 HRCP23327 699 aa17.95■□□□□ 0.46
HDLBP-246ENST00000496569 WAPLQ7Z5K2 1190 aa17.95■□□□□ 0.46
HDLBP-246ENST00000496569 PHF23Q9BUL5 403 aaPredicted RBP17.95■□□□□ 0.46
HDLBP-246ENST00000496569 SHPRHQ149N8 1683 aa17.95■□□□□ 0.46
HDLBP-246ENST00000496569 TECPR2O15040 1411 aa17.94■□□□□ 0.46
HDLBP-246ENST00000496569 YTHDC2Q9H6S0 1430 aaKnown RBP17.94■□□□□ 0.46
HDLBP-246ENST00000496569 CDC42BPGQ6DT37 1551 aa17.94■□□□□ 0.46
HDLBP-246ENST00000496569 C1orf167Q5SNV9 1468 aa17.94■□□□□ 0.46
HDLBP-246ENST00000496569 RGPD8O14715 1765 aaPredicted RBP17.94■□□□□ 0.46
HDLBP-246ENST00000496569 KDM2AQ9Y2K7 1162 aa17.93■□□□□ 0.46
HDLBP-246ENST00000496569 LRP6O75581 1613 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms