RNA–Protein interactions for RNA: ENST00000495221.1

PDE1C-211, Transcript of phosphodiesterase 1C, humanhuman

TSL 4

Gene PDE1C, Length 540 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-211ENST00000495221 SCAF1Q9H7N4 1312 aaKnown RBP32.97■■■□□ 2.87
PDE1C-211ENST00000495221 NWD1Q149M9 1564 aa32.96■■■□□ 2.87
PDE1C-211ENST00000495221 RIMS2Q9UQ26 1411 aa32.94■■■□□ 2.86
PDE1C-211ENST00000495221 SOCS7O14512 581 aa32.93■■■□□ 2.86
PDE1C-211ENST00000495221 HDGFP51858 240 aaKnown RBP32.92■■■□□ 2.86
PDE1C-211ENST00000495221 PLEKHG1Q9ULL1 1385 aa32.92■■■□□ 2.86
PDE1C-211ENST00000495221 NKTRP30414 1462 aaKnown RBP32.91■■■□□ 2.86
PDE1C-211ENST00000495221 CHD2O14647 1828 aaKnown RBP32.91■■■□□ 2.86
PDE1C-211ENST00000495221 KCNA6P17658 529 aa32.89■■■□□ 2.86
PDE1C-211ENST00000495221 NAIPQ13075 1403 aa32.88■■■□□ 2.85
PDE1C-211ENST00000495221 HSPA1LP34931 641 aa32.88■■■□□ 2.85
PDE1C-211ENST00000495221 SLC26A8Q96RN1 970 aa32.88■■■□□ 2.85
PDE1C-211ENST00000495221 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.85■■■□□ 2.85
PDE1C-211ENST00000495221 DIP2AQ14689 1571 aa32.84■■■□□ 2.85
PDE1C-211ENST00000495221 PPP1R15AO75807 674 aaPredicted RBP32.84■■■□□ 2.85
PDE1C-211ENST00000495221 CHGAP10645 457 aaKnown RBP32.82■■■□□ 2.84
PDE1C-211ENST00000495221 TMEM94Q12767 1356 aa32.82■■■□□ 2.84
PDE1C-211ENST00000495221 BCANQ96GW7 911 aa32.81■■■□□ 2.84
PDE1C-211ENST00000495221 HFM1A2PYH4 1435 aa32.8■■■□□ 2.84
PDE1C-211ENST00000495221 TRPM2O94759 1503 aa32.77■■■□□ 2.84
PDE1C-211ENST00000495221 MED1Q15648 1581 aaPredicted RBP32.76■■■□□ 2.84
PDE1C-211ENST00000495221 TBX22Q9Y458 520 aa32.75■■■□□ 2.83
PDE1C-211ENST00000495221 KIF1BO60333 1816 aa32.74■■■□□ 2.83
PDE1C-211ENST00000495221 PROSER2Q86WR7 435 aaPredicted RBP32.74■■■□□ 2.83
PDE1C-211ENST00000495221 ADAMTS13Q76LX8 1427 aa32.74■■■□□ 2.83
PDE1C-211ENST00000495221 CLTCL1P53675 1640 aa32.73■■■□□ 2.83
PDE1C-211ENST00000495221 PIK3R4Q99570 1358 aa32.71■■■□□ 2.83
PDE1C-211ENST00000495221 FAM135BQ49AJ0 1406 aa32.69■■■□□ 2.82
PDE1C-211ENST00000495221 NRXN3Q9Y4C0 1643 aa32.68■■■□□ 2.82
PDE1C-211ENST00000495221 SETBP1Q9Y6X0 1596 aa32.67■■■□□ 2.82
PDE1C-211ENST00000495221 ROBO1Q9Y6N7 1651 aa32.66■■■□□ 2.82
PDE1C-211ENST00000495221 SENP3Q9H4L4 574 aaPredicted RBP32.66■■■□□ 2.82
PDE1C-211ENST00000495221 MSH6P52701 1360 aa32.66■■■□□ 2.82
PDE1C-211ENST00000495221 NCOA3Q9Y6Q9 1424 aa32.66■■■□□ 2.82
PDE1C-211ENST00000495221 NUTM2DQ5VT03 806 aaPredicted RBP32.65■■■□□ 2.82
PDE1C-211ENST00000495221 NEXMIFQ5QGS0 1516 aa32.62■■■□□ 2.81
PDE1C-211ENST00000495221 RBM33Q96EV2 1170 aaKnown RBP32.61■■■□□ 2.81
PDE1C-211ENST00000495221 XRN1Q8IZH2 1706 aaKnown RBP32.58■■■□□ 2.81
PDE1C-211ENST00000495221 TRIM52Q96A61 297 aa32.58■■■□□ 2.81
PDE1C-211ENST00000495221 ZNF326Q5BKZ1 582 aaKnown RBP32.57■■■□□ 2.8
PDE1C-211ENST00000495221 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.55■■■□□ 2.8
PDE1C-211ENST00000495221 PTPRUQ92729 1446 aa32.52■■■□□ 2.8
PDE1C-211ENST00000495221 SLC4A1APQ9BWU0 796 aaKnown RBP32.52■■■□□ 2.8
PDE1C-211ENST00000495221 PHLPP1O60346 1717 aa32.48■■■□□ 2.79
PDE1C-211ENST00000495221 PPLO60437 1756 aa32.48■■■□□ 2.79
PDE1C-211ENST00000495221 SLAIN2Q9P270 581 aa32.48■■■□□ 2.79
PDE1C-211ENST00000495221 AMOTL2Q9Y2J4 779 aa32.48■■■□□ 2.79
PDE1C-211ENST00000495221 SETD1AO15047 1707 aaKnown RBP32.46■■■□□ 2.79
PDE1C-211ENST00000495221 C14orf37Q86TY3 774 aa32.44■■■□□ 2.78
PDE1C-211ENST00000495221 C19orf44Q9H6X5 657 aa32.44■■■□□ 2.78
PDE1C-211ENST00000495221 DCCP43146 1447 aa32.43■■■□□ 2.78
PDE1C-211ENST00000495221 CADPS2Q86UW7 1296 aa32.42■■■□□ 2.78
PDE1C-211ENST00000495221 PHF23Q9BUL5 403 aaPredicted RBP32.42■■■□□ 2.78
PDE1C-211ENST00000495221 METP08581 1390 aa32.41■■■□□ 2.78
PDE1C-211ENST00000495221 RPGRIP1LQ68CZ1 1315 aa32.4■■■□□ 2.78
PDE1C-211ENST00000495221 ACIN1Q9UKV3 1341 aaKnown RBP32.39■■■□□ 2.78
PDE1C-211ENST00000495221 VGFO15240 615 aaPredicted RBP32.38■■■□□ 2.77
PDE1C-211ENST00000495221 COL16A1Q07092 1604 aaPredicted RBP32.37■■■□□ 2.77
PDE1C-211ENST00000495221 ATF3P18847 181 aa32.37■■■□□ 2.77
PDE1C-211ENST00000495221 AHDC1Q5TGY3 1603 aaPredicted RBP32.36■■■□□ 2.77
PDE1C-211ENST00000495221 CCDC144AA2RUR9 1427 aa32.34■■■□□ 2.77
PDE1C-211ENST00000495221 IFT172Q9UG01 1749 aa32.34■■■□□ 2.77
PDE1C-211ENST00000495221 NALCNQ8IZF0 1738 aa32.34■■■□□ 2.77
PDE1C-211ENST00000495221 MPHOSPH9Q99550 1183 aa32.31■■■□□ 2.76
PDE1C-211ENST00000495221 PRAG1Q86YV5 1406 aa32.31■■■□□ 2.76
PDE1C-211ENST00000495221 PTCH1Q13635 1447 aa32.3■■■□□ 2.76
PDE1C-211ENST00000495221 ADGRL3Q9HAR2 1447 aa32.3■■■□□ 2.76
PDE1C-211ENST00000495221 SETD5Q9C0A6 1442 aa32.29■■■□□ 2.76
PDE1C-211ENST00000495221 FOXD1Q16676 465 aa32.29■■■□□ 2.76
PDE1C-211ENST00000495221 JCADQ9P266 1359 aa32.29■■■□□ 2.76
PDE1C-211ENST00000495221 SPATA31E1Q6ZUB1 1445 aa32.26■■■□□ 2.76
PDE1C-211ENST00000495221 SHPRHQ149N8 1683 aa32.25■■■□□ 2.75
PDE1C-211ENST00000495221 MST1RQ04912 1400 aa32.25■■■□□ 2.75
PDE1C-211ENST00000495221 NHSL1Q5SYE7 1610 aa32.23■■■□□ 2.75
PDE1C-211ENST00000495221 ASXL1Q8IXJ9 1541 aa32.22■■■□□ 2.75
PDE1C-211ENST00000495221 BRINP3Q76B58 766 aa32.2■■■□□ 2.75
PDE1C-211ENST00000495221 ANKRD30BQ9BXX2 1392 aa32.19■■■□□ 2.74
PDE1C-211ENST00000495221 RGS17Q9UGC6 210 aaPredicted RBP32.18■■■□□ 2.74
PDE1C-211ENST00000495221 ROBO2Q9HCK4 1378 aa32.16■■■□□ 2.74
PDE1C-211ENST00000495221 RAB3GAP2Q9H2M9 1393 aa32.15■■■□□ 2.74
PDE1C-211ENST00000495221 SPATA31A6Q5VVP1 1343 aa32.14■■■□□ 2.74
PDE1C-211ENST00000495221 KNDC1Q76NI1 1749 aa32.14■■■□□ 2.74
PDE1C-211ENST00000495221 ADGRF5Q8IZF2 1346 aa32.12■■■□□ 2.73
PDE1C-211ENST00000495221 RGL3Q3MIN7 710 aa32.11■■■□□ 2.73
PDE1C-211ENST00000495221 LAMC1P11047 1609 aa32.11■■■□□ 2.73
PDE1C-211ENST00000495221 PIK3C2GO75747 1445 aa32.09■■■□□ 2.73
PDE1C-211ENST00000495221 C1orf167Q5SNV9 1468 aa32.08■■■□□ 2.73
PDE1C-211ENST00000495221 TECPR2O15040 1411 aa32.08■■■□□ 2.73
PDE1C-211ENST00000495221 LRP6O75581 1613 aa32.08■■■□□ 2.73
PDE1C-211ENST00000495221 CDC42BPGQ6DT37 1551 aa32.07■■■□□ 2.72
PDE1C-211ENST00000495221 MYOM2P54296 1465 aa32.04■■■□□ 2.72
PDE1C-211ENST00000495221 LRPPRCP42704 1394 aaKnown RBP32.02■■■□□ 2.72
PDE1C-211ENST00000495221 NRXN1Q9ULB1 1477 aa32.02■■■□□ 2.72
PDE1C-211ENST00000495221 POTEAQ6S8J7 498 aa32■■■□□ 2.71
PDE1C-211ENST00000495221 ABCC11Q96J66 1382 aa31.98■■■□□ 2.71
PDE1C-211ENST00000495221 LRRC59Q96AG4 307 aaKnown RBP31.98■■■□□ 2.71
PDE1C-211ENST00000495221 HRCP23327 699 aa31.96■■■□□ 2.71
PDE1C-211ENST00000495221 YTHDC2Q9H6S0 1430 aaKnown RBP31.94■■■□□ 2.7
PDE1C-211ENST00000495221 MEX3CQ5U5Q3 659 aaKnown RBP31.94■■■□□ 2.7
PDE1C-211ENST00000495221 FMN2Q9NZ56 1722 aa31.91■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms