RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 RIMS2Q9UQ26 1411 aa14.51□□□□□ -0.09
CALD1-223ENST00000496024 ZNF335Q9H4Z2 1342 aaPredicted RBP14.51□□□□□ -0.09
CALD1-223ENST00000496024 KIF1BO60333 1816 aa14.5□□□□□ -0.09
CALD1-223ENST00000496024 MED14O60244 1454 aa14.5□□□□□ -0.09
CALD1-223ENST00000496024 HRCP23327 699 aa14.49□□□□□ -0.09
CALD1-223ENST00000496024 HDGFP51858 240 aaKnown RBP14.49□□□□□ -0.09
CALD1-223ENST00000496024 SLC26A8Q96RN1 970 aa14.48□□□□□ -0.09
CALD1-223ENST00000496024 ZFYVE9O95405 1425 aa14.48□□□□□ -0.09
CALD1-223ENST00000496024 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.47□□□□□ -0.09
CALD1-223ENST00000496024 CERKQ8TCT0 537 aa14.47□□□□□ -0.09
CALD1-223ENST00000496024 CCDC144AA2RUR9 1427 aa14.47□□□□□ -0.09
CALD1-223ENST00000496024 RGL3Q3MIN7 710 aa14.45□□□□□ -0.1
CALD1-223ENST00000496024 LTBP4Q8N2S1 1624 aa14.44□□□□□ -0.1
CALD1-223ENST00000496024 PLEKHG1Q9ULL1 1385 aa14.43□□□□□ -0.1
CALD1-223ENST00000496024 NEXMIFQ5QGS0 1516 aa14.41□□□□□ -0.1
CALD1-223ENST00000496024 ANKRD30BQ9BXX2 1392 aa14.4□□□□□ -0.1
CALD1-223ENST00000496024 STRCP1A6NGW2 1772 aa14.39□□□□□ -0.11
CALD1-223ENST00000496024 SPATA31E1Q6ZUB1 1445 aa14.38□□□□□ -0.11
CALD1-223ENST00000496024 RPGRIP1LQ68CZ1 1315 aa14.38□□□□□ -0.11
CALD1-223ENST00000496024 VGFO15240 615 aaPredicted RBP14.37□□□□□ -0.11
CALD1-223ENST00000496024 PPLO60437 1756 aa14.37□□□□□ -0.11
CALD1-223ENST00000496024 CPS1P31327 1500 aa14.36□□□□□ -0.11
CALD1-223ENST00000496024 ADAMTS13Q76LX8 1427 aa14.36□□□□□ -0.11
CALD1-223ENST00000496024 ILDR1Q86SU0 546 aaPredicted RBP14.36□□□□□ -0.11
CALD1-223ENST00000496024 PCGF6Q9BYE7 350 aa14.36□□□□□ -0.11
CALD1-223ENST00000496024 TBX22Q9Y458 520 aa14.36□□□□□ -0.11
CALD1-223ENST00000496024 KCNA6P17658 529 aa14.35□□□□□ -0.11
CALD1-223ENST00000496024 FBXO41Q8TF61 875 aa14.35□□□□□ -0.11
CALD1-223ENST00000496024 NRXN3Q9Y4C0 1643 aa14.34□□□□□ -0.11
CALD1-223ENST00000496024 RBM33Q96EV2 1170 aaKnown RBP14.34□□□□□ -0.11
CALD1-223ENST00000496024 ADGRF5Q8IZF2 1346 aa14.34□□□□□ -0.11
CALD1-223ENST00000496024 LRRC7Q96NW7 1537 aa14.33□□□□□ -0.12
CALD1-223ENST00000496024 PROSER2Q86WR7 435 aaPredicted RBP14.33□□□□□ -0.12
CALD1-223ENST00000496024 CHD2O14647 1828 aaKnown RBP14.33□□□□□ -0.12
CALD1-223ENST00000496024 SETBP1Q9Y6X0 1596 aa14.33□□□□□ -0.12
CALD1-223ENST00000496024 DIP2AQ14689 1571 aa14.32□□□□□ -0.12
CALD1-223ENST00000496024 IFT172Q9UG01 1749 aa14.32□□□□□ -0.12
CALD1-223ENST00000496024 UBAP1LF5GYI3 381 aa14.31□□□□□ -0.12
CALD1-223ENST00000496024 AMOTL2Q9Y2J4 779 aa14.31□□□□□ -0.12
CALD1-223ENST00000496024 KDM2AQ9Y2K7 1162 aa14.31□□□□□ -0.12
CALD1-223ENST00000496024 DHX57Q6P158 1386 aaKnown RBP14.31□□□□□ -0.12
CALD1-223ENST00000496024 METP08581 1390 aa14.3□□□□□ -0.12
CALD1-223ENST00000496024 IQSEC2Q5JU85 1478 aa14.3□□□□□ -0.12
CALD1-223ENST00000496024 NEUROD1Q13562 356 aa14.29□□□□□ -0.12
CALD1-223ENST00000496024 DCAF11Q8TEB1 546 aa14.29□□□□□ -0.12
CALD1-223ENST00000496024 SIN3AQ96ST3 1273 aa14.29□□□□□ -0.12
CALD1-223ENST00000496024 TMEM94Q12767 1356 aa14.29□□□□□ -0.12
CALD1-223ENST00000496024 PTPRUQ92729 1446 aa14.29□□□□□ -0.12
CALD1-223ENST00000496024 NWD1Q149M9 1564 aa14.29□□□□□ -0.12
CALD1-223ENST00000496024 ALKQ9UM73 1620 aa14.29□□□□□ -0.12
CALD1-223ENST00000496024 XIRP1Q702N8 1843 aaKnown RBP14.28□□□□□ -0.12
CALD1-223ENST00000496024 PIK3R4Q99570 1358 aa14.28□□□□□ -0.12
CALD1-223ENST00000496024 SCAF1Q9H7N4 1312 aaKnown RBP14.28□□□□□ -0.12
CALD1-223ENST00000496024 NKTRP30414 1462 aaKnown RBP14.27□□□□□ -0.12
CALD1-223ENST00000496024 PIP4K2BP78356 416 aa14.27□□□□□ -0.13
CALD1-223ENST00000496024 C14orf37Q86TY3 774 aa14.27□□□□□ -0.13
CALD1-223ENST00000496024 SETD1AO15047 1707 aaKnown RBP14.25□□□□□ -0.13
CALD1-223ENST00000496024 TOM1O60784 492 aa14.25□□□□□ -0.13
CALD1-223ENST00000496024 TMEM132EQ6IEE7 984 aa14.25□□□□□ -0.13
CALD1-223ENST00000496024 CFAP70Q5T0N1 1121 aa14.24□□□□□ -0.13
CALD1-223ENST00000496024 STK26Q9P289 416 aa14.24□□□□□ -0.13
CALD1-223ENST00000496024 MYOM2P54296 1465 aa14.24□□□□□ -0.13
CALD1-223ENST00000496024 PIK3C2GO75747 1445 aa14.24□□□□□ -0.13
CALD1-223ENST00000496024 XRN1Q8IZH2 1706 aaKnown RBP14.23□□□□□ -0.13
CALD1-223ENST00000496024 MSH6P52701 1360 aa14.22□□□□□ -0.13
CALD1-223ENST00000496024 NRXN1Q9ULB1 1477 aa14.21□□□□□ -0.13
CALD1-223ENST00000496024 C14orf93Q9H972 538 aaKnown RBP14.21□□□□□ -0.13
CALD1-223ENST00000496024 L3MBTL2Q969R5 705 aa14.2□□□□□ -0.14
CALD1-223ENST00000496024 ASXL1Q8IXJ9 1541 aa14.19□□□□□ -0.14
CALD1-223ENST00000496024 ROBO2Q9HCK4 1378 aa14.19□□□□□ -0.14
CALD1-223ENST00000496024 STAC3Q96MF2 364 aa14.18□□□□□ -0.14
CALD1-223ENST00000496024 LAMC1P11047 1609 aa14.17□□□□□ -0.14
CALD1-223ENST00000496024 ATF3P18847 181 aa14.17□□□□□ -0.14
CALD1-223ENST00000496024 WAPLQ7Z5K2 1190 aa14.17□□□□□ -0.14
CALD1-223ENST00000496024 C19orf44Q9H6X5 657 aa14.17□□□□□ -0.14
CALD1-223ENST00000496024 LRPPRCP42704 1394 aaKnown RBP14.17□□□□□ -0.14
CALD1-223ENST00000496024 YTHDC2Q9H6S0 1430 aaKnown RBP14.16□□□□□ -0.14
CALD1-223ENST00000496024 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.16□□□□□ -0.14
CALD1-223ENST00000496024 PTCH1Q13635 1447 aa14.15□□□□□ -0.14
CALD1-223ENST00000496024 NCOA3Q9Y6Q9 1424 aa14.15□□□□□ -0.14
CALD1-223ENST00000496024 SLAIN2Q9P270 581 aa14.15□□□□□ -0.14
CALD1-223ENST00000496024 ABCC11Q96J66 1382 aa14.14□□□□□ -0.15
CALD1-223ENST00000496024 SAFB2Q14151 953 aaKnown RBP eCLIP14.14□□□□□ -0.15
CALD1-223ENST00000496024 CADPS2Q86UW7 1296 aa14.14□□□□□ -0.15
CALD1-223ENST00000496024 TRAK1Q9UPV9 953 aa14.14□□□□□ -0.15
CALD1-223ENST00000496024 NALCNQ8IZF0 1738 aa14.13□□□□□ -0.15
CALD1-223ENST00000496024 TONSLQ96HA7 1378 aa14.13□□□□□ -0.15
CALD1-223ENST00000496024 PLEKHH1Q9ULM0 1364 aa14.13□□□□□ -0.15
CALD1-223ENST00000496024 HSPA1LP34931 641 aa14.13□□□□□ -0.15
CALD1-223ENST00000496024 PRAG1Q86YV5 1406 aa14.13□□□□□ -0.15
CALD1-223ENST00000496024 ADGRL3Q9HAR2 1447 aa14.13□□□□□ -0.15
CALD1-223ENST00000496024 NBPF1Q3BBV0 1214 aa14.12□□□□□ -0.15
CALD1-223ENST00000496024 CCER1Q8TC90 406 aaPredicted RBP14.12□□□□□ -0.15
CALD1-223ENST00000496024 TECPR2O15040 1411 aa14.12□□□□□ -0.15
CALD1-223ENST00000496024 KNDC1Q76NI1 1749 aa14.12□□□□□ -0.15
CALD1-223ENST00000496024 ADGRB1O14514 1584 aa14.11□□□□□ -0.15
CALD1-223ENST00000496024 PRAM1Q96QH2 718 aa14.11□□□□□ -0.15
CALD1-223ENST00000496024 POGKQ9P215 609 aa14.11□□□□□ -0.15
CALD1-223ENST00000496024 ROBO1Q9Y6N7 1651 aa14.1□□□□□ -0.15
CALD1-223ENST00000496024 DCCP43146 1447 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms