RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 CERKQ8TCT0 537 aa25.42■■□□□ 1.66
SNX17-209ENST00000494893 NUTM2DQ5VT03 806 aaPredicted RBP25.39■■□□□ 1.66
SNX17-209ENST00000494893 PLEKHG1Q9ULL1 1385 aa25.38■■□□□ 1.65
SNX17-209ENST00000494893 TRIM26Q12899 539 aaPredicted RBP25.36■■□□□ 1.65
SNX17-209ENST00000494893 NEXMIFQ5QGS0 1516 aa25.36■■□□□ 1.65
SNX17-209ENST00000494893 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.35■■□□□ 1.65
SNX17-209ENST00000494893 SENP3Q9H4L4 574 aaPredicted RBP25.35■■□□□ 1.65
SNX17-209ENST00000494893 STRCP1A6NGW2 1772 aa25.35■■□□□ 1.65
SNX17-209ENST00000494893 KIF1BO60333 1816 aa25.35■■□□□ 1.65
SNX17-209ENST00000494893 SLC26A8Q96RN1 970 aa25.34■■□□□ 1.65
SNX17-209ENST00000494893 CCDC144AA2RUR9 1427 aa25.34■■□□□ 1.65
SNX17-209ENST00000494893 SPATA31E1Q6ZUB1 1445 aa25.32■■□□□ 1.64
SNX17-209ENST00000494893 PPP1R15AO75807 674 aaPredicted RBP25.32■■□□□ 1.64
SNX17-209ENST00000494893 HDGFP51858 240 aaKnown RBP25.32■■□□□ 1.64
SNX17-209ENST00000494893 ZNF326Q5BKZ1 582 aaKnown RBP25.32■■□□□ 1.64
SNX17-209ENST00000494893 ADAMTS13Q76LX8 1427 aa25.31■■□□□ 1.64
SNX17-209ENST00000494893 ANKRD30BQ9BXX2 1392 aa25.31■■□□□ 1.64
SNX17-209ENST00000494893 CPS1P31327 1500 aa25.3■■□□□ 1.64
SNX17-209ENST00000494893 NRXN3Q9Y4C0 1643 aa25.28■■□□□ 1.64
SNX17-209ENST00000494893 IQSEC2Q5JU85 1478 aa25.27■■□□□ 1.64
SNX17-209ENST00000494893 ILDR1Q86SU0 546 aaPredicted RBP25.26■■□□□ 1.63
SNX17-209ENST00000494893 FBXO41Q8TF61 875 aa25.25■■□□□ 1.63
SNX17-209ENST00000494893 BCANQ96GW7 911 aa25.25■■□□□ 1.63
SNX17-209ENST00000494893 SETBP1Q9Y6X0 1596 aa25.25■■□□□ 1.63
SNX17-209ENST00000494893 LRRC7Q96NW7 1537 aa25.24■■□□□ 1.63
SNX17-209ENST00000494893 TBX22Q9Y458 520 aa25.24■■□□□ 1.63
SNX17-209ENST00000494893 RPGRIP1LQ68CZ1 1315 aa25.23■■□□□ 1.63
SNX17-209ENST00000494893 NWD1Q149M9 1564 aa25.22■■□□□ 1.63
SNX17-209ENST00000494893 PPLO60437 1756 aa25.22■■□□□ 1.63
SNX17-209ENST00000494893 DIP2AQ14689 1571 aa25.22■■□□□ 1.63
SNX17-209ENST00000494893 KCNA6P17658 529 aa25.21■■□□□ 1.63
SNX17-209ENST00000494893 RGL3Q3MIN7 710 aa25.21■■□□□ 1.63
SNX17-209ENST00000494893 IFT172Q9UG01 1749 aa25.18■■□□□ 1.62
SNX17-209ENST00000494893 PTPRUQ92729 1446 aa25.18■■□□□ 1.62
SNX17-209ENST00000494893 PCGF6Q9BYE7 350 aa25.17■■□□□ 1.62
SNX17-209ENST00000494893 CHD2O14647 1828 aaKnown RBP25.16■■□□□ 1.62
SNX17-209ENST00000494893 VGFO15240 615 aaPredicted RBP25.16■■□□□ 1.62
SNX17-209ENST00000494893 ADGRF5Q8IZF2 1346 aa25.15■■□□□ 1.62
SNX17-209ENST00000494893 METP08581 1390 aa25.15■■□□□ 1.62
SNX17-209ENST00000494893 PIK3R4Q99570 1358 aa25.14■■□□□ 1.61
SNX17-209ENST00000494893 NKTRP30414 1462 aaKnown RBP25.14■■□□□ 1.61
SNX17-209ENST00000494893 XIRP1Q702N8 1843 aaKnown RBP25.13■■□□□ 1.61
SNX17-209ENST00000494893 SETD1AO15047 1707 aaKnown RBP25.12■■□□□ 1.61
SNX17-209ENST00000494893 ALKQ9UM73 1620 aa25.12■■□□□ 1.61
SNX17-209ENST00000494893 TMEM94Q12767 1356 aa25.11■■□□□ 1.61
SNX17-209ENST00000494893 RBM33Q96EV2 1170 aaKnown RBP25.1■■□□□ 1.61
SNX17-209ENST00000494893 DHX57Q6P158 1386 aaKnown RBP25.09■■□□□ 1.61
SNX17-209ENST00000494893 PROSER2Q86WR7 435 aaPredicted RBP25.08■■□□□ 1.61
SNX17-209ENST00000494893 XRN1Q8IZH2 1706 aaKnown RBP25.08■■□□□ 1.61
SNX17-209ENST00000494893 NRXN1Q9ULB1 1477 aa25.08■■□□□ 1.6
SNX17-209ENST00000494893 UBAP1LF5GYI3 381 aa25.07■■□□□ 1.6
SNX17-209ENST00000494893 AMOTL2Q9Y2J4 779 aa25.07■■□□□ 1.6
SNX17-209ENST00000494893 PIK3C2GO75747 1445 aa25.06■■□□□ 1.6
SNX17-209ENST00000494893 MYOM2P54296 1465 aa25.06■■□□□ 1.6
SNX17-209ENST00000494893 ASXL1Q8IXJ9 1541 aa25.02■■□□□ 1.6
SNX17-209ENST00000494893 SIN3AQ96ST3 1273 aa24.98■■□□□ 1.59
SNX17-209ENST00000494893 PRAG1Q86YV5 1406 aa24.97■■□□□ 1.59
SNX17-209ENST00000494893 NCOA3Q9Y6Q9 1424 aa24.96■■□□□ 1.59
SNX17-209ENST00000494893 TOM1O60784 492 aa24.96■■□□□ 1.59
SNX17-209ENST00000494893 DCAF11Q8TEB1 546 aa24.96■■□□□ 1.59
SNX17-209ENST00000494893 C14orf93Q9H972 538 aaKnown RBP24.96■■□□□ 1.59
SNX17-209ENST00000494893 KDM2AQ9Y2K7 1162 aa24.95■■□□□ 1.58
SNX17-209ENST00000494893 ROBO2Q9HCK4 1378 aa24.94■■□□□ 1.58
SNX17-209ENST00000494893 CFAP70Q5T0N1 1121 aa24.94■■□□□ 1.58
SNX17-209ENST00000494893 TMEM132EQ6IEE7 984 aa24.94■■□□□ 1.58
SNX17-209ENST00000494893 PTCH1Q13635 1447 aa24.93■■□□□ 1.58
SNX17-209ENST00000494893 PIP4K2BP78356 416 aa24.92■■□□□ 1.58
SNX17-209ENST00000494893 MSH6P52701 1360 aa24.91■■□□□ 1.58
SNX17-209ENST00000494893 LRPPRCP42704 1394 aaKnown RBP24.9■■□□□ 1.58
SNX17-209ENST00000494893 LAMC1P11047 1609 aa24.9■■□□□ 1.58
SNX17-209ENST00000494893 TECPR2O15040 1411 aa24.89■■□□□ 1.58
SNX17-209ENST00000494893 STAC3Q96MF2 364 aa24.88■■□□□ 1.57
SNX17-209ENST00000494893 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.88■■□□□ 1.57
SNX17-209ENST00000494893 ADGRB1O14514 1584 aa24.88■■□□□ 1.57
SNX17-209ENST00000494893 YTHDC2Q9H6S0 1430 aaKnown RBP24.87■■□□□ 1.57
SNX17-209ENST00000494893 ABCC11Q96J66 1382 aa24.87■■□□□ 1.57
SNX17-209ENST00000494893 SCAF1Q9H7N4 1312 aaKnown RBP24.86■■□□□ 1.57
SNX17-209ENST00000494893 NEUROD1Q13562 356 aa24.86■■□□□ 1.57
SNX17-209ENST00000494893 C19orf44Q9H6X5 657 aa24.86■■□□□ 1.57
SNX17-209ENST00000494893 STK26Q9P289 416 aa24.86■■□□□ 1.57
SNX17-209ENST00000494893 ADGRL3Q9HAR2 1447 aa24.86■■□□□ 1.57
SNX17-209ENST00000494893 C14orf37Q86TY3 774 aa24.85■■□□□ 1.57
SNX17-209ENST00000494893 L3MBTL2Q969R5 705 aa24.85■■□□□ 1.57
SNX17-209ENST00000494893 NALCNQ8IZF0 1738 aa24.85■■□□□ 1.57
SNX17-209ENST00000494893 KNDC1Q76NI1 1749 aa24.84■■□□□ 1.57
SNX17-209ENST00000494893 PLEKHH1Q9ULM0 1364 aa24.82■■□□□ 1.56
SNX17-209ENST00000494893 DCCP43146 1447 aa24.81■■□□□ 1.56
SNX17-209ENST00000494893 FAM135BQ49AJ0 1406 aa24.81■■□□□ 1.56
SNX17-209ENST00000494893 HSPA1LP34931 641 aa24.81■■□□□ 1.56
SNX17-209ENST00000494893 WAPLQ7Z5K2 1190 aa24.81■■□□□ 1.56
SNX17-209ENST00000494893 SLAIN2Q9P270 581 aa24.8■■□□□ 1.56
SNX17-209ENST00000494893 CADPS2Q86UW7 1296 aa24.78■■□□□ 1.56
SNX17-209ENST00000494893 ROBO1Q9Y6N7 1651 aa24.78■■□□□ 1.56
SNX17-209ENST00000494893 ATF3P18847 181 aa24.77■■□□□ 1.56
SNX17-209ENST00000494893 MST1RQ04912 1400 aa24.77■■□□□ 1.56
SNX17-209ENST00000494893 SIRT1Q96EB6 747 aa24.76■■□□□ 1.55
SNX17-209ENST00000494893 DLC1Q96QB1 1528 aa24.75■■□□□ 1.55
SNX17-209ENST00000494893 KIAA1210Q9ULL0 1709 aa24.73■■□□□ 1.55
SNX17-209ENST00000494893 NBPF1Q3BBV0 1214 aa24.73■■□□□ 1.55
SNX17-209ENST00000494893 TRAK1Q9UPV9 953 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms