RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 UBAP1LF5GYI3 381 aa19.84■□□□□ 0.77
ERCC3-209ENST00000494464 XIRP1Q702N8 1843 aaKnown RBP19.84■□□□□ 0.77
ERCC3-209ENST00000494464 DIP2AQ14689 1571 aa19.83■□□□□ 0.77
ERCC3-209ENST00000494464 ALKQ9UM73 1620 aa19.83■□□□□ 0.76
ERCC3-209ENST00000494464 HDGFP51858 240 aaKnown RBP19.83■□□□□ 0.76
ERCC3-209ENST00000494464 NKTRP30414 1462 aaKnown RBP19.82■□□□□ 0.76
ERCC3-209ENST00000494464 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.82■□□□□ 0.76
ERCC3-209ENST00000494464 CHGAP10645 457 aaKnown RBP19.81■□□□□ 0.76
ERCC3-209ENST00000494464 KIF1BO60333 1816 aa19.8■□□□□ 0.76
ERCC3-209ENST00000494464 CHD2O14647 1828 aaKnown RBP19.8■□□□□ 0.76
ERCC3-209ENST00000494464 PPP1R15AO75807 674 aaPredicted RBP19.79■□□□□ 0.76
ERCC3-209ENST00000494464 TOM1O60784 492 aa19.78■□□□□ 0.76
ERCC3-209ENST00000494464 TRIM52Q96A61 297 aa19.78■□□□□ 0.76
ERCC3-209ENST00000494464 SLC26A8Q96RN1 970 aa19.78■□□□□ 0.76
ERCC3-209ENST00000494464 SETBP1Q9Y6X0 1596 aa19.76■□□□□ 0.75
ERCC3-209ENST00000494464 ADAMTS13Q76LX8 1427 aa19.76■□□□□ 0.75
ERCC3-209ENST00000494464 NEXMIFQ5QGS0 1516 aa19.76■□□□□ 0.75
ERCC3-209ENST00000494464 KCNA6P17658 529 aa19.76■□□□□ 0.75
ERCC3-209ENST00000494464 NRXN3Q9Y4C0 1643 aa19.75■□□□□ 0.75
ERCC3-209ENST00000494464 SLC4A1APQ9BWU0 796 aaKnown RBP19.75■□□□□ 0.75
ERCC3-209ENST00000494464 BCANQ96GW7 911 aa19.73■□□□□ 0.75
ERCC3-209ENST00000494464 ACIN1Q9UKV3 1341 aaKnown RBP19.73■□□□□ 0.75
ERCC3-209ENST00000494464 PIK3R4Q99570 1358 aa19.72■□□□□ 0.75
ERCC3-209ENST00000494464 TBX22Q9Y458 520 aa19.72■□□□□ 0.75
ERCC3-209ENST00000494464 TMEM94Q12767 1356 aa19.72■□□□□ 0.75
ERCC3-209ENST00000494464 SETD5Q9C0A6 1442 aa19.71■□□□□ 0.75
ERCC3-209ENST00000494464 PIP4K2BP78356 416 aa19.69■□□□□ 0.74
ERCC3-209ENST00000494464 NUTM2DQ5VT03 806 aaPredicted RBP19.69■□□□□ 0.74
ERCC3-209ENST00000494464 XRN1Q8IZH2 1706 aaKnown RBP19.68■□□□□ 0.74
ERCC3-209ENST00000494464 ZNF326Q5BKZ1 582 aaKnown RBP19.68■□□□□ 0.74
ERCC3-209ENST00000494464 SCAF1Q9H7N4 1312 aaKnown RBP19.67■□□□□ 0.74
ERCC3-209ENST00000494464 PPLO60437 1756 aa19.67■□□□□ 0.74
ERCC3-209ENST00000494464 PROSER2Q86WR7 435 aaPredicted RBP19.66■□□□□ 0.74
ERCC3-209ENST00000494464 SENP3Q9H4L4 574 aaPredicted RBP19.66■□□□□ 0.74
ERCC3-209ENST00000494464 NCOA3Q9Y6Q9 1424 aa19.65■□□□□ 0.74
ERCC3-209ENST00000494464 CCDC144AA2RUR9 1427 aa19.65■□□□□ 0.74
ERCC3-209ENST00000494464 MPHOSPH9Q99550 1183 aa19.64■□□□□ 0.73
ERCC3-209ENST00000494464 RAB3GAP2Q9H2M9 1393 aa19.64■□□□□ 0.73
ERCC3-209ENST00000494464 SETD1AO15047 1707 aaKnown RBP19.64■□□□□ 0.73
ERCC3-209ENST00000494464 PTPRUQ92729 1446 aa19.63■□□□□ 0.73
ERCC3-209ENST00000494464 IFT172Q9UG01 1749 aa19.62■□□□□ 0.73
ERCC3-209ENST00000494464 MSH6P52701 1360 aa19.62■□□□□ 0.73
ERCC3-209ENST00000494464 HSPA1LP34931 641 aa19.62■□□□□ 0.73
ERCC3-209ENST00000494464 RPGRIP1LQ68CZ1 1315 aa19.61■□□□□ 0.73
ERCC3-209ENST00000494464 FOXD1Q16676 465 aa19.61■□□□□ 0.73
ERCC3-209ENST00000494464 SPATA31E1Q6ZUB1 1445 aa19.61■□□□□ 0.73
ERCC3-209ENST00000494464 FAM135BQ49AJ0 1406 aa19.6■□□□□ 0.73
ERCC3-209ENST00000494464 ROBO1Q9Y6N7 1651 aa19.59■□□□□ 0.73
ERCC3-209ENST00000494464 VGFO15240 615 aaPredicted RBP19.57■□□□□ 0.72
ERCC3-209ENST00000494464 RBM33Q96EV2 1170 aaKnown RBP19.57■□□□□ 0.72
ERCC3-209ENST00000494464 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.57■□□□□ 0.72
ERCC3-209ENST00000494464 METP08581 1390 aa19.57■□□□□ 0.72
ERCC3-209ENST00000494464 AMOTL2Q9Y2J4 779 aa19.56■□□□□ 0.72
ERCC3-209ENST00000494464 PRAG1Q86YV5 1406 aa19.56■□□□□ 0.72
ERCC3-209ENST00000494464 DISP3Q9P2K9 1392 aa19.54■□□□□ 0.72
ERCC3-209ENST00000494464 MED1Q15648 1581 aaPredicted RBP19.54■□□□□ 0.72
ERCC3-209ENST00000494464 DCCP43146 1447 aa19.54■□□□□ 0.72
ERCC3-209ENST00000494464 PTCH1Q13635 1447 aa19.52■□□□□ 0.72
ERCC3-209ENST00000494464 HRCP23327 699 aa19.52■□□□□ 0.72
ERCC3-209ENST00000494464 ANKRD30BQ9BXX2 1392 aa19.52■□□□□ 0.72
ERCC3-209ENST00000494464 NALCNQ8IZF0 1738 aa19.51■□□□□ 0.71
ERCC3-209ENST00000494464 C19orf44Q9H6X5 657 aa19.5■□□□□ 0.71
ERCC3-209ENST00000494464 TRIM26Q12899 539 aaPredicted RBP19.49■□□□□ 0.71
ERCC3-209ENST00000494464 C14orf37Q86TY3 774 aa19.49■□□□□ 0.71
ERCC3-209ENST00000494464 CADPS2Q86UW7 1296 aa19.48■□□□□ 0.71
ERCC3-209ENST00000494464 PIK3C2GO75747 1445 aa19.48■□□□□ 0.71
ERCC3-209ENST00000494464 ADGRL3Q9HAR2 1447 aa19.48■□□□□ 0.71
ERCC3-209ENST00000494464 SLAIN2Q9P270 581 aa19.47■□□□□ 0.71
ERCC3-209ENST00000494464 MYOM2P54296 1465 aa19.47■□□□□ 0.71
ERCC3-209ENST00000494464 PHLPP1O60346 1717 aa19.46■□□□□ 0.71
ERCC3-209ENST00000494464 KNDC1Q76NI1 1749 aa19.46■□□□□ 0.71
ERCC3-209ENST00000494464 LAMC1P11047 1609 aa19.45■□□□□ 0.7
ERCC3-209ENST00000494464 RGL3Q3MIN7 710 aa19.45■□□□□ 0.7
ERCC3-209ENST00000494464 NRXN1Q9ULB1 1477 aa19.45■□□□□ 0.7
ERCC3-209ENST00000494464 ADGRF5Q8IZF2 1346 aa19.45■□□□□ 0.7
ERCC3-209ENST00000494464 ASXL1Q8IXJ9 1541 aa19.45■□□□□ 0.7
ERCC3-209ENST00000494464 AHDC1Q5TGY3 1603 aaPredicted RBP19.45■□□□□ 0.7
ERCC3-209ENST00000494464 ATF3P18847 181 aa19.44■□□□□ 0.7
ERCC3-209ENST00000494464 COL16A1Q07092 1604 aaPredicted RBP19.44■□□□□ 0.7
ERCC3-209ENST00000494464 ROBO2Q9HCK4 1378 aa19.42■□□□□ 0.7
ERCC3-209ENST00000494464 TECPR2O15040 1411 aa19.42■□□□□ 0.7
ERCC3-209ENST00000494464 MST1RQ04912 1400 aa19.42■□□□□ 0.7
ERCC3-209ENST00000494464 PCGF6Q9BYE7 350 aa19.42■□□□□ 0.7
ERCC3-209ENST00000494464 NHSL1Q5SYE7 1610 aa19.4■□□□□ 0.7
ERCC3-209ENST00000494464 CDC42BPGQ6DT37 1551 aa19.38■□□□□ 0.69
ERCC3-209ENST00000494464 LRPPRCP42704 1394 aaKnown RBP19.37■□□□□ 0.69
ERCC3-209ENST00000494464 SHPRHQ149N8 1683 aa19.35■□□□□ 0.69
ERCC3-209ENST00000494464 ILDR2Q71H61 639 aa19.35■□□□□ 0.69
ERCC3-209ENST00000494464 ABCC11Q96J66 1382 aa19.35■□□□□ 0.69
ERCC3-209ENST00000494464 JCADQ9P266 1359 aa19.35■□□□□ 0.69
ERCC3-209ENST00000494464 BRINP3Q76B58 766 aa19.34■□□□□ 0.69
ERCC3-209ENST00000494464 YTHDC2Q9H6S0 1430 aaKnown RBP19.34■□□□□ 0.69
ERCC3-209ENST00000494464 C1orf167Q5SNV9 1468 aa19.33■□□□□ 0.68
ERCC3-209ENST00000494464 C14orf93Q9H972 538 aaKnown RBP19.32■□□□□ 0.68
ERCC3-209ENST00000494464 ADGRB1O14514 1584 aa19.3■□□□□ 0.68
ERCC3-209ENST00000494464 STAC3Q96MF2 364 aa19.3■□□□□ 0.68
ERCC3-209ENST00000494464 DLC1Q96QB1 1528 aa19.29■□□□□ 0.68
ERCC3-209ENST00000494464 TMEM132EQ6IEE7 984 aa19.29■□□□□ 0.68
ERCC3-209ENST00000494464 PHF23Q9BUL5 403 aaPredicted RBP19.29■□□□□ 0.68
ERCC3-209ENST00000494464 FMN2Q9NZ56 1722 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms