RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 ZFYVE9O95405 1425 aa33.65■■■□□ 2.98
CHRD-217ENST00000496527 PPP1R15AO75807 674 aaPredicted RBP33.65■■■□□ 2.98
CHRD-217ENST00000496527 CLTCL1P53675 1640 aa33.64■■■□□ 2.98
CHRD-217ENST00000496527 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.64■■■□□ 2.98
CHRD-217ENST00000496527 ZNF326Q5BKZ1 582 aaKnown RBP33.61■■■□□ 2.97
CHRD-217ENST00000496527 BCANQ96GW7 911 aa33.61■■■□□ 2.97
CHRD-217ENST00000496527 NUTM2DQ5VT03 806 aaPredicted RBP33.58■■■□□ 2.97
CHRD-217ENST00000496527 PLEKHG1Q9ULL1 1385 aa33.55■■■□□ 2.96
CHRD-217ENST00000496527 KIF1BO60333 1816 aa33.55■■■□□ 2.96
CHRD-217ENST00000496527 CCDC144AA2RUR9 1427 aa33.54■■■□□ 2.96
CHRD-217ENST00000496527 SENP3Q9H4L4 574 aaPredicted RBP33.54■■■□□ 2.96
CHRD-217ENST00000496527 FBXO41Q8TF61 875 aa33.53■■■□□ 2.96
CHRD-217ENST00000496527 SLC26A8Q96RN1 970 aa33.53■■■□□ 2.96
CHRD-217ENST00000496527 CPS1P31327 1500 aa33.5■■■□□ 2.95
CHRD-217ENST00000496527 ILDR1Q86SU0 546 aaPredicted RBP33.49■■■□□ 2.95
CHRD-217ENST00000496527 IQSEC2Q5JU85 1478 aa33.46■■■□□ 2.95
CHRD-217ENST00000496527 TRIM26Q12899 539 aaPredicted RBP33.46■■■□□ 2.95
CHRD-217ENST00000496527 RPGRIP1LQ68CZ1 1315 aa33.43■■■□□ 2.94
CHRD-217ENST00000496527 TBX22Q9Y458 520 aa33.42■■■□□ 2.94
CHRD-217ENST00000496527 NEXMIFQ5QGS0 1516 aa33.41■■■□□ 2.94
CHRD-217ENST00000496527 KCNA6P17658 529 aa33.39■■■□□ 2.94
CHRD-217ENST00000496527 STRCP1A6NGW2 1772 aa33.39■■■□□ 2.94
CHRD-217ENST00000496527 VGFO15240 615 aaPredicted RBP33.38■■■□□ 2.93
CHRD-217ENST00000496527 RGL3Q3MIN7 710 aa33.38■■■□□ 2.93
CHRD-217ENST00000496527 ADAMTS13Q76LX8 1427 aa33.37■■■□□ 2.93
CHRD-217ENST00000496527 ANKRD30BQ9BXX2 1392 aa33.36■■■□□ 2.93
CHRD-217ENST00000496527 SPATA31E1Q6ZUB1 1445 aa33.36■■■□□ 2.93
CHRD-217ENST00000496527 DIP2AQ14689 1571 aa33.34■■■□□ 2.93
CHRD-217ENST00000496527 LRRC7Q96NW7 1537 aa33.33■■■□□ 2.93
CHRD-217ENST00000496527 SETBP1Q9Y6X0 1596 aa33.31■■■□□ 2.92
CHRD-217ENST00000496527 UBAP1LF5GYI3 381 aa33.28■■■□□ 2.92
CHRD-217ENST00000496527 PIK3R4Q99570 1358 aa33.28■■■□□ 2.92
CHRD-217ENST00000496527 PPLO60437 1756 aa33.27■■■□□ 2.92
CHRD-217ENST00000496527 PROSER2Q86WR7 435 aaPredicted RBP33.27■■■□□ 2.92
CHRD-217ENST00000496527 NRXN3Q9Y4C0 1643 aa33.27■■■□□ 2.92
CHRD-217ENST00000496527 NWD1Q149M9 1564 aa33.26■■■□□ 2.92
CHRD-217ENST00000496527 NKTRP30414 1462 aaKnown RBP33.25■■■□□ 2.91
CHRD-217ENST00000496527 CHD2O14647 1828 aaKnown RBP33.24■■■□□ 2.91
CHRD-217ENST00000496527 TMEM94Q12767 1356 aa33.21■■■□□ 2.91
CHRD-217ENST00000496527 TOM1O60784 492 aa33.2■■■□□ 2.91
CHRD-217ENST00000496527 AMOTL2Q9Y2J4 779 aa33.2■■■□□ 2.91
CHRD-217ENST00000496527 ADGRF5Q8IZF2 1346 aa33.2■■■□□ 2.91
CHRD-217ENST00000496527 METP08581 1390 aa33.18■■■□□ 2.9
CHRD-217ENST00000496527 RBM33Q96EV2 1170 aaKnown RBP33.17■■■□□ 2.9
CHRD-217ENST00000496527 PTPRUQ92729 1446 aa33.16■■■□□ 2.9
CHRD-217ENST00000496527 IFT172Q9UG01 1749 aa33.16■■■□□ 2.9
CHRD-217ENST00000496527 ALKQ9UM73 1620 aa33.13■■■□□ 2.89
CHRD-217ENST00000496527 XIRP1Q702N8 1843 aaKnown RBP33.12■■■□□ 2.89
CHRD-217ENST00000496527 SCAF1Q9H7N4 1312 aaKnown RBP33.09■■■□□ 2.89
CHRD-217ENST00000496527 PIP4K2BP78356 416 aa33.09■■■□□ 2.89
CHRD-217ENST00000496527 MYOM2P54296 1465 aa33.07■■■□□ 2.88
CHRD-217ENST00000496527 PIK3C2GO75747 1445 aa33.07■■■□□ 2.88
CHRD-217ENST00000496527 NCOA3Q9Y6Q9 1424 aa33.06■■■□□ 2.88
CHRD-217ENST00000496527 C14orf37Q86TY3 774 aa33.06■■■□□ 2.88
CHRD-217ENST00000496527 SETD1AO15047 1707 aaKnown RBP33.05■■■□□ 2.88
CHRD-217ENST00000496527 XRN1Q8IZH2 1706 aaKnown RBP33.05■■■□□ 2.88
CHRD-217ENST00000496527 DCAF11Q8TEB1 546 aa33.05■■■□□ 2.88
CHRD-217ENST00000496527 MSH6P52701 1360 aa33.05■■■□□ 2.88
CHRD-217ENST00000496527 KDM2AQ9Y2K7 1162 aa33.04■■■□□ 2.88
CHRD-217ENST00000496527 DHX57Q6P158 1386 aaKnown RBP33.04■■■□□ 2.88
CHRD-217ENST00000496527 NRXN1Q9ULB1 1477 aa33.02■■■□□ 2.88
CHRD-217ENST00000496527 STAC3Q96MF2 364 aa33.02■■■□□ 2.88
CHRD-217ENST00000496527 C14orf93Q9H972 538 aaKnown RBP32.99■■■□□ 2.87
CHRD-217ENST00000496527 C19orf44Q9H6X5 657 aa32.97■■■□□ 2.87
CHRD-217ENST00000496527 CFAP70Q5T0N1 1121 aa32.96■■■□□ 2.87
CHRD-217ENST00000496527 TMEM132EQ6IEE7 984 aa32.96■■■□□ 2.87
CHRD-217ENST00000496527 SIN3AQ96ST3 1273 aa32.94■■■□□ 2.86
CHRD-217ENST00000496527 PCGF6Q9BYE7 350 aa32.94■■■□□ 2.86
CHRD-217ENST00000496527 PTCH1Q13635 1447 aa32.94■■■□□ 2.86
CHRD-217ENST00000496527 STK26Q9P289 416 aa32.93■■■□□ 2.86
CHRD-217ENST00000496527 ROBO2Q9HCK4 1378 aa32.92■■■□□ 2.86
CHRD-217ENST00000496527 ATF3P18847 181 aa32.91■■■□□ 2.86
CHRD-217ENST00000496527 NEUROD1Q13562 356 aa32.91■■■□□ 2.86
CHRD-217ENST00000496527 LRPPRCP42704 1394 aaKnown RBP32.91■■■□□ 2.86
CHRD-217ENST00000496527 PRAG1Q86YV5 1406 aa32.91■■■□□ 2.86
CHRD-217ENST00000496527 CADPS2Q86UW7 1296 aa32.9■■■□□ 2.86
CHRD-217ENST00000496527 LAMC1P11047 1609 aa32.9■■■□□ 2.86
CHRD-217ENST00000496527 ASXL1Q8IXJ9 1541 aa32.88■■■□□ 2.85
CHRD-217ENST00000496527 SLAIN2Q9P270 581 aa32.88■■■□□ 2.85
CHRD-217ENST00000496527 YTHDC2Q9H6S0 1430 aaKnown RBP32.86■■■□□ 2.85
CHRD-217ENST00000496527 ABCC11Q96J66 1382 aa32.86■■■□□ 2.85
CHRD-217ENST00000496527 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.86■■■□□ 2.85
CHRD-217ENST00000496527 HSPA1LP34931 641 aa32.85■■■□□ 2.85
CHRD-217ENST00000496527 ADGRL3Q9HAR2 1447 aa32.85■■■□□ 2.85
CHRD-217ENST00000496527 TECPR2O15040 1411 aa32.84■■■□□ 2.85
CHRD-217ENST00000496527 FAM135BQ49AJ0 1406 aa32.84■■■□□ 2.85
CHRD-217ENST00000496527 DCCP43146 1447 aa32.83■■■□□ 2.85
CHRD-217ENST00000496527 L3MBTL2Q969R5 705 aa32.81■■■□□ 2.84
CHRD-217ENST00000496527 WAPLQ7Z5K2 1190 aa32.78■■■□□ 2.84
CHRD-217ENST00000496527 KNDC1Q76NI1 1749 aa32.77■■■□□ 2.84
CHRD-217ENST00000496527 SIRT1Q96EB6 747 aa32.77■■■□□ 2.84
CHRD-217ENST00000496527 NALCNQ8IZF0 1738 aa32.77■■■□□ 2.84
CHRD-217ENST00000496527 ROBO1Q9Y6N7 1651 aa32.75■■■□□ 2.83
CHRD-217ENST00000496527 ADGRB1O14514 1584 aa32.75■■■□□ 2.83
CHRD-217ENST00000496527 PLEKHH1Q9ULM0 1364 aa32.72■■■□□ 2.83
CHRD-217ENST00000496527 TRAK1Q9UPV9 953 aa32.7■■■□□ 2.83
CHRD-217ENST00000496527 MST1RQ04912 1400 aa32.69■■■□□ 2.82
CHRD-217ENST00000496527 PRAM1Q96QH2 718 aa32.68■■■□□ 2.82
CHRD-217ENST00000496527 POGKQ9P215 609 aa32.68■■■□□ 2.82
CHRD-217ENST00000496527 DLC1Q96QB1 1528 aa32.67■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms