RNA–Protein interactions for RNA: ENST00000495363.5

SMIM11A-207, Transcript of small integral membrane protein 11A, humanhuman

TSL 5

Gene SMIM11A, Length 1,029 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-207ENST00000495363 FOXD1Q16676 465 aa18.26■□□□□ 0.51
SMIM11A-207ENST00000495363 ZNF326Q5BKZ1 582 aaKnown RBP18.26■□□□□ 0.51
SMIM11A-207ENST00000495363 SETD5Q9C0A6 1442 aa18.25■□□□□ 0.51
SMIM11A-207ENST00000495363 CPS1P31327 1500 aa18.23■□□□□ 0.51
SMIM11A-207ENST00000495363 UBAP1LF5GYI3 381 aa18.23■□□□□ 0.51
SMIM11A-207ENST00000495363 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.23■□□□□ 0.51
SMIM11A-207ENST00000495363 ZFYVE9O95405 1425 aa18.23■□□□□ 0.51
SMIM11A-207ENST00000495363 IQSEC2Q5JU85 1478 aa18.22■□□□□ 0.51
SMIM11A-207ENST00000495363 MPHOSPH9Q99550 1183 aa18.22■□□□□ 0.51
SMIM11A-207ENST00000495363 TRPM2O94759 1503 aa18.21■□□□□ 0.51
SMIM11A-207ENST00000495363 CLTCL1P53675 1640 aa18.2■□□□□ 0.5
SMIM11A-207ENST00000495363 RAB3GAP2Q9H2M9 1393 aa18.2■□□□□ 0.5
SMIM11A-207ENST00000495363 PLEKHG1Q9ULL1 1385 aa18.19■□□□□ 0.5
SMIM11A-207ENST00000495363 STRCP1A6NGW2 1772 aa18.18■□□□□ 0.5
SMIM11A-207ENST00000495363 SCAF1Q9H7N4 1312 aaKnown RBP18.18■□□□□ 0.5
SMIM11A-207ENST00000495363 LRRC7Q96NW7 1537 aa18.15■□□□□ 0.5
SMIM11A-207ENST00000495363 KCNA6P17658 529 aa18.15■□□□□ 0.5
SMIM11A-207ENST00000495363 PIP4K2BP78356 416 aa18.15■□□□□ 0.5
SMIM11A-207ENST00000495363 ACIN1Q9UKV3 1341 aaKnown RBP18.15■□□□□ 0.5
SMIM11A-207ENST00000495363 RBM33Q96EV2 1170 aaKnown RBP18.14■□□□□ 0.49
SMIM11A-207ENST00000495363 TOM1O60784 492 aa18.13■□□□□ 0.49
SMIM11A-207ENST00000495363 KIF1BO60333 1816 aa18.13■□□□□ 0.49
SMIM11A-207ENST00000495363 PROSER2Q86WR7 435 aaPredicted RBP18.12■□□□□ 0.49
SMIM11A-207ENST00000495363 TBX22Q9Y458 520 aa18.12■□□□□ 0.49
SMIM11A-207ENST00000495363 CCDC144AA2RUR9 1427 aa18.12■□□□□ 0.49
SMIM11A-207ENST00000495363 ADAMTS13Q76LX8 1427 aa18.1■□□□□ 0.49
SMIM11A-207ENST00000495363 RGL3Q3MIN7 710 aa18.1■□□□□ 0.49
SMIM11A-207ENST00000495363 TMEM94Q12767 1356 aa18.09■□□□□ 0.49
SMIM11A-207ENST00000495363 NEXMIFQ5QGS0 1516 aa18.08■□□□□ 0.48
SMIM11A-207ENST00000495363 VGFO15240 615 aaPredicted RBP18.06■□□□□ 0.48
SMIM11A-207ENST00000495363 NWD1Q149M9 1564 aa18.05■□□□□ 0.48
SMIM11A-207ENST00000495363 RPGRIP1LQ68CZ1 1315 aa18.05■□□□□ 0.48
SMIM11A-207ENST00000495363 C14orf37Q86TY3 774 aa18.05■□□□□ 0.48
SMIM11A-207ENST00000495363 AMOTL2Q9Y2J4 779 aa18.05■□□□□ 0.48
SMIM11A-207ENST00000495363 DIP2AQ14689 1571 aa18.04■□□□□ 0.48
SMIM11A-207ENST00000495363 NKTRP30414 1462 aaKnown RBP18.04■□□□□ 0.48
SMIM11A-207ENST00000495363 CHD2O14647 1828 aaKnown RBP18.02■□□□□ 0.48
SMIM11A-207ENST00000495363 NRXN3Q9Y4C0 1643 aa18.02■□□□□ 0.48
SMIM11A-207ENST00000495363 HRCP23327 699 aa18.02■□□□□ 0.48
SMIM11A-207ENST00000495363 SETBP1Q9Y6X0 1596 aa18.02■□□□□ 0.48
SMIM11A-207ENST00000495363 XIRP1Q702N8 1843 aaKnown RBP18.02■□□□□ 0.47
SMIM11A-207ENST00000495363 PIK3R4Q99570 1358 aa18.02■□□□□ 0.47
SMIM11A-207ENST00000495363 METP08581 1390 aa18.01■□□□□ 0.47
SMIM11A-207ENST00000495363 SPATA31E1Q6ZUB1 1445 aa18■□□□□ 0.47
SMIM11A-207ENST00000495363 PTPRUQ92729 1446 aa18■□□□□ 0.47
SMIM11A-207ENST00000495363 HSPA1LP34931 641 aa18■□□□□ 0.47
SMIM11A-207ENST00000495363 ALKQ9UM73 1620 aa18■□□□□ 0.47
SMIM11A-207ENST00000495363 MSH6P52701 1360 aa17.99■□□□□ 0.47
SMIM11A-207ENST00000495363 ADGRF5Q8IZF2 1346 aa17.98■□□□□ 0.47
SMIM11A-207ENST00000495363 PPLO60437 1756 aa17.98■□□□□ 0.47
SMIM11A-207ENST00000495363 ANKRD30BQ9BXX2 1392 aa17.96■□□□□ 0.47
SMIM11A-207ENST00000495363 ATF3P18847 181 aa17.92■□□□□ 0.46
SMIM11A-207ENST00000495363 XRN1Q8IZH2 1706 aaKnown RBP17.92■□□□□ 0.46
SMIM11A-207ENST00000495363 C19orf44Q9H6X5 657 aa17.91■□□□□ 0.46
SMIM11A-207ENST00000495363 NCOA3Q9Y6Q9 1424 aa17.9■□□□□ 0.46
SMIM11A-207ENST00000495363 SLAIN2Q9P270 581 aa17.9■□□□□ 0.46
SMIM11A-207ENST00000495363 STK26Q9P289 416 aa17.9■□□□□ 0.46
SMIM11A-207ENST00000495363 IFT172Q9UG01 1749 aa17.89■□□□□ 0.46
SMIM11A-207ENST00000495363 TMEM132EQ6IEE7 984 aa17.89■□□□□ 0.45
SMIM11A-207ENST00000495363 KDM2AQ9Y2K7 1162 aa17.89■□□□□ 0.45
SMIM11A-207ENST00000495363 CADPS2Q86UW7 1296 aa17.88■□□□□ 0.45
SMIM11A-207ENST00000495363 SETD1AO15047 1707 aaKnown RBP17.88■□□□□ 0.45
SMIM11A-207ENST00000495363 TRIM26Q12899 539 aaPredicted RBP17.87■□□□□ 0.45
SMIM11A-207ENST00000495363 DCAF11Q8TEB1 546 aa17.87■□□□□ 0.45
SMIM11A-207ENST00000495363 ROBO2Q9HCK4 1378 aa17.87■□□□□ 0.45
SMIM11A-207ENST00000495363 PIK3C2GO75747 1445 aa17.87■□□□□ 0.45
SMIM11A-207ENST00000495363 FAM135BQ49AJ0 1406 aa17.87■□□□□ 0.45
SMIM11A-207ENST00000495363 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.86■□□□□ 0.45
SMIM11A-207ENST00000495363 CFAP70Q5T0N1 1121 aa17.85■□□□□ 0.45
SMIM11A-207ENST00000495363 DISP3Q9P2K9 1392 aa17.85■□□□□ 0.45
SMIM11A-207ENST00000495363 ROBO1Q9Y6N7 1651 aa17.85■□□□□ 0.45
SMIM11A-207ENST00000495363 MYOM2P54296 1465 aa17.83■□□□□ 0.45
SMIM11A-207ENST00000495363 PTCH1Q13635 1447 aa17.83■□□□□ 0.45
SMIM11A-207ENST00000495363 C14orf93Q9H972 538 aaKnown RBP17.83■□□□□ 0.44
SMIM11A-207ENST00000495363 ADGRL3Q9HAR2 1447 aa17.82■□□□□ 0.44
SMIM11A-207ENST00000495363 LRPPRCP42704 1394 aaKnown RBP17.8■□□□□ 0.44
SMIM11A-207ENST00000495363 WAPLQ7Z5K2 1190 aa17.8■□□□□ 0.44
SMIM11A-207ENST00000495363 ASXL1Q8IXJ9 1541 aa17.8■□□□□ 0.44
SMIM11A-207ENST00000495363 NRXN1Q9ULB1 1477 aa17.8■□□□□ 0.44
SMIM11A-207ENST00000495363 NALCNQ8IZF0 1738 aa17.79■□□□□ 0.44
SMIM11A-207ENST00000495363 DCCP43146 1447 aa17.79■□□□□ 0.44
SMIM11A-207ENST00000495363 YTHDC2Q9H6S0 1430 aaKnown RBP17.79■□□□□ 0.44
SMIM11A-207ENST00000495363 DHX57Q6P158 1386 aaKnown RBP17.79■□□□□ 0.44
SMIM11A-207ENST00000495363 NEUROD1Q13562 356 aa17.77■□□□□ 0.44
SMIM11A-207ENST00000495363 BRINP3Q76B58 766 aa17.77■□□□□ 0.44
SMIM11A-207ENST00000495363 SIN3AQ96ST3 1273 aa17.77■□□□□ 0.44
SMIM11A-207ENST00000495363 MST1RQ04912 1400 aa17.77■□□□□ 0.44
SMIM11A-207ENST00000495363 ABCC11Q96J66 1382 aa17.77■□□□□ 0.43
SMIM11A-207ENST00000495363 PLEKHH1Q9ULM0 1364 aa17.77■□□□□ 0.43
SMIM11A-207ENST00000495363 PRAG1Q86YV5 1406 aa17.76■□□□□ 0.43
SMIM11A-207ENST00000495363 SAFB2Q14151 953 aaKnown RBP eCLIP17.75■□□□□ 0.43
SMIM11A-207ENST00000495363 LAMC1P11047 1609 aa17.75■□□□□ 0.43
SMIM11A-207ENST00000495363 PHLPP1O60346 1717 aa17.75■□□□□ 0.43
SMIM11A-207ENST00000495363 TECPR2O15040 1411 aa17.74■□□□□ 0.43
SMIM11A-207ENST00000495363 STAC3Q96MF2 364 aa17.74■□□□□ 0.43
SMIM11A-207ENST00000495363 NUTM2FA1L443 756 aa17.73■□□□□ 0.43
SMIM11A-207ENST00000495363 TRAK1Q9UPV9 953 aa17.73■□□□□ 0.43
SMIM11A-207ENST00000495363 MED1Q15648 1581 aaPredicted RBP17.72■□□□□ 0.43
SMIM11A-207ENST00000495363 DDX17Q92841 729 aaKnown RBP17.72■□□□□ 0.43
SMIM11A-207ENST00000495363 PRAM1Q96QH2 718 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms